MGE detailed information
MGE type: Prophage MGE length: 45833 bp
Accession: NZ_CP056159 Location: 727403..773235 Organism: Escherichia marmotae strain RHBSTW-00814 Replicon: chromosome
Accession: NZ_CP056159 Location: 727403..773235 Organism: Escherichia marmotae strain RHBSTW-00814 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV284_RS03640 () | 723739..724311 | - | 573 | WP_001526988.1 | cytolethal distending toxin type IV subunit CdtC | - |
| HV284_RS03645 () | 724308..725129 | - | 822 | WP_000734594.1 | cytolethal distending toxin type IV nuclease subunit CdtB | - |
| HV284_RS03650 () | 725126..725839 | - | 714 | WP_001526986.1 | cytolethal distending toxin type IV subunit CdtA | - |
| HV284_RS03655 () | 726519..727121 | - | 603 | Protein_723 | tail fiber domain-containing protein | - |
| HV284_RS03660 () | 727134..727403 | - | 270 | WP_001544317.1 | hypothetical protein | - |
| HV284_RS03665 () | 727403..729760 | - | 2358 | WP_181474743.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HV284_RS03670 () | 729825..730424 | - | 600 | WP_021522083.1 | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | VF |
| HV284_RS03675 () | 730492..733974 | - | 3483 | WP_181474744.1 | host specificity protein J | - |
| HV284_RS03680 () | 734036..734683 | - | 648 | WP_011703559.1 | tail assembly protein | - |
| HV284_RS03685 () | 734581..735324 | - | 744 | WP_181474745.1 | C40 family peptidase | - |
| HV284_RS03690 () | 735329..736027 | - | 699 | WP_001526979.1 | phage minor tail protein L | - |
| HV284_RS03695 () | 736027..736365 | - | 339 | WP_000024053.1 | phage tail protein | - |
| HV284_RS03700 () | 736358..739591 | - | 3234 | WP_181474746.1 | phage tail tape measure protein | - |
| HV284_RS03705 () | 739755..739955 | - | 201 | WP_032139919.1 | hypothetical protein | - |
| HV284_RS03710 () | 740063..740422 | - | 360 | WP_122984268.1 | hypothetical protein | - |
| HV284_RS03715 () | 740573..741535 | - | 963 | WP_001516456.1 | hypothetical protein | - |
| HV284_RS03720 () | 741562..741954 | - | 393 | WP_153274765.1 | electron transfer flavoprotein subunit beta | - |
| HV284_RS03725 () | 741951..742331 | - | 381 | WP_001029819.1 | hypothetical protein | - |
| HV284_RS03730 () | 742332..742715 | - | 384 | WP_000524260.1 | hypothetical protein | - |
| HV284_RS03735 () | 742715..743110 | - | 396 | WP_000634210.1 | hypothetical protein | - |
| HV284_RS03740 () | 743114..743290 | - | 177 | WP_000908084.1 | hypothetical protein | - |
| HV284_RS03745 () | 743333..744472 | - | 1140 | WP_181474747.1 | P22 coat - protein 5 family protein | - |
| HV284_RS03750 () | 744571..745335 | - | 765 | WP_181474748.1 | hypothetical protein | - |
| HV284_RS03755 () | 745440..746552 | - | 1113 | WP_096215917.1 | hypothetical protein | - |
| HV284_RS03760 () | 746536..747942 | - | 1407 | WP_181474749.1 | DUF4055 domain-containing protein | - |
| HV284_RS03765 () | 747945..749246 | - | 1302 | WP_000625349.1 | terminase family protein | - |
| HV284_RS03770 () | 749227..750324 | - | 1098 | WP_181474750.1 | terminase small subunit | - |
| HV284_RS03775 () | 750328..750579 | - | 252 | WP_000613571.1 | hypothetical protein | - |
| HV284_RS03780 () | 750515..751447 | - | 933 | WP_020245001.1 | hypothetical protein | - |
| HV284_RS03785 () | 751440..752231 | - | 792 | WP_001516459.1 | ParB/Srx family N-terminal domain-containing protein | - |
| HV284_RS03790 () | 752369..753826 | - | 1458 | WP_001097899.1 | Trk system potassium transporter TrkG | - |
| HV284_RS03795 () | 754023..754208 | - | 186 | WP_181474751.1 | Rz1 family lipoprotein | - |
| HV284_RS03800 () | 754425..754829 | - | 405 | WP_181474752.1 | lysozyme | - |
| HV284_RS03805 () | 754935..755207 | + | 273 | WP_001315200.1 | hypothetical protein | - |
| HV284_RS03810 () | 755173..755517 | - | 345 | WP_000193257.1 | YdfR family protein | - |
| HV284_RS03815 () | 755522..755737 | - | 216 | WP_000839600.1 | phage lysis protein EssD | - |
| HV284_RS03830 () | 757024..757566 | - | 543 | WP_181474753.1 | DUF1133 family protein | - |
| HV284_RS03835 () | 757563..757853 | - | 291 | WP_181474754.1 | DUF1364 domain-containing protein | - |
| HV284_RS03840 () | 757853..758452 | - | 600 | WP_000940322.1 | DUF1367 family protein | - |
| HV284_RS03845 () | 758919..759131 | - | 213 | WP_000543831.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 759086..759116 | + | 31 | - | - | Antitoxin Detail |
| HV284_RS03850 () | 760036..760425 | - | 390 | WP_181474755.1 | hypothetical protein | - |
| HV284_RS03855 () | 760715..760957 | - | 243 | Protein_761 | ead/Ea22-like family protein | - |
| HV284_RS03860 () | 760954..761370 | - | 417 | WP_181474756.1 | DUF977 family protein | - |
| HV284_RS03865 () | 761386..762147 | - | 762 | WP_000450696.1 | DUF1627 domain-containing protein | - |
| HV284_RS03870 () | 762170..762916 | - | 747 | WP_101917241.1 | ATP-binding protein | - |
| HV284_RS03875 () | 762923..763779 | - | 857 | Protein_765 | DUF1376 domain-containing protein | - |
| HV284_RS03880 () | 763792..764214 | - | 423 | WP_000693797.1 | phage protein | - |
| HV284_RS03885 () | 764237..764533 | - | 297 | WP_016233016.1 | toxin YdaS | - |
| HV284_RS03890 () | 764657..765133 | + | 477 | WP_001531660.1 | DNA-binding transcriptional repressor RacR | - |
| HV284_RS03895 () | 765586..765741 | + | 156 | WP_001169151.1 | YdaF family protein | - |
| HV284_RS03900 () | 765738..766226 | - | 489 | WP_016233015.1 | superinfection exclusion B family protein | - |
| HV284_RS03905 () | 766667..766888 | + | 222 | WP_000560218.1 | killing protein KilR | - |
| HV284_RS03910 () | 766882..767058 | + | 177 | WP_000245534.1 | hypothetical protein | - |
| HV284_RS03915 () | 767132..767407 | + | 276 | WP_181474757.1 | hypothetical protein | - |
| HV284_RS03920 () | 767506..769539 | + | 2034 | WP_181474758.1 | hypothetical protein | - |
| HV284_RS03925 () | 769517..769813 | + | 297 | WP_000102059.1 | host-nuclease inhibitor protein Gam | - |
| HV284_RS03930 () | 769819..770598 | + | 780 | WP_181474759.1 | phage recombination protein Bet | - |
| HV284_RS03935 () | 770595..771275 | + | 681 | WP_000186892.1 | YqaJ viral recombinase family protein | - |
| HV284_RS03940 () | 771308..771502 | + | 195 | WP_001307771.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| HV284_RS03945 () | 771495..771683 | + | 189 | WP_089674655.1 | DUF1187 family protein | - |
| - () | 771501..771679 | - | 179 | NuclAT_0 | - | - |
| - () | 771501..771679 | - | 179 | NuclAT_0 | - | - |
| - () | 771501..771679 | - | 179 | NuclAT_0 | - | - |
| - () | 771501..771679 | - | 179 | NuclAT_0 | - | - |
| HV284_RS03950 () | 771783..771998 | + | 216 | WP_000079604.1 | excisionase XisR | - |
| HV284_RS03955 () | 772000..773235 | + | 1236 | WP_000040852.1 | Low-affinity inorganic phosphate transporter 1 ; Integrase | Integrase |
| HV284_RS03960 () | 773287..774222 | + | 936 | WP_016242657.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| HV284_RS03965 () | 774317..775690 | - | 1374 | WP_181474760.1 | ATP-dependent RNA helicase DbpA | - |
| HV284_RS03970 () | 775720..775893 | - | 174 | WP_001296046.1 | hypothetical protein | - |
| HV284_RS03975 () | 776168..777151 | - | 984 | WP_000452014.1 | zinc transporter ZntB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|