MGE detailed information
MGE type: Genomic_island MGE length: 30131 bp
Accession: NZ_CP056180 Location: 4259192..4289322 Organism: Citrobacter sp. RHBSTW-01044 Replicon: chromosome
Accession: NZ_CP056180 Location: 4259192..4289322 Organism: Citrobacter sp. RHBSTW-01044 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV352_RS20415 () | 4254340..4255605 | - | 1266 | WP_016151548.1 | aromatic amino acid transporter | - |
| HV352_RS20420 () | 4255794..4257164 | - | 1371 | WP_016151547.1 | tyrosine phenol-lyase | - |
| HV352_RS20425 () | 4257943..4258305 | + | 363 | WP_047358401.1 | endoribonuclease SymE | - |
| HV352_RS20430 () | 4258368..4258853 | - | 486 | WP_016151545.1 | type VI secretion system tube protein Hcp | - |
| HV352_RS20435 () | 4258872..4259198 | - | 327 | WP_181635030.1 | DUF1493 family protein | - |
| HV352_RS20440 () | 4259192..4259641 | - | 450 | WP_003830103.1 | hypothetical protein | - |
| HV352_RS20445 () | 4259900..4260772 | + | 873 | WP_103283443.1 | HNH endonuclease | - |
| HV352_RS20450 () | 4260972..4261808 | - | 837 | WP_181635031.1 | DUF4942 domain-containing protein | - |
| HV352_RS20455 () | 4261922..4262242 | - | 321 | WP_181635032.1 | TA system toxin CbtA family protein | Toxin Detail |
| HV352_RS20460 () | 4262284..4262640 | - | 357 | WP_181635033.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HV352_RS20465 () | 4262672..4262893 | - | 222 | WP_181635034.1 | DUF987 family protein | - |
| HV352_RS20470 () | 4262902..4263372 | - | 471 | WP_181635035.1 | DNA repair protein RadC | - |
| HV352_RS20475 () | 4263442..4264263 | - | 822 | WP_181635036.1 | DUF945 domain-containing protein | - |
| HV352_RS20480 () | 4264336..4264785 | - | 450 | WP_181635037.1 | hypothetical protein | - |
| HV352_RS20485 () | 4265028..4265831 | - | 804 | WP_181635038.1 | hypothetical protein | - |
| HV352_RS20490 () | 4265851..4266285 | - | 435 | WP_181635039.1 | hypothetical protein | - |
| HV352_RS20495 () | 4266658..4267869 | - | 1212 | WP_181635040.1 | hypothetical protein | - |
| HV352_RS20500 () | 4268234..4268440 | + | 207 | WP_181635041.1 | AlpA family phage regulatory protein | - |
| HV352_RS20505 () | 4268714..4269757 | + | 1044 | WP_181635042.1 | inovirus-type Gp2 protein | - |
| HV352_RS20510 () | 4269840..4270262 | + | 423 | WP_181635043.1 | hypothetical protein | - |
| HV352_RS20515 () | 4270392..4271744 | + | 1353 | WP_181635044.1 | DUF1173 family protein | - |
| HV352_RS20520 () | 4272264..4273010 | + | 747 | WP_048222208.1 | HNH endonuclease | - |
| HV352_RS20525 () | 4273093..4275165 | + | 2073 | WP_181635045.1 | AAA family ATPase | - |
| HV352_RS20530 () | 4275176..4277098 | + | 1923 | WP_181635046.1 | UvrD-helicase domain-containing protein | - |
| HV352_RS20535 () | 4277327..4277947 | + | 621 | WP_181635047.1 | poly-gamma-glutamate hydrolase family protein | - |
| HV352_RS20540 () | 4278201..4281092 | + | 2892 | WP_181635048.1 | DEAD/DEAH box helicase family protein | - |
| HV352_RS20545 () | 4281113..4284259 | + | 3147 | WP_181635049.1 | site-specific DNA-methyltransferase | - |
| HV352_RS20550 () | 4284262..4287639 | + | 3378 | WP_181635050.1 | DEAD/DEAH box helicase family protein | - |
| HV352_RS20555 () | 4287690..4287992 | - | 303 | WP_181635051.1 | hypothetical protein | - |
| HV352_RS20560 () | 4288066..4289322 | - | 1257 | WP_181635052.1 | hypothetical protein ; Integrase | Integrase |
| HV352_RS20570 () | 4289827..4290846 | + | 1020 | WP_016155584.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| HV352_RS20575 () | 4290877..4291398 | - | 522 | WP_049268591.1 | gluconokinase | - |
| HV352_RS20580 () | 4291616..4292659 | + | 1044 | WP_181635053.1 | L-idonate 5-dehydrogenase | - |
| HV352_RS20585 () | 4292671..4293435 | + | 765 | WP_016151510.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|