MGE detailed information
MGE type: Prophage MGE length: 63993 bp
Accession: NZ_CP056229 Location: 1924501..1988493 Organism: Citrobacter freundii strain RHBSTW-00968 Replicon: chromosome
Accession: NZ_CP056229 Location: 1924501..1988493 Organism: Citrobacter freundii strain RHBSTW-00968 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV337_RS09020 () | 1919572..1921215 | - | 1644 | WP_181491266.1 | EmmdR/YeeO family multidrug/toxin efflux MATE transporter | - |
| HV337_RS09030 () | 1921612..1922790 | - | 1179 | WP_146716936.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HV337_RS09035 () | 1922922..1923212 | + | 291 | WP_115258185.1 | DNA damage-inducible protein YebG | - |
| HV337_RS09040 () | 1923332..1923685 | + | 354 | WP_096756683.1 | hypothetical protein | - |
| HV337_RS09045 () | 1923779..1924438 | + | 660 | WP_096756684.1 | tellurite resistance TerB family protein | - |
| HV337_RS09050 () | 1924525..1926585 | + | 2061 | WP_096756685.1 | oligopeptidase B | - |
| HV337_RS09055 () | 1926582..1927244 | - | 663 | WP_096756686.1 | exodeoxyribonuclease X | - |
| HV337_RS09060 () | 1927268..1927924 | - | 657 | WP_181491267.1 | carbon-nitrogen hydrolase family protein | - |
| HV337_RS09065 () | 1928031..1928255 | - | 225 | WP_096756688.1 | DNA polymerase III subunit theta | - |
| HV337_RS09070 () | 1928400..1928774 | + | 375 | WP_115258189.1 | CopC domain-containing protein YobA | - |
| HV337_RS09075 () | 1928779..1929651 | + | 873 | WP_115258190.1 | copper homeostasis membrane protein CopD | - |
| HV337_RS09080 () | 1929668..1930006 | + | 339 | WP_181491268.1 | YebY family protein | - |
| - () | 1930036..1930269 | - | 234 | - | - | Antitoxin Detail |
| - () | 1930162..1930265 | + | 104 | - | - | Toxin Detail |
| HV337_RS09085 () | 1930343..1931428 | - | 1086 | WP_181491269.1 | hypothetical protein ; Integrase | Integrase |
| HV337_RS09090 () | 1931397..1931669 | - | 273 | WP_032170291.1 | excisionase | - |
| HV337_RS09095 () | 1931733..1931975 | - | 243 | WP_001237028.1 | DUF4060 family protein | - |
| HV337_RS09100 () | 1931962..1932165 | - | 204 | WP_103285408.1 | hypothetical protein | - |
| HV337_RS09105 () | 1932158..1932502 | - | 345 | WP_110497740.1 | hypothetical protein | - |
| HV337_RS09110 () | 1932537..1933649 | - | 1113 | WP_137398778.1 | recombinase RecT | - |
| HV337_RS09115 () | 1933661..1936489 | - | 2829 | WP_181491270.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| HV337_RS09120 () | 1936628..1936789 | - | 162 | WP_181491271.1 | hypothetical protein | - |
| HV337_RS09125 () | 1936801..1937007 | - | 207 | WP_032935469.1 | phage encoded cell division inhibitor protein | - |
| HV337_RS09130 () | 1937349..1937555 | + | 207 | WP_172625561.1 | hypothetical protein | - |
| HV337_RS09135 () | 1937587..1937967 | - | 381 | WP_096756849.1 | hypothetical protein | - |
| HV337_RS09140 () | 1938058..1938981 | - | 924 | WP_049041817.1 | hypothetical protein | - |
| HV337_RS09145 () | 1939149..1939871 | - | 723 | WP_049041815.1 | helix-turn-helix transcriptional regulator | - |
| HV337_RS09150 () | 1939940..1940167 | + | 228 | WP_016156713.1 | hypothetical protein | - |
| HV337_RS09155 () | 1940198..1940737 | + | 540 | WP_181491272.1 | toxin YdaT domain-containing protein | - |
| HV337_RS09160 () | 1940822..1941733 | + | 912 | WP_181491273.1 | replication protein | - |
| HV337_RS09165 () | 1941736..1942485 | + | 750 | WP_135911941.1 | ATP-binding protein | - |
| HV337_RS09170 () | 1942504..1942815 | + | 312 | WP_181491274.1 | hypothetical protein | - |
| HV337_RS09175 () | 1942812..1943276 | + | 465 | WP_181491465.1 | hypothetical protein | - |
| HV337_RS09180 () | 1943273..1943764 | + | 492 | WP_181491275.1 | hypothetical protein | - |
| HV337_RS09185 () | 1943761..1944360 | + | 600 | WP_181491276.1 | ead/Ea22-like family protein | - |
| HV337_RS09190 () | 1944493..1945518 | - | 1026 | WP_181491277.1 | hypothetical protein | - |
| HV337_RS09195 () | 1945924..1946217 | + | 294 | WP_181491278.1 | hypothetical protein | - |
| HV337_RS09200 () | 1946601..1946839 | + | 239 | Protein_1799 | DNA polymerase III subunit theta | - |
| HV337_RS09205 () | 1946836..1947372 | + | 537 | WP_181491279.1 | hypothetical protein | - |
| HV337_RS09210 () | 1947448..1948044 | + | 597 | WP_181491280.1 | DUF1367 family protein | - |
| HV337_RS09215 () | 1948044..1948249 | + | 206 | Protein_1802 | hypothetical protein | - |
| HV337_RS09220 () | 1948252..1948857 | + | 606 | WP_181491281.1 | recombination protein NinG | - |
| HV337_RS09225 () | 1949069..1949758 | + | 690 | WP_181491282.1 | antiterminator | - |
| HV337_RS09230 () | 1949875..1950477 | + | 603 | WP_181491283.1 | hypothetical protein | - |
| HV337_RS09235 () | 1950632..1951030 | + | 399 | WP_001294160.1 | membrane protein | - |
| HV337_RS09240 () | 1951027..1951302 | + | 276 | WP_071687785.1 | phage holin family protein | - |
| HV337_RS09245 () | 1951302..1951844 | + | 543 | WP_181491284.1 | glycoside hydrolase family 108 protein | - |
| HV337_RS09250 () | 1951841..1952113 | + | 273 | WP_181491285.1 | hypothetical protein | - |
| HV337_RS09255 () | 1952650..1953639 | + | 990 | WP_135911949.1 | terminase small subunit | - |
| HV337_RS09260 () | 1953617..1954924 | + | 1308 | WP_135911950.1 | terminase family protein | - |
| HV337_RS09265 () | 1954929..1956332 | + | 1404 | WP_135911951.1 | DUF4055 domain-containing protein | - |
| HV337_RS09270 () | 1956334..1957437 | + | 1104 | WP_135911952.1 | hypothetical protein | - |
| HV337_RS09275 () | 1957563..1958315 | + | 753 | WP_115258216.1 | hypothetical protein | - |
| HV337_RS09280 () | 1958332..1959468 | + | 1137 | WP_181491286.1 | P22 coat - protein 5 family protein | - |
| HV337_RS09285 () | 1959508..1959837 | + | 330 | WP_181491287.1 | hypothetical protein | - |
| HV337_RS09290 () | 1959840..1960322 | + | 483 | WP_181491288.1 | hypothetical protein | - |
| HV337_RS09295 () | 1960324..1960677 | + | 354 | WP_181491289.1 | hypothetical protein | - |
| HV337_RS09300 () | 1960680..1961279 | + | 600 | WP_181491290.1 | hypothetical protein | - |
| HV337_RS09305 () | 1961269..1961718 | + | 450 | WP_181491291.1 | DUF4128 domain-containing protein | - |
| HV337_RS09310 () | 1961765..1962697 | + | 933 | WP_181491292.1 | immunoglobulin domain-containing protein | - |
| HV337_RS09315 () | 1962739..1963077 | + | 339 | WP_181491293.1 | hypothetical protein | - |
| HV337_RS09320 () | 1963095..1963382 | + | 288 | WP_181491294.1 | DUF1799 domain-containing protein | - |
| HV337_RS09325 () | 1963382..1966744 | + | 3363 | WP_181491295.1 | phage tail tape measure protein | - |
| HV337_RS09330 () | 1966841..1967269 | + | 429 | WP_181491296.1 | hypothetical protein | - |
| HV337_RS09335 () | 1967736..1967915 | + | 180 | WP_016156674.1 | hypothetical protein | - |
| HV337_RS09340 () | 1967926..1968423 | + | 498 | WP_135911961.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| HV337_RS09345 () | 1968501..1968851 | + | 351 | WP_181491297.1 | phage tail protein | - |
| HV337_RS09350 () | 1968851..1969621 | + | 771 | WP_168246954.1 | phage minor tail protein L | - |
| HV337_RS09355 () | 1969634..1970365 | + | 732 | WP_135911964.1 | C40 family peptidase | - |
| HV337_RS09360 () | 1970353..1970946 | + | 594 | WP_135911965.1 | tail assembly protein | - |
| HV337_RS09365 () | 1971045..1971842 | + | 798 | WP_032943626.1 | hypothetical protein | - |
| HV337_RS09370 () | 1971891..1975100 | + | 3210 | WP_181491298.1 | DUF1983 domain-containing protein | - |
| HV337_RS09375 () | 1975428..1976090 | + | 663 | WP_181491299.1 | hypothetical protein | - |
| HV337_RS09380 () | 1976495..1977694 | + | 1200 | WP_181491300.1 | tail fiber domain-containing protein | - |
| HV337_RS09385 () | 1977872..1978114 | - | 243 | WP_181491301.1 | DinI family protein | - |
| HV337_RS09390 () | 1978208..1978288 | - | 81 | Protein_1837 | DinI family protein | - |
| HV337_RS09395 () | 1978435..1978824 | + | 390 | WP_181491302.1 | LexA family transcriptional regulator | - |
| HV337_RS09405 () | 1979179..1980069 | + | 891 | WP_044375043.1 | HTH-type transcriptional regulator PgrR | VF |
| HV337_RS09410 () | 1980337..1981320 | + | 984 | WP_167394281.1 | alpha/beta hydrolase | - |
| HV337_RS09415 () | 1981333..1982451 | + | 1119 | WP_063863504.1 | NADH-dependent flavin oxidoreductase | - |
| HV337_RS09420 () | 1983087..1983728 | + | 642 | WP_181491303.1 | protein-serine/threonine phosphatase | - |
| HV337_RS09425 () | 1983729..1983920 | - | 192 | WP_045444034.1 | YebW family protein | - |
| HV337_RS09430 () | 1984023..1984259 | - | 237 | WP_161959030.1 | DUF1480 family protein | - |
| HV337_RS09435 () | 1984360..1985781 | - | 1422 | WP_181491304.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HV337_RS09440 () | 1985860..1988493 | - | 2634 | WP_137399983.1 | hypothetical protein | VF |
| HV337_RS09445 () | 1988462..1989745 | - | 1284 | WP_181491305.1 | membrane integrity lipid transport subunit YebS | - |
| HV337_RS09450 () | 1989874..1990371 | + | 498 | WP_096756696.1 | GAF domain-containing protein | - |
| HV337_RS09455 () | 1990468..1991154 | + | 687 | WP_096756697.1 | RNA chaperone ProQ | - |
| HV337_RS09460 () | 1991174..1993222 | + | 2049 | WP_181491306.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|