MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 161320 bp
Accession: NZ_CP056159 Location: 2504142..2665461 Organism: Escherichia marmotae strain RHBSTW-00814 Replicon: chromosome
Accession: NZ_CP056159 Location: 2504142..2665461 Organism: Escherichia marmotae strain RHBSTW-00814 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV284_RS12280 () | 2499943..2501244 | + | 1302 | WP_000961962.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| HV284_RS12285 () | 2501360..2501698 | + | 339 | WP_001517610.1 | divalent cation tolerance protein CutA | - |
| HV284_RS12290 () | 2501674..2503371 | + | 1698 | WP_181474081.1 | protein-disulfide reductase DsbD | - |
| HV284_RS12295 () | 2503407..2503982 | + | 576 | WP_001188522.1 | transcriptional regulator | - |
| HV284_RS12305 () | 2504356..2505348 | - | 993 | WP_181474082.1 | hypothetical protein ; Integrase | Integrase |
| HV284_RS12310 () | 2505406..2506971 | - | 1566 | WP_181474083.1 | TraI domain-containing protein | - |
| HV284_RS12315 () | 2506964..2508478 | - | 1515 | WP_181474084.1 | UvrD-helicase domain-containing protein | - |
| HV284_RS12320 () | 2508569..2508769 | - | 201 | WP_033555756.1 | hypothetical protein | - |
| HV284_RS12325 () | 2508963..2509130 | - | 168 | WP_072016859.1 | YhfL family protein | - |
| HV284_RS12330 () | 2509351..2512605 | - | 3255 | WP_181474085.1 | hypothetical protein | VF |
| HV284_RS12335 () | 2512787..2513179 | + | 393 | WP_033555761.1 | hypothetical protein | - |
| HV284_RS12340 () | 2514085..2514324 | - | 240 | WP_033555764.1 | hypothetical protein | - |
| HV284_RS12345 () | 2514876..2515592 | - | 717 | WP_181474086.1 | hypothetical protein | - |
| HV284_RS12350 () | 2515785..2516423 | - | 639 | WP_033555767.1 | ParB N-terminal domain-containing protein | - |
| HV284_RS12355 () | 2516408..2517634 | - | 1227 | WP_181474087.1 | phosphoadenosine phosphosulfate reductase | - |
| HV284_RS12360 () | 2518038..2518592 | - | 555 | WP_181474088.1 | hypothetical protein | - |
| HV284_RS12365 () | 2518605..2519243 | - | 639 | WP_097468753.1 | DsbA family protein | - |
| HV284_RS12370 () | 2519282..2519497 | - | 216 | WP_033555773.1 | hypothetical protein | VF |
| HV284_RS12375 () | 2519596..2520561 | - | 966 | WP_181474089.1 | hypothetical protein | - |
| HV284_RS12380 () | 2520697..2521707 | - | 1011 | WP_033555776.1 | hypothetical protein | - |
| HV284_RS12385 () | 2521793..2522176 | - | 384 | WP_033555904.1 | hypothetical protein | - |
| HV284_RS12390 () | 2522385..2522924 | - | 540 | WP_181474090.1 | hypothetical protein | VF |
| HV284_RS12395 () | 2522921..2524261 | - | 1341 | WP_181474091.1 | FKBP-type peptidyl-prolyl cis-trans isomerase | - |
| HV284_RS12400 () | 2524283..2524816 | - | 534 | WP_157945708.1 | hypothetical protein | VF |
| HV284_RS12405 () | 2524835..2525383 | - | 549 | WP_181474092.1 | hypothetical protein | VF |
| HV284_RS12410 () | 2525401..2525988 | - | 588 | WP_137491257.1 | hypothetical protein | VF |
| HV284_RS12415 () | 2526024..2526755 | - | 732 | WP_021572443.1 | hypothetical protein | VF |
| HV284_RS12420 () | 2526884..2529391 | - | 2508 | WP_170898846.1 | hypothetical protein | VF |
| HV284_RS12425 () | 2529548..2530135 | - | 588 | WP_033555781.1 | hypothetical protein | VF |
| HV284_RS12430 () | 2530217..2530726 | - | 510 | WP_181475110.1 | hypothetical protein | VF |
| HV284_RS12435 () | 2530890..2531204 | - | 315 | WP_033555783.1 | hypothetical protein | VF |
| HV284_RS12440 () | 2532014..2532700 | - | 687 | WP_181474093.1 | N-6 DNA methylase | - |
| HV284_RS12445 () | 2532822..2533769 | - | 948 | WP_000005867.1 | DUF1281 domain-containing protein | - |
| HV284_RS12450 () | 2533898..2534371 | - | 474 | WP_157922163.1 | antirestriction protein | - |
| HV284_RS12455 () | 2534386..2534769 | - | 384 | WP_029403201.1 | hypothetical protein | - |
| HV284_RS12460 () | 2534892..2535521 | - | 630 | WP_181474094.1 | hypothetical protein | - |
| HV284_RS12465 () | 2535609..2535986 | - | 378 | WP_097292597.1 | hypothetical protein | - |
| HV284_RS12470 () | 2536090..2536569 | - | 480 | WP_137440720.1 | hypothetical protein | - |
| HV284_RS12475 () | 2536674..2537048 | - | 375 | WP_000102861.1 | hypothetical protein | - |
| HV284_RS12480 () | 2537158..2537508 | - | 351 | WP_181474095.1 | hypothetical protein | - |
| HV284_RS12485 () | 2537888..2538193 | - | 306 | WP_181475111.1 | hypothetical protein | - |
| HV284_RS12490 () | 2538244..2539146 | - | 903 | WP_000091035.1 | integrase domain-containing protein | - |
| HV284_RS12495 () | 2539480..2539764 | + | 285 | WP_181475156.1 | hypothetical protein | - |
| HV284_RS12500 () | 2540827..2541390 | - | 564 | WP_000949412.1 | hypothetical protein | - |
| HV284_RS12505 () | 2541517..2541906 | + | 390 | WP_089644290.1 | hypothetical protein | - |
| HV284_RS12510 () | 2541944..2543518 | - | 1575 | WP_001422117.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HV284_RS12515 () | 2543521..2543856 | - | 336 | WP_001030563.1 | hypothetical protein | - |
| HV284_RS12520 () | 2543849..2545300 | - | 1452 | WP_181474096.1 | integrating conjugative element protein | - |
| HV284_RS12525 () | 2545314..2546288 | - | 975 | WP_126510091.1 | TIGR03756 family integrating conjugative element protein | - |
| HV284_RS12530 () | 2546285..2546680 | - | 396 | WP_126510092.1 | TIGR03757 family integrating conjugative element protein | - |
| HV284_RS12535 () | 2547202..2547858 | + | 657 | WP_181474097.1 | DsbA family protein | - |
| HV284_RS12540 () | 2548066..2548269 | - | 204 | WP_137510859.1 | DUF1187 family protein | - |
| HV284_RS12545 () | 2548696..2549076 | - | 381 | WP_126510094.1 | acetyltransferase | - |
| HV284_RS12550 () | 2549081..2551909 | - | 2829 | WP_181474098.1 | conjugative transfer ATPase | - |
| HV284_RS12555 () | 2552029..2552439 | - | 411 | WP_069723000.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| HV284_RS12560 () | 2552451..2553941 | - | 1491 | WP_181474099.1 | TIGR03752 family integrating conjugative element protein | - |
| HV284_RS12565 () | 2553931..2554839 | - | 909 | WP_181475112.1 | TIGR03749 family integrating conjugative element protein | - |
| HV284_RS12570 () | 2554878..2555531 | - | 654 | WP_181474100.1 | TIGR03746 family integrating conjugative element protein | - |
| HV284_RS12575 () | 2555528..2555893 | - | 366 | WP_181474101.1 | TIGR03750 family conjugal transfer protein | - |
| HV284_RS12580 () | 2555906..2556304 | - | 399 | WP_181474102.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| HV284_RS12585 () | 2556348..2556590 | - | 243 | WP_000525826.1 | TIGR03758 family integrating conjugative element protein | - |
| HV284_RS12590 () | 2556590..2556934 | - | 345 | WP_047659572.1 | RAQPRD family integrative conjugative element protein | - |
| HV284_RS12595 () | 2557206..2557685 | - | 480 | WP_001422141.1 | SocA family protein | - |
| HV284_RS12600 () | 2557975..2558727 | - | 753 | WP_181474103.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| HV284_RS12605 () | 2558720..2560816 | - | 2097 | WP_135524137.1 | type IV conjugative transfer system coupling protein TraD | - |
| HV284_RS12610 () | 2560813..2561601 | - | 789 | WP_181474104.1 | hypothetical protein | - |
| HV284_RS12615 () | 2561598..2562110 | - | 513 | WP_181474105.1 | hypothetical protein | - |
| HV284_RS12620 () | 2562107..2562712 | - | 606 | WP_181474106.1 | restriction endonuclease | - |
| HV284_RS12625 () | 2562709..2563233 | - | 525 | WP_181474107.1 | integrating conjugative element protein | - |
| HV284_RS12630 () | 2563230..2563889 | - | 660 | WP_181474108.1 | hypothetical protein | VF |
| HV284_RS12635 () | 2563868..2564587 | - | 720 | WP_181474109.1 | TIGR03759 family integrating conjugative element protein | - |
| HV284_RS12640 () | 2564594..2565367 | - | 774 | WP_181474110.1 | Tat (twin-arginine translocation) pathway signal sequence | - |
| HV284_RS12645 () | 2565364..2565960 | - | 597 | WP_181475113.1 | hypothetical protein | VF |
| HV284_RS12650 () | 2566152..2567096 | - | 945 | WP_181474111.1 | hypothetical protein | VF |
| HV284_RS12655 () | 2567145..2567681 | - | 537 | WP_053509828.1 | single-stranded DNA-binding protein | - |
| HV284_RS12660 () | 2567697..2567900 | - | 204 | WP_047659586.1 | hypothetical protein | - |
| HV284_RS12665 () | 2567991..2568446 | - | 456 | WP_097468848.1 | DUF3577 domain-containing protein | - |
| HV284_RS12670 () | 2569037..2571046 | - | 2010 | WP_181474112.1 | DNA topoisomerase III | - |
| HV284_RS12675 () | 2571062..2571754 | - | 693 | WP_181474113.1 | TIGR03761 family integrating conjugative element protein | - |
| HV284_RS12680 () | 2572529..2573773 | - | 1245 | WP_181475114.1 | helix-turn-helix domain-containing protein | - |
| HV284_RS12685 () | 2573877..2574252 | - | 376 | Protein_2488 | ead/Ea22-like family protein | - |
| HV284_RS12690 () | 2574333..2574608 | - | 276 | WP_181474114.1 | hypothetical protein | - |
| HV284_RS12695 () | 2574878..2575456 | - | 579 | WP_001065818.1 | DUF2857 domain-containing protein | - |
| HV284_RS12700 () | 2575453..2576178 | - | 726 | WP_181475115.1 | DUF2786 domain-containing protein | - |
| HV284_RS12705 () | 2576171..2577895 | - | 1725 | WP_181474115.1 | ParB family protein | - |
| HV284_RS12710 () | 2577895..2579262 | - | 1368 | WP_181474116.1 | replicative DNA helicase | - |
| HV284_RS12715 () | 2579616..2580518 | - | 903 | WP_181474117.1 | hypothetical protein | - |
| HV284_RS12720 () | 2580503..2580718 | - | 216 | WP_137440781.1 | hypothetical protein | - |
| HV284_RS12725 () | 2580820..2581080 | - | 261 | WP_181474118.1 | hypothetical protein | - |
| HV284_RS12730 () | 2581074..2581952 | - | 879 | WP_001023817.1 | Iron-sulfur cluster carrier protein | VF |
| HV284_RS12735 () | 2582291..2583556 | + | 1266 | WP_181474119.1 | hypothetical protein ; Integrase | Integrase |
| HV284_RS12740 () | 2583875..2585374 | - | 1500 | WP_181474120.1 | phosphoethanolamine transferase | - |
| HV284_RS12745 () | 2585526..2586266 | - | 741 | WP_181475116.1 | hypothetical protein | VF |
| HV284_RS12750 () | 2586575..2587044 | + | 470 | Protein_2501 | H-NS histone family protein | - |
| HV284_RS12755 () | 2587596..2588603 | - | 1008 | WP_001559786.1 | LacI family DNA-binding transcriptional regulator | - |
| HV284_RS12760 () | 2588629..2590038 | - | 1410 | WP_181474121.1 | sucrose-6-phosphate hydrolase | - |
| HV284_RS12765 () | 2590038..2591408 | - | 1371 | WP_000344912.1 | sucrose-specific PTS transporter subunit IIBC | - |
| HV284_RS12770 () | 2591469..2592986 | - | 1518 | WP_000277212.1 | carbohydrate porin | - |
| HV284_RS12775 () | 2593150..2594070 | - | 921 | WP_001559789.1 | aminoimidazole riboside kinase | - |
| HV284_RS12780 () | 2594295..2594438 | + | 144 | WP_181474122.1 | hypothetical protein | - |
| HV284_RS12785 () | 2594739..2594885 | + | 147 | WP_181474123.1 | transposase domain-containing protein | - |
| HV284_RS12790 () | 2595003..2595665 | - | 663 | WP_000836532.1 | PAS domain-containing protein | - |
| HV284_RS12795 () | 2595849..2596808 | + | 960 | WP_021541270.1 | sugar phosphate isomerase/epimerase | - |
| HV284_RS12800 () | 2596830..2597207 | + | 378 | WP_001559792.1 | RidA family protein | - |
| HV284_RS12805 () | 2597223..2598455 | + | 1233 | WP_021541271.1 | MFS transporter | - |
| HV284_RS12810 () | 2598738..2599112 | + | 375 | Protein_2513 | transposase | - |
| HV284_RS12815 () | 2599167..2599528 | - | 362 | Protein_2514 | IS3 family transposase | - |
| HV284_RS12820 () | 2599581..2600247 | - | 667 | Protein_2515 | phosphoadenosine phosphosulfate reductase family protein | - |
| HV284_RS12825 () | 2600288..2601120 | - | 833 | Protein_2516 | ATP F0F1 synthase synthase | - |
| HV284_RS12830 () | 2601123..2601683 | - | 561 | WP_181474124.1 | hypothetical protein | - |
| HV284_RS12835 () | 2601903..2603264 | - | 1362 | WP_181474125.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| HV284_RS12840 () | 2603690..2605435 | - | 1746 | WP_181475117.1 | NERD domain-containing protein/DEAD/DEAH box helicase | - |
| HV284_RS12845 () | 2605671..2606915 | - | 1245 | WP_181474126.1 | GIY-YIG nuclease family protein | - |
| HV284_RS12850 () | 2607071..2607472 | - | 402 | WP_181474127.1 | hypothetical protein | - |
| HV284_RS12855 () | 2607625..2608056 | - | 432 | WP_181474128.1 | type VI secretion system baseplate subunit TssE | - |
| HV284_RS12860 () | 2608059..2608595 | - | 537 | WP_181474129.1 | hypothetical protein | VF |
| HV284_RS12865 () | 2608576..2609676 | - | 1101 | WP_181474130.1 | hypothetical protein | VF |
| HV284_RS12870 () | 2609631..2611394 | - | 1764 | WP_181474131.1 | hypothetical protein | VF |
| HV284_RS12875 () | 2611402..2612094 | - | 693 | WP_181474132.1 | type VI secretion protein | - |
| HV284_RS12880 () | 2612096..2613694 | - | 1599 | WP_181474133.1 | hypothetical protein | VF |
| HV284_RS12885 () | 2613694..2617083 | - | 3390 | WP_181474134.1 | hypothetical protein | VF |
| HV284_RS12890 () | 2617076..2618224 | - | 1149 | WP_181474135.1 | type VI secretion protein | - |
| HV284_RS12895 () | 2618228..2618494 | - | 267 | WP_181474136.1 | hypothetical protein | VF |
| HV284_RS12900 () | 2618526..2619206 | - | 681 | WP_181474137.1 | T6SS immunity phospholipase A1-binding lipoprotein Tli1-EAEC | - |
| HV284_RS12905 () | 2619226..2620908 | - | 1683 | WP_181474138.1 | hypothetical protein | VF |
| HV284_RS12910 () | 2620905..2623424 | - | 2520 | WP_181474139.1 | hypothetical protein | VF |
| HV284_RS12915 () | 2623503..2623730 | - | 228 | WP_181474140.1 | hypothetical protein | - |
| HV284_RS12920 () | 2623727..2624368 | - | 642 | WP_181474141.1 | hypothetical protein | - |
| HV284_RS12925 () | 2624355..2627042 | - | 2688 | WP_181474142.1 | hypothetical protein | VF |
| HV284_RS12930 () | 2627210..2627701 | - | 492 | WP_001007315.1 | hypothetical protein | VF |
| HV284_RS12935 () | 2627707..2629386 | - | 1680 | WP_181474143.1 | hypothetical protein | VF |
| HV284_RS12940 () | 2629386..2630075 | - | 690 | WP_181474144.1 | hypothetical protein | VF |
| HV284_RS12945 () | 2630072..2631421 | - | 1350 | WP_181474145.1 | hypothetical protein | VF |
| HV284_RS12950 () | 2631437..2632981 | - | 1545 | WP_181474146.1 | hypothetical protein | VF |
| HV284_RS12955 () | 2633003..2633500 | - | 498 | WP_000098939.1 | hypothetical protein | VF |
| HV284_RS12960 () | 2634007..2634198 | + | 192 | WP_001424022.1 | DUF4222 domain-containing protein | - |
| HV284_RS12965 () | 2634251..2634484 | - | 234 | WP_000124171.1 | hypothetical protein | - |
| HV284_RS12970 () | 2634833..2635318 | + | 486 | WP_181474147.1 | CaiF/GrlA family transcriptional regulator | - |
| HV284_RS12975 () | 2635625..2636143 | - | 519 | WP_032213276.1 | OmpH family outer membrane protein | - |
| HV284_RS12980 () | 2636203..2644110 | - | 7908 | WP_181474148.1 | hypothetical protein | VF |
| HV284_RS12985 () | 2644141..2644773 | - | 633 | WP_181475118.1 | helix-turn-helix transcriptional regulator | - |
| HV284_RS12990 () | 2645600..2645902 | + | 303 | Protein_2549 | transposase | - |
| HV284_RS12995 () | 2646024..2646257 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| HV284_RS13000 () | 2646327..2646899 | - | 573 | WP_001013351.1 | hypothetical protein | - |
| HV284_RS13005 () | 2646905..2647063 | + | 159 | WP_000903301.1 | hypothetical protein | - |
| HV284_RS13010 () | 2647183..2647749 | - | 567 | WP_181474149.1 | inovirus-type Gp2 protein | - |
| HV284_RS13015 () | 2648932..2650260 | - | 1329 | WP_181474150.1 | D-serine ammonia-lyase | - |
| HV284_RS13020 () | 2650278..2651615 | - | 1338 | WP_181474151.1 | D-serine transporter DsdX | - |
| HV284_RS13025 () | 2651833..2652777 | + | 945 | WP_181474152.1 | DNA-binding transcriptional regulator DsdC | - |
| HV284_RS13030 () | 2652846..2653156 | + | 311 | Protein_2557 | transposase | - |
| HV284_RS13035 () | 2653292..2654023 | - | 732 | WP_001543300.1 | inovirus Gp2 family protein | - |
| HV284_RS13040 () | 2656074..2656877 | + | 804 | WP_001271557.1 | hypothetical protein | - |
| HV284_RS13045 () | 2656934..2657893 | - | 960 | WP_181474153.1 | hypothetical protein | - |
| HV284_RS13050 () | 2658007..2658891 | + | 885 | WP_181474154.1 | 50S ribosome-binding GTPase | - |
| HV284_RS13055 () | 2659010..2659687 | + | 678 | WP_001601175.1 | hypothetical protein | - |
| HV284_RS13060 () | 2659693..2659926 | + | 234 | WP_181474155.1 | DUF905 family protein | - |
| HV284_RS13065 () | 2660026..2660844 | + | 819 | WP_181474156.1 | DUF945 domain-containing protein | - |
| HV284_RS13070 () | 2660935..2661420 | + | 486 | WP_053272402.1 | antirestriction protein | - |
| HV284_RS13075 () | 2661435..2661911 | + | 477 | WP_181474157.1 | RadC family protein | - |
| HV284_RS13080 () | 2661980..2662201 | + | 222 | WP_001601167.1 | DUF987 domain-containing protein | - |
| HV284_RS13085 () | 2662216..2662860 | + | 645 | WP_170898767.1 | antitoxin of toxin-antitoxin stability system | - |
| HV284_RS13090 () | 2662876..2663244 | + | 369 | WP_059268623.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HV284_RS13095 () | 2663334..2663711 | + | 378 | WP_170898765.1 | TA system toxin CbtA family protein | Toxin Detail |
| HV284_RS13100 () | 2663708..2664196 | + | 489 | WP_170898763.1 | hypothetical protein | - |
| HV284_RS13105 () | 2664208..2664375 | + | 168 | WP_181474158.1 | hypothetical protein | - |
| HV284_RS13110 () | 2664360..2665280 | + | 921 | Protein_2573 | hypothetical protein | VF |
| HV284_RS13115 () | 2666069..2667607 | + | 1539 | WP_061090610.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HV284_RS13120 () | 2667971..2669305 | + | 1335 | WP_000092898.1 | cadaverine/lysine antiporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|