MGE detailed information
MGE type: Prophage MGE length: 44792 bp
Accession: NZ_CP056165 Location: 2452419..2497210 Organism: Escherichia marmotae strain RHBSTW-00777 Replicon: chromosome
Accession: NZ_CP056165 Location: 2452419..2497210 Organism: Escherichia marmotae strain RHBSTW-00777 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV276_RS11635 () | 2448510..2449082 | - | 573 | WP_001220161.1 | cytolethal distending toxin type IV subunit CdtC | - |
| HV276_RS11640 () | 2449079..2449900 | - | 822 | WP_000734594.1 | cytolethal distending toxin type IV nuclease subunit CdtB | - |
| HV276_RS11645 () | 2449897..2450610 | - | 714 | WP_000358617.1 | cytolethal distending toxin type IV subunit CdtA | - |
| HV276_RS11650 () | 2451123..2451413 | - | 291 | WP_000355611.1 | hypothetical protein | - |
| HV276_RS11655 () | 2451424..2452128 | - | 705 | WP_000235972.1 | tail fiber domain-containing protein | - |
| HV276_RS11660 () | 2452138..2452419 | - | 282 | WP_000654144.1 | hypothetical protein | - |
| HV276_RS11665 () | 2452419..2454794 | - | 2376 | WP_024179262.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HV276_RS11670 () | 2454859..2455458 | - | 600 | WP_001228229.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| HV276_RS11675 () | 2455526..2458924 | - | 3399 | WP_181502700.1 | host specificity protein J | - |
| HV276_RS11680 () | 2458985..2459632 | - | 648 | WP_011703559.1 | tail assembly protein | - |
| HV276_RS11685 () | 2459530..2460273 | - | 744 | WP_000194743.1 | C40 family peptidase | - |
| HV276_RS11690 () | 2460278..2460976 | - | 699 | WP_001152480.1 | phage minor tail protein L | - |
| HV276_RS11695 () | 2460976..2461314 | - | 339 | WP_000024053.1 | phage tail protein | - |
| HV276_RS11700 () | 2461307..2464540 | - | 3234 | WP_115763392.1 | phage tail tape measure protein | - |
| HV276_RS11705 () | 2465012..2465371 | - | 360 | WP_122984268.1 | hypothetical protein | - |
| HV276_RS11710 () | 2465522..2466484 | - | 963 | WP_001516456.1 | hypothetical protein | - |
| HV276_RS11715 () | 2466511..2466903 | - | 393 | WP_001526972.1 | hypothetical protein | - |
| HV276_RS11720 () | 2466900..2467280 | - | 381 | WP_024008690.1 | hypothetical protein | - |
| HV276_RS11725 () | 2467281..2467664 | - | 384 | WP_115763391.1 | glutamate 5-kinase | - |
| HV276_RS11730 () | 2467664..2468059 | - | 396 | WP_000634214.1 | hypothetical protein | - |
| HV276_RS11735 () | 2468063..2468239 | - | 177 | WP_000908084.1 | hypothetical protein | - |
| HV276_RS11740 () | 2468282..2469421 | - | 1140 | WP_001526967.1 | hypothetical protein | - |
| HV276_RS11745 () | 2469520..2470284 | - | 765 | WP_000770040.1 | hypothetical protein | - |
| HV276_RS11750 () | 2470389..2471501 | - | 1113 | WP_024234576.1 | hypothetical protein | - |
| HV276_RS11755 () | 2471485..2472891 | - | 1407 | WP_024008689.1 | DUF4055 domain-containing protein | - |
| HV276_RS11760 () | 2472894..2474195 | - | 1302 | WP_105279859.1 | terminase family protein | - |
| HV276_RS11765 () | 2474176..2475270 | - | 1095 | WP_000089437.1 | terminase small subunit | - |
| HV276_RS11770 () | 2475274..2475525 | - | 252 | WP_000613571.1 | hypothetical protein | - |
| HV276_RS11775 () | 2475461..2476393 | - | 933 | WP_001204031.1 | hypothetical protein | - |
| HV276_RS11780 () | 2476386..2477177 | - | 792 | WP_001516459.1 | ParB/Srx family N-terminal domain-containing protein | - |
| HV276_RS11785 () | 2477315..2478772 | - | 1458 | WP_001097899.1 | Trk system potassium transporter TrkG | - |
| HV276_RS11790 () | 2478969..2479154 | - | 186 | WP_001228693.1 | Rz1 family lipoprotein | - |
| HV276_RS11795 () | 2479371..2479868 | - | 498 | WP_001135280.1 | lysozyme RrrD | - |
| HV276_RS11800 () | 2479868..2480083 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| HV276_RS11815 () | 2481376..2481912 | - | 537 | WP_000640127.1 | DUF1133 family protein | - |
| HV276_RS11820 () | 2481909..2482199 | - | 291 | WP_000228029.1 | DUF1364 domain-containing protein | - |
| HV276_RS11825 () | 2482199..2482798 | - | 600 | WP_000940343.1 | DUF1367 family protein | - |
| HV276_RS11830 () | 2483306..2483791 | - | 486 | WP_000818163.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| HV276_RS11835 () | 2483810..2483989 | - | 180 | WP_000119355.1 | hypothetical protein | - |
| HV276_RS11840 () | 2484198..2484410 | - | 213 | Protein_2313 | type I toxin-antitoxin system Hok family toxin | - |
| HV276_RS11845 () | 2484592..2485257 | - | 666 | WP_021554705.1 | epoxyqueuosine reductase QueH | - |
| HV276_RS11850 () | 2485442..2485858 | - | 417 | WP_001151236.1 | DUF977 family protein | - |
| HV276_RS11855 () | 2485874..2486635 | - | 762 | WP_000450696.1 | DUF1627 domain-containing protein | - |
| HV276_RS11860 () | 2486658..2487404 | - | 747 | WP_000789010.1 | ATP-binding protein | - |
| HV276_RS11865 () | 2487411..2488205 | - | 795 | WP_021568026.1 | hypothetical protein | - |
| HV276_RS11870 () | 2488284..2488706 | - | 423 | WP_000702029.1 | hypothetical protein | - |
| HV276_RS11875 () | 2488703..2488945 | - | 243 | WP_001033914.1 | helix-turn-helix domain-containing protein | - |
| HV276_RS11880 () | 2489042..2489461 | + | 420 | WP_000410102.1 | helix-turn-helix domain-containing protein | - |
| HV276_RS11885 () | 2489910..2490065 | + | 156 | WP_001169151.1 | YdaF family protein | - |
| HV276_RS11890 () | 2490062..2490550 | - | 489 | WP_014639167.1 | superinfection exclusion B family protein | - |
| HV276_RS11895 () | 2490981..2491202 | + | 222 | WP_000560230.1 | killing protein KilR | - |
| HV276_RS11900 () | 2491196..2491372 | + | 177 | WP_000245522.1 | hypothetical protein | - |
| HV276_RS11905 () | 2491447..2491722 | + | 276 | WP_001516463.1 | phage protein | - |
| HV276_RS11910 () | 2491824..2494424 | + | 2601 | WP_115763388.1 | exodeoxyribonuclease VIII | - |
| HV276_RS11915 () | 2494417..2495226 | + | 810 | WP_000166319.1 | recombination protein RecT | - |
| HV276_RS11920 () | 2495283..2495477 | + | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| HV276_RS11925 () | 2495470..2495658 | + | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 2495476..2495654 | - | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2495476..2495654 | - | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2495476..2495654 | - | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2495476..2495654 | - | 179 | NuclAT_0 | - | Antitoxin Detail |
| HV276_RS11930 () | 2495758..2495973 | + | 216 | WP_000079604.1 | excisionase XisR | - |
| HV276_RS11935 () | 2495975..2497210 | + | 1236 | WP_001516465.1 | site-specific integrase | - |
| HV276_RS11940 () | 2497262..2498197 | + | 936 | WP_001516466.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| HV276_RS11945 () | 2498292..2499665 | - | 1374 | WP_105224583.1 | ATP-dependent RNA helicase DbpA | - |
| HV276_RS11950 () | 2499695..2499868 | - | 174 | WP_001296046.1 | hypothetical protein | - |
| HV276_RS11955 () | 2500143..2501126 | - | 984 | WP_000452014.1 | zinc transporter ZntB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|