MGE detailed information
MGE type: Prophage MGE length: 84343 bp
Accession: NZ_CP056165 Location: 1995280..2079622 Organism: Escherichia marmotae strain RHBSTW-00777 Replicon: chromosome
Accession: NZ_CP056165 Location: 1995280..2079622 Organism: Escherichia marmotae strain RHBSTW-00777 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV276_RS09315 () | 1990438..1991250 | - | 813 | WP_000101053.1 | septum site-determining protein MinD | - |
| HV276_RS09320 () | 1991274..1991969 | - | 696 | WP_038355935.1 | septum site-determining protein MinC | - |
| HV276_RS09325 () | 1992098..1992391 | + | 294 | WP_001516252.1 | YcgL domain-containing protein | - |
| HV276_RS09330 () | 1992463..1993122 | + | 660 | WP_000284291.1 | fumarylacetoacetate hydrolase family protein | - |
| HV276_RS09335 () | 1993199..1993660 | + | 462 | WP_181503339.1 | YcgN family cysteine cluster protein | - |
| HV276_RS09340 () | 1994498..1995283 | - | 786 | WP_000571466.1 | zinc ABC transporter permease subunit ZnuB | - |
| HV276_RS09345 () | 1995280..1996035 | - | 756 | WP_001516255.1 | Zinc import ATP-binding protein ZnuC | VF |
| HV276_RS09350 () | 1996114..1997046 | + | 933 | WP_010376204.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| HV276_RS09355 () | 1997062..1998384 | + | 1323 | WP_001184055.1 | murein DD-endopeptidase MepM | - |
| HV276_RS09360 () | 1998503..1999474 | + | 972 | WP_001516257.1 | Lipid A biosynthesis myristoyltransferase | VF |
| HV276_RS09365 () | 1999629..2001071 | - | 1443 | WP_000091161.1 | pyruvate kinase | - |
| HV276_RS09370 () | 2001198..2002067 | - | 870 | WP_105224300.1 | DNA-binding transcriptional regulator HexR | - |
| HV276_RS09375 () | 2002090..2002389 | + | 300 | WP_000155615.1 | hypothetical protein | - |
| HV276_RS09380 () | 2002405..2003880 | + | 1476 | WP_000301721.1 | glucose-6-phosphate dehydrogenase | - |
| HV276_RS09385 () | 2004115..2005926 | + | 1812 | WP_001516259.1 | phosphogluconate dehydratase | - |
| HV276_RS09390 () | 2005964..2006605 | + | 642 | WP_000800529.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HV276_RS09395 () | 2006661..2007839 | - | 1179 | WP_001516260.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HV276_RS09400 () | 2007981..2008271 | + | 291 | WP_000257577.1 | DNA damage-inducible protein YebG | - |
| HV276_RS09405 () | 2008338..2008694 | + | 357 | WP_001516261.1 | protein YebF | - |
| HV276_RS09410 () | 2009001..2009660 | + | 660 | WP_000024720.1 | tellurite resistance TerB family protein | - |
| HV276_RS09415 () | 2009869..2011929 | + | 2061 | WP_016248631.1 | oligopeptidase B | - |
| HV276_RS09420 () | 2011926..2012588 | - | 663 | WP_000944296.1 | exodeoxyribonuclease X | - |
| HV276_RS09425 () | 2012613..2013269 | - | 657 | WP_000122137.1 | carbon-nitrogen hydrolase family protein | - |
| HV276_RS09430 () | 2013370..2013600 | - | 231 | WP_000916764.1 | DNA polymerase III subunit theta | - |
| HV276_RS09435 () | 2013739..2014113 | + | 375 | WP_181503283.1 | CopC domain-containing protein YobA | - |
| HV276_RS09440 () | 2014117..2014989 | + | 873 | WP_000879335.1 | copper homeostasis membrane protein CopD | - |
| HV276_RS09445 () | 2015002..2015343 | + | 342 | WP_000976465.1 | YebY family protein | - |
| HV276_RS09450 () | 2015736..2016812 | - | 1077 | WP_001189094.1 | hypothetical protein ; Integrase | Integrase |
| HV276_RS09455 () | 2016778..2017059 | - | 282 | WP_001311878.1 | excisionase | - |
| HV276_RS09460 () | 2017166..2017330 | - | 165 | Protein_1842 | double-strand break reduction protein RcbA | - |
| - () | 2017170..2017332 | + | 163 | NuclAT_1 | - | Antitoxin Detail |
| - () | 2017170..2017332 | + | 163 | NuclAT_1 | - | Antitoxin Detail |
| - () | 2017170..2017332 | + | 163 | NuclAT_1 | - | Antitoxin Detail |
| - () | 2017170..2017332 | + | 163 | NuclAT_1 | - | Antitoxin Detail |
| HV276_RS09465 () | 2017276..2017518 | - | 243 | WP_181503340.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| HV276_RS09470 () | 2017551..2018231 | - | 681 | WP_181503284.1 | YqaJ viral recombinase family protein | - |
| HV276_RS09475 () | 2018228..2019013 | - | 786 | WP_181503285.1 | phage recombination protein Bet | - |
| HV276_RS09480 () | 2019019..2019315 | - | 297 | WP_181503341.1 | host-nuclease inhibitor protein Gam | - |
| HV276_RS09485 () | 2019293..2021320 | - | 2028 | WP_181503286.1 | exonuclease | - |
| HV276_RS09490 () | 2021344..2021640 | - | 297 | WP_000022247.1 | hypothetical protein | - |
| HV276_RS09495 () | 2021715..2021891 | - | 177 | WP_000245534.1 | hypothetical protein | - |
| HV276_RS09500 () | 2021885..2022106 | - | 222 | WP_000560220.1 | killing protein KilR | - |
| HV276_RS09505 () | 2022605..2022883 | + | 279 | WP_134873539.1 | hypothetical protein | - |
| HV276_RS09510 () | 2022915..2023214 | - | 300 | WP_000494027.1 | hypothetical protein | - |
| HV276_RS09515 () | 2023454..2023918 | - | 465 | WP_181503287.1 | helix-turn-helix domain-containing protein | - |
| HV276_RS09520 () | 2024023..2024298 | + | 276 | WP_040092189.1 | helix-turn-helix domain-containing protein | - |
| HV276_RS09525 () | 2024282..2024704 | + | 423 | WP_181503288.1 | hypothetical protein | - |
| HV276_RS09530 () | 2024724..2025137 | + | 414 | WP_040092190.1 | hypothetical protein | - |
| HV276_RS09535 () | 2025647..2026561 | + | 915 | WP_181503342.1 | hypothetical protein | - |
| HV276_RS09540 () | 2026473..2027015 | + | 543 | WP_181503289.1 | replication protein | - |
| HV276_RS09545 () | 2027048..2027785 | + | 738 | WP_181503343.1 | DUF1627 domain-containing protein | - |
| HV276_RS09550 () | 2027778..2028053 | + | 276 | Protein_1860 | hypothetical protein | - |
| HV276_RS09555 () | 2028418..2028606 | + | 189 | WP_181503344.1 | hypothetical protein | - |
| HV276_RS09560 () | 2028728..2029039 | + | 312 | WP_181503290.1 | hypothetical protein | - |
| HV276_RS09565 () | 2029173..2029727 | - | 555 | WP_001033798.1 | hypothetical protein | - |
| HV276_RS09570 () | 2029724..2030656 | - | 933 | WP_181503291.1 | hypothetical protein | - |
| HV276_RS09575 () | 2031048..2031203 | + | 156 | WP_000813269.1 | type I toxin-antitoxin system toxin HokD | - |
| HV276_RS09580 () | 2031453..2031626 | + | 174 | WP_000687447.1 | hypothetical protein | - |
| HV276_RS09585 () | 2031686..2032285 | + | 600 | WP_181503292.1 | DUF1367 family protein | - |
| HV276_RS09590 () | 2032285..2032575 | + | 291 | WP_000228022.1 | DUF1364 domain-containing protein | - |
| HV276_RS09595 () | 2032572..2033114 | + | 543 | WP_181503293.1 | DUF1133 family protein | - |
| HV276_RS09600 () | 2033393..2033818 | + | 426 | WP_032239021.1 | tellurite resistance TerB family protein | - |
| HV276_RS09605 () | 2033815..2033967 | + | 153 | WP_000833645.1 | DUF3927 family protein | - |
| HV276_RS09610 () | 2034057..2034449 | + | 393 | WP_001542811.1 | hypothetical protein | - |
| HV276_RS09615 () | 2034439..2034714 | + | 276 | WP_000950567.1 | phage holin family protein | - |
| HV276_RS09620 () | 2034717..2035094 | + | 378 | WP_061362016.1 | M15 family metallopeptidase | - |
| HV276_RS09625 () | 2035165..2035446 | + | 282 | WP_074459337.1 | hypothetical protein | - |
| HV276_RS09630 () | 2035577..2035690 | + | 114 | WP_001305859.1 | hypothetical protein | - |
| HV276_RS09635 () | 2035719..2035874 | + | 156 | WP_164839673.1 | hypothetical protein | - |
| HV276_RS09640 () | 2036049..2036345 | + | 297 | WP_001542813.1 | hypothetical protein | - |
| HV276_RS09645 () | 2036508..2037647 | + | 1140 | WP_181503294.1 | terminase small subunit | - |
| HV276_RS09650 () | 2037637..2038965 | + | 1329 | WP_181479232.1 | terminase | - |
| HV276_RS09655 () | 2038984..2040420 | + | 1437 | WP_181503295.1 | DUF1073 domain-containing protein | - |
| HV276_RS09660 () | 2040365..2041198 | + | 834 | WP_001018390.1 | hypothetical protein | - |
| HV276_RS09665 () | 2041179..2042501 | + | 1323 | WP_181503296.1 | DUF2213 domain-containing protein | - |
| HV276_RS09670 () | 2042494..2043111 | + | 618 | WP_085446523.1 | hypothetical protein | - |
| HV276_RS09675 () | 2043126..2044154 | + | 1029 | WP_105269286.1 | hypothetical protein | - |
| HV276_RS09680 () | 2044212..2044682 | + | 471 | WP_000780863.1 | hypothetical protein | - |
| HV276_RS09685 () | 2044682..2045122 | + | 441 | WP_000175376.1 | hypothetical protein | - |
| HV276_RS09690 () | 2045119..2045559 | + | 441 | WP_040092214.1 | hypothetical protein | - |
| HV276_RS09695 () | 2045546..2046490 | + | 945 | WP_097450078.1 | hypothetical protein | - |
| HV276_RS09700 () | 2046490..2047827 | + | 1338 | WP_181503297.1 | hypothetical protein | - |
| HV276_RS09705 () | 2047851..2048282 | + | 432 | WP_000613368.1 | hypothetical protein | - |
| HV276_RS09710 () | 2048279..2048896 | + | 618 | WP_000703983.1 | hypothetical protein | - |
| HV276_RS09715 () | 2048961..2051060 | + | 2100 | WP_181503298.1 | lytic transglycosylase domain-containing protein | - |
| HV276_RS09720 () | 2051063..2051716 | + | 654 | WP_181503299.1 | hypothetical protein | - |
| HV276_RS09725 () | 2051727..2051993 | + | 267 | WP_181503300.1 | hypothetical protein | - |
| HV276_RS09730 () | 2051993..2053000 | + | 1008 | WP_001271157.1 | hypothetical protein | - |
| HV276_RS09735 () | 2053015..2053728 | + | 714 | WP_001307783.1 | hypothetical protein | - |
| HV276_RS09740 () | 2054045..2054392 | + | 348 | WP_063102640.1 | hypothetical protein | - |
| HV276_RS09745 () | 2054368..2054925 | - | 558 | WP_181503301.1 | antA/AntB antirepressor family protein | - |
| HV276_RS09750 () | 2055199..2055801 | - | 603 | WP_181503302.1 | hypothetical protein | - |
| HV276_RS09755 () | 2055829..2057055 | + | 1227 | WP_001307784.1 | baseplate J/gp47 family protein | - |
| HV276_RS09760 () | 2057039..2057665 | + | 627 | WP_001199729.1 | hypothetical protein | - |
| HV276_RS09765 () | 2057662..2059101 | + | 1440 | WP_181503303.1 | phage tail protein | - |
| HV276_RS09770 () | 2059104..2059649 | + | 546 | WP_000902891.1 | tail fiber assembly protein | - |
| HV276_RS09775 () | 2059673..2062810 | + | 3138 | WP_181503304.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HV276_RS09780 () | 2062825..2063397 | + | 573 | WP_105268945.1 | DUF4376 domain-containing protein | - |
| HV276_RS09785 () | 2063880..2064536 | + | 657 | WP_000806226.1 | protein-serine/threonine phosphatase | - |
| HV276_RS09790 () | 2064537..2064728 | - | 192 | WP_001516263.1 | YebW family protein | - |
| HV276_RS09795 () | 2064833..2065069 | - | 237 | WP_001516264.1 | DUF1480 family protein | - |
| HV276_RS09800 () | 2065185..2066624 | - | 1440 | WP_061090891.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HV276_RS09805 () | 2066704..2069337 | - | 2634 | WP_000076949.1 | hypothetical protein | VF |
| HV276_RS09810 () | 2069306..2070589 | - | 1284 | WP_001516266.1 | membrane integrity lipid transport subunit YebS | - |
| HV276_RS09815 () | 2070719..2071216 | + | 498 | WP_001043873.1 | L-methionine (R)-S-oxide reductase | - |
| HV276_RS09820 () | 2071313..2072011 | + | 699 | WP_000431382.1 | RNA chaperone ProQ | - |
| HV276_RS09825 () | 2072031..2074079 | + | 2049 | WP_001055772.1 | carboxy terminal-processing peptidase | - |
| HV276_RS09830 () | 2074271..2075152 | + | 882 | WP_000984500.1 | protease HtpX | - |
| HV276_RS09835 () | 2075199..2076572 | - | 1374 | WP_010376166.1 | MFS transporter | - |
| HV276_RS09840 () | 2076749..2077540 | + | 792 | WP_001262177.1 | DNA-binding transcriptional regulator KdgR | - |
| HV276_RS09845 () | 2077695..2077934 | - | 240 | WP_001211005.1 | membrane protein | - |
| HV276_RS09850 () | 2078092..2078235 | + | 144 | WP_000714549.1 | PhoP/PhoQ regulator MgrB | - |
| HV276_RS09855 () | 2078310..2078597 | + | 288 | WP_001006870.1 | YebO family protein | - |
| HV276_RS09860 () | 2079257..2079373 | + | 117 | WP_032141266.1 | YobF family protein | - |
| HV276_RS09865 () | 2079413..2079622 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| HV276_RS09870 () | 2079789..2080598 | + | 810 | WP_000010094.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| HV276_RS09875 () | 2080595..2081161 | - | 567 | WP_001027737.1 | manganese efflux pump MntP | - |
| HV276_RS09880 () | 2081579..2082037 | - | 459 | WP_000156311.1 | DUF986 family protein | - |
| HV276_RS09885 () | 2082092..2082943 | - | 852 | WP_001516270.1 | PTS mannose transporter subunit IID | - |
| HV276_RS09890 () | 2082956..2083756 | - | 801 | WP_000406934.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|