MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 100185 bp
Accession: NZ_CP056240 Location: 1..100185 Organism: Citrobacter freundii strain RHBSTW-00935 Replicon: plasmid pRHBSTW-00935_3
Accession: NZ_CP056240 Location: 1..100185 Organism: Citrobacter freundii strain RHBSTW-00935 Replicon: plasmid pRHBSTW-00935_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV330_RS25910 () | 41..451 | + | 411 | WP_044702888.1 | H-NS histone family protein | - |
| HV330_RS25915 () | 549..1811 | - | 1263 | WP_127785450.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HV330_RS25920 () | 1798..2235 | - | 438 | WP_049001160.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HV330_RS25925 () | 2482..2898 | - | 417 | WP_127785448.1 | hypothetical protein | - |
| HV330_RS25930 () | 3093..3353 | - | 261 | WP_127785446.1 | hypothetical protein | - |
| HV330_RS25935 () | 3432..3938 | - | 507 | WP_153983912.1 | hypothetical protein | - |
| HV330_RS25940 () | 4123..4359 | - | 237 | Protein_7 | hypothetical protein | - |
| HV330_RS25945 () | 4356..4577 | - | 222 | Protein_8 | hypothetical protein | - |
| HV330_RS25950 () | 5096..5356 | - | 261 | Protein_9 | ead/Ea22-like family protein | - |
| HV330_RS25955 () | 5362..5667 | - | 306 | WP_127785444.1 | hypothetical protein | - |
| HV330_RS25960 () | 5671..5958 | - | 288 | WP_044702780.1 | hypothetical protein | - |
| HV330_RS25965 () | 5971..6237 | - | 267 | WP_127785442.1 | hypothetical protein | - |
| HV330_RS25970 () | 6315..6791 | + | 477 | WP_153983887.1 | thermonuclease family protein | - |
| HV330_RS25975 () | 6831..7151 | + | 321 | WP_153983888.1 | hypothetical protein | - |
| HV330_RS25980 () | 7254..7460 | + | 207 | WP_127785436.1 | hypothetical protein | - |
| HV330_RS25985 () | 7479..7694 | + | 216 | WP_079939752.1 | hypothetical protein | - |
| HV330_RS25990 () | 7713..7919 | + | 207 | WP_079939751.1 | hypothetical protein | - |
| HV330_RS25995 () | 7937..8707 | - | 771 | WP_079939750.1 | tyrosine-type recombinase/integrase | - |
| HV330_RS26000 () | 8719..8991 | - | 273 | WP_127785434.1 | hypothetical protein | - |
| HV330_RS26005 () | 9019..9642 | - | 624 | WP_079939748.1 | hypothetical protein | - |
| HV330_RS26010 () | 9698..9934 | - | 237 | WP_044702766.1 | hypothetical protein | - |
| HV330_RS26015 () | 9990..10208 | - | 219 | WP_127785432.1 | hypothetical protein | - |
| HV330_RS26020 () | 10293..10580 | - | 288 | WP_044702764.1 | hypothetical protein | - |
| HV330_RS26025 () | 10645..11838 | - | 1194 | WP_153983913.1 | 3'-5' exonuclease | - |
| HV330_RS26030 () | 11887..12084 | - | 198 | WP_127785430.1 | hypothetical protein | - |
| HV330_RS26035 () | 12612..12776 | + | 165 | WP_153983889.1 | hypothetical protein | - |
| HV330_RS26040 () | 12769..13218 | + | 450 | WP_153983890.1 | hypothetical protein | - |
| HV330_RS26045 () | 13258..13674 | + | 417 | WP_049001208.1 | hypothetical protein | - |
| HV330_RS26050 () | 13746..14315 | - | 570 | WP_136138477.1 | hypothetical protein | - |
| HV330_RS26055 () | 14315..14662 | - | 348 | WP_049001214.1 | hypothetical protein | - |
| HV330_RS26060 () | 14941..16320 | + | 1380 | WP_044702757.1 | replicative DNA helicase | - |
| HV330_RS26065 () | 16333..16536 | + | 204 | WP_136138478.1 | transcriptional regulator | - |
| HV330_RS26070 () | 16814..17227 | - | 414 | WP_153983891.1 | hypothetical protein | - |
| HV330_RS26075 () | 17229..17738 | - | 510 | WP_136138480.1 | hypothetical protein | - |
| HV330_RS26080 () | 17735..18076 | - | 342 | WP_136138481.1 | hypothetical protein | - |
| HV330_RS26085 () | 18157..18345 | - | 189 | WP_136138482.1 | hypothetical protein | - |
| HV330_RS26090 () | 18447..22100 | - | 3654 | WP_153983893.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HV330_RS26095 () | 22100..23488 | - | 1389 | WP_136138512.1 | conjugal transfer protein TraH | - |
| HV330_RS26100 () | 23498..23968 | - | 471 | WP_136138484.1 | conjugal transfer protein TraF | - |
| HV330_RS26105 () | 23965..24792 | - | 828 | WP_153983894.1 | conjugal transfer protein TraF | - |
| HV330_RS26110 () | 24833..25330 | - | 498 | WP_044702825.1 | S26 family signal peptidase | - |
| HV330_RS26115 () | 25327..26067 | - | 741 | WP_153983895.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HV330_RS26120 () | 26064..26414 | - | 351 | WP_044702822.1 | hypothetical protein | - |
| HV330_RS26125 () | 26411..26824 | - | 414 | WP_049001237.1 | hypothetical protein | - |
| HV330_RS26130 () | 26867..28465 | - | 1599 | WP_044702821.1 | TraU family protein | - |
| HV330_RS26135 () | 28624..30222 | - | 1599 | WP_079939730.1 | conjugal transfer protein TraN | - |
| HV330_RS26140 () | 30235..32253 | - | 2019 | WP_044702819.1 | conjugal transfer protein TraN | - |
| HV330_RS26145 () | 32257..34791 | - | 2535 | WP_136138487.1 | TraC family protein | - |
| HV330_RS26150 () | 34791..35309 | - | 519 | WP_044702817.1 | TraV family lipoprotein | - |
| HV330_RS26155 () | 35309..36550 | - | 1242 | WP_136138488.1 | TraB/VirB10 family protein | - |
| HV330_RS26160 () | 36550..37344 | - | 795 | WP_136138489.1 | type-F conjugative transfer system secretin TraK | - |
| HV330_RS26165 () | 37378..38007 | - | 630 | WP_153983896.1 | hypothetical protein | - |
| HV330_RS26170 () | 38011..38292 | - | 282 | WP_127785393.1 | hypothetical protein | - |
| HV330_RS26175 () | 38305..38706 | - | 402 | WP_127785391.1 | conjugative transfer protein TraE | - |
| HV330_RS26180 () | 38721..39590 | - | 870 | WP_153983897.1 | DsbC family protein | - |
| HV330_RS26185 () | 39590..40044 | - | 455 | Protein_56 | hypothetical protein | - |
| HV330_RS26190 () | 40345..40671 | - | 327 | WP_044702807.1 | hypothetical protein | - |
| HV330_RS26195 () | 40751..41092 | - | 342 | WP_044702805.1 | hypothetical protein | - |
| HV330_RS26200 () | 41212..41487 | + | 276 | WP_044702803.1 | hypothetical protein | - |
| HV330_RS26205 () | 41704..42753 | + | 1050 | WP_049001248.1 | hypothetical protein | - |
| HV330_RS26210 () | 43679..43966 | - | 288 | Protein_61 | serine hydrolase | - |
| HV330_RS26215 () | 44243..44596 | + | 354 | WP_001114073.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| HV330_RS26220 () | 44644..45006 | + | 363 | WP_000783215.1 | arsenite efflux transporter metallochaperone ArsD | - |
| HV330_RS26225 () | 45024..46775 | + | 1752 | WP_001556710.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| HV330_RS26230 () | 46824..48113 | + | 1290 | WP_000922630.1 | arsenite efflux transporter membrane subunit ArsB | - |
| HV330_RS26235 () | 48126..48551 | + | 426 | WP_000065758.1 | glutaredoxin-dependent arsenate reductase | - |
| HV330_RS26240 () | 48582..48986 | - | 405 | WP_004118313.1 | arsenic transporter ATPase | - |
| HV330_RS26245 () | 48995..49567 | - | 573 | WP_001556711.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HV330_RS26250 () | 49731..52736 | + | 3006 | WP_022644723.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HV330_RS26255 () | 53291..53671 | - | 381 | WP_181502634.1 | hypothetical protein | - |
| HV330_RS26260 () | 53908..54768 | + | 861 | WP_044702628.1 | ParA family protein | - |
| HV330_RS26265 () | 54765..56123 | + | 1359 | WP_153983898.1 | hypothetical protein | - |
| HV330_RS26270 () | 56128..56832 | + | 705 | WP_079939721.1 | hypothetical protein | - |
| HV330_RS26275 () | 56838..57137 | - | 300 | WP_044702631.1 | hypothetical protein | - |
| HV330_RS26280 () | 57186..57701 | + | 516 | WP_079939720.1 | hypothetical protein | - |
| HV330_RS26285 () | 58648..58830 | + | 183 | WP_044702634.1 | hypothetical protein | - |
| HV330_RS26290 () | 58963..59379 | - | 417 | WP_153983899.1 | helix-turn-helix domain-containing protein | - |
| HV330_RS26295 () | 59376..59660 | - | 285 | WP_049001257.1 | hypothetical protein | - |
| HV330_RS26300 () | 59808..60203 | + | 396 | WP_079939718.1 | hypothetical protein | - |
| HV330_RS26305 () | 60230..60439 | + | 210 | WP_044702641.1 | hypothetical protein | - |
| HV330_RS26310 () | 60755..61825 | + | 1071 | WP_079939717.1 | DGQHR domain-containing protein | - |
| HV330_RS26315 () | 61874..62146 | + | 273 | WP_079939716.1 | hypothetical protein | - |
| HV330_RS26320 () | 62268..64277 | + | 2010 | WP_153983900.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| HV330_RS26325 () | 64346..64648 | + | 303 | WP_049001263.1 | hypothetical protein | - |
| HV330_RS26330 () | 64694..65446 | + | 753 | WP_127785381.1 | cell filamentation protein Fic | - |
| HV330_RS26335 () | 65466..65654 | + | 189 | WP_044702647.1 | hypothetical protein | - |
| HV330_RS26340 () | 65677..65874 | + | 198 | WP_044702648.1 | hypothetical protein | - |
| HV330_RS26345 () | 66540..66905 | + | 366 | WP_044702650.1 | hypothetical protein | - |
| HV330_RS26350 () | 67053..67496 | + | 444 | WP_044702652.1 | DNA repair protein RadC | - |
| HV330_RS26355 () | 67545..67817 | + | 273 | WP_153983903.1 | hypothetical protein | - |
| HV330_RS26360 () | 67866..68309 | + | 444 | WP_079939710.1 | hypothetical protein | - |
| HV330_RS26365 () | 68432..69100 | + | 669 | WP_153983914.1 | N-6 DNA methylase | - |
| HV330_RS26370 () | 69140..69310 | + | 171 | WP_179954915.1 | hypothetical protein | - |
| HV330_RS26375 () | 69560..69892 | + | 333 | WP_079939709.1 | Arc family DNA-binding protein | - |
| HV330_RS26380 () | 70167..70604 | + | 438 | WP_153983904.1 | hypothetical protein | - |
| HV330_RS26385 () | 70785..71240 | + | 456 | WP_079939771.1 | DUF1419 domain-containing protein | - |
| HV330_RS26390 () | 71309..71866 | + | 558 | WP_079939706.1 | hypothetical protein | - |
| HV330_RS26395 () | 72901..73332 | + | 432 | WP_079940151.1 | hypothetical protein | - |
| HV330_RS26400 () | 73516..73947 | + | 432 | WP_153983905.1 | antirestriction protein | - |
| HV330_RS26405 () | 73962..74312 | + | 351 | WP_079940149.1 | hypothetical protein | - |
| HV330_RS26410 () | 74326..74655 | + | 330 | WP_079940148.1 | hypothetical protein | - |
| HV330_RS26415 () | 74665..75039 | + | 375 | WP_079940147.1 | hypothetical protein | - |
| HV330_RS26420 () | 75029..75547 | + | 519 | WP_079940146.1 | hypothetical protein | - |
| HV330_RS26425 () | 75695..75976 | + | 282 | WP_044702669.1 | hypothetical protein | - |
| HV330_RS26430 () | 76083..76346 | + | 264 | WP_044702670.1 | DUF1380 family protein | - |
| HV330_RS26435 () | 76337..76567 | + | 231 | WP_044702671.1 | hypothetical protein | - |
| HV330_RS26440 () | 76820..77038 | + | 219 | WP_153983907.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| HV330_RS26445 () | 77384..77728 | + | 345 | WP_079940153.1 | type II toxin-antitoxin system PrlF family antitoxin | Antitoxin Detail |
| HV330_RS26450 () | 77753..78247 | + | 495 | WP_127785371.1 | type II toxin-antitoxin system YhaV family toxin | Toxin Detail |
| HV330_RS26455 () | 78974..79222 | + | 249 | WP_136138507.1 | hypothetical protein | - |
| HV330_RS26460 () | 79320..80000 | + | 681 | WP_153983908.1 | hypothetical protein | - |
| HV330_RS26465 () | 80069..80284 | + | 216 | WP_044702680.1 | hypothetical protein | - |
| HV330_RS26470 () | 80402..81250 | + | 849 | WP_044702681.1 | DUF4942 domain-containing protein | - |
| HV330_RS26475 () | 81410..82189 | + | 780 | WP_153983909.1 | hypothetical protein | - |
| HV330_RS26480 () | 82675..83223 | + | 549 | WP_127785946.1 | DUF1380 family protein | - |
| HV330_RS26485 () | 83927..84409 | - | 483 | WP_079940135.1 | hypothetical protein | - |
| HV330_RS26490 () | 84824..85690 | + | 867 | WP_127785948.1 | hypothetical protein | - |
| HV330_RS26495 () | 85931..86173 | - | 243 | WP_079940133.1 | hypothetical protein | - |
| HV330_RS26500 () | 86328..86555 | + | 228 | WP_181502635.1 | hypothetical protein | - |
| HV330_RS26505 () | 86612..86839 | + | 228 | WP_181502636.1 | hypothetical protein | - |
| HV330_RS26510 () | 86896..87123 | + | 228 | WP_181502636.1 | hypothetical protein | - |
| HV330_RS26515 () | 87180..87407 | + | 228 | WP_181502636.1 | hypothetical protein | - |
| HV330_RS26520 () | 87464..87691 | + | 228 | WP_181502636.1 | hypothetical protein | - |
| HV330_RS26525 () | 87748..87975 | + | 228 | WP_181502636.1 | hypothetical protein | - |
| HV330_RS26530 () | 88525..88875 | + | 351 | WP_127785465.1 | hypothetical protein | - |
| HV330_RS26535 () | 88878..91223 | + | 2346 | WP_127785463.1 | type IV secretion system DNA-binding domain-containing protein | - |
| HV330_RS26540 () | 91223..96232 | + | 5010 | WP_153983884.1 | Multifunctional conjugation protein TraI | Relaxase |
| HV330_RS26545 () | 96305..96517 | - | 213 | WP_003028810.1 | 50S ribosomal protein L31 | - |
| HV330_RS26550 () | 96705..97721 | - | 1017 | WP_153983885.1 | hypothetical protein | - |
| HV330_RS26555 () | 97735..98262 | - | 528 | WP_127785457.1 | restriction endonuclease | - |
| HV330_RS26560 () | 98262..98567 | - | 306 | WP_127785455.1 | hypothetical protein | - |
| HV330_RS26565 () | 98564..98938 | - | 375 | WP_127785452.1 | hypothetical protein | - |
| HV330_RS26570 () | 98935..99651 | - | 717 | WP_079939763.1 | transglycosylase SLT domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|