MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 142158 bp
Accession: NZ_CP056149 Location: 1..142158 Organism: Enterobacter roggenkampii strain RHBSTW-00872 Replicon: plasmid pRHBSTW-00872_2
Accession: NZ_CP056149 Location: 1..142158 Organism: Enterobacter roggenkampii strain RHBSTW-00872 Replicon: plasmid pRHBSTW-00872_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV308_RS23475 () | 1..1014 | + | 1014 | WP_059359379.1 | replication initiation protein | - |
| HV308_RS23480 () | 1893..2210 | + | 318 | WP_181496110.1 | hypothetical protein | - |
| HV308_RS23485 () | 2487..3491 | - | 1005 | WP_000427614.1 | IS110 family transposase IS5075 | Transposase |
| HV308_RS23490 () | 3702..4610 | - | 909 | WP_059359247.1 | AraC family transcriptional regulator | - |
| HV308_RS23495 () | 4798..5892 | + | 1095 | WP_084833515.1 | NADH:flavin oxidoreductase/NADH oxidase | - |
| HV308_RS23500 () | 6173..7156 | + | 984 | WP_059359245.1 | aldo/keto reductase | - |
| HV308_RS23505 () | 7198..7926 | + | 729 | WP_059359244.1 | SDR family oxidoreductase | - |
| HV308_RS23510 () | 8000..8584 | - | 585 | WP_059359242.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HV308_RS23515 () | 8745..11729 | + | 2985 | WP_059359240.1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| HV308_RS23520 () | 11808..12638 | + | 831 | Protein_9 | IS110 family transposase IS5075 | Transposase |
| HV308_RS23525 () | 12681..14219 | - | 1539 | WP_048213845.1 | IS66 family transposase ISKpn24 | Transposase |
| HV308_RS23530 () | 14268..14615 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| HV308_RS23535 () | 14612..15016 | - | 405 | WP_003031976.1 | IS66 family transposase ISKpn24 | Transposase |
| HV308_RS23540 () | 15098..15274 | + | 177 | Protein_13 | IS110 family transposase | - |
| HV308_RS23545 () | 15560..15817 | + | 258 | WP_072213835.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HV308_RS23550 () | 16036..16470 | - | 435 | WP_181548467.1 | copper resistance system metallochaperone PcoE | - |
| HV308_RS23555 () | 16686..18086 | - | 1401 | WP_058800024.1 | copper resistance membrane spanning protein PcoS | - |
| HV308_RS23560 () | 18083..18763 | - | 681 | WP_001188930.1 | Transcriptional activator protein CopR | VF |
| HV308_RS23565 () | 18818..19747 | - | 930 | WP_000998778.1 | copper resistance inner membrane protein PcoD | - |
| HV308_RS23570 () | 19752..20132 | - | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| HV308_RS23575 () | 20172..21062 | - | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| HV308_RS23580 () | 21068..22885 | - | 1818 | WP_058800023.1 | multicopper oxidase PcoA | - |
| HV308_RS23585 () | 23120..23569 | + | 450 | WP_001023257.1 | copper resistance protein | - |
| HV308_RS23590 () | 23858..24595 | + | 738 | WP_004388332.1 | Murein DD-endopeptidase MepM | VF |
| HV308_RS23595 () | 24629..24826 | - | 198 | WP_181548468.1 | DUF2933 domain-containing protein | - |
| HV308_RS23600 () | 24867..27314 | - | 2448 | WP_023327683.1 | Ag(+)-translocating P-type ATPase SilP | - |
| HV308_RS23605 () | 27441..27881 | - | 441 | WP_008322815.1 | hypothetical protein | - |
| HV308_RS23610 () | 27968..31114 | - | 3147 | WP_000574021.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| HV308_RS23615 () | 31125..32417 | - | 1293 | WP_001485328.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| HV308_RS23620 () | 32531..32884 | - | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| HV308_RS23625 () | 32913..34298 | - | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| HV308_RS23630 () | 34488..35168 | + | 681 | WP_001572351.1 | Transcriptional regulatory protein CusR | VF |
| HV308_RS23635 () | 35161..36636 | + | 1476 | WP_032638115.1 | copper/silver sensor histidine kinase SilS | - |
| HV308_RS23640 () | 36887..37318 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| HV308_RS23645 () | 37462..37812 | + | 351 | WP_181548469.1 | DUF305 domain-containing protein | - |
| HV308_RS23650 () | 38200..39108 | - | 909 | WP_001372261.1 | HNH endonuclease | - |
| HV308_RS23655 () | 39745..40719 | + | 975 | WP_023327686.1 | sensor domain-containing diguanylate cyclase | - |
| HV308_RS23660 () | 41351..43561 | - | 2211 | WP_155020717.1 | AAA family ATPase | - |
| HV308_RS23665 () | 44167..44457 | + | 291 | WP_013087126.1 | hypothetical protein | - |
| HV308_RS23670 () | 44588..45118 | + | 531 | WP_013087127.1 | hypothetical protein | - |
| HV308_RS23675 () | 45137..45913 | + | 777 | WP_023327688.1 | site-specific integrase | - |
| HV308_RS23680 () | 46115..46372 | + | 258 | Protein_41 | site-specific integrase | - |
| HV308_RS23685 () | 46616..47626 | - | 1011 | WP_058800021.1 | RepB family plasmid replication initiator protein | - |
| HV308_RS23690 () | 48367..49533 | + | 1167 | WP_023327689.1 | plasmid-partitioning protein SopA | - |
| HV308_RS23695 () | 49533..50498 | + | 966 | WP_023327690.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HV308_RS23700 () | 51148..52419 | - | 1272 | WP_013087135.1 | Y-family DNA polymerase | - |
| HV308_RS23705 () | 52419..52850 | - | 432 | WP_013087136.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HV308_RS23710 () | 53257..54402 | + | 1146 | Protein_47 | type IV secretion system DNA-binding domain-containing protein | - |
| HV308_RS23715 () | 54399..59822 | + | 5424 | WP_181548470.1 | Multifunctional conjugation protein TraI | Relaxase |
| HV308_RS23720 () | 59851..60636 | + | 786 | WP_023327724.1 | DsbA family protein | - |
| HV308_RS23725 () | 60737..61285 | + | 549 | WP_032636183.1 | hypothetical protein | - |
| HV308_RS23730 () | 61276..61692 | + | 417 | WP_023327722.1 | type II toxin-antitoxin system YafO family toxin | - |
| HV308_RS23735 () | 61904..62893 | - | 990 | WP_023327721.1 | tyrosine-type recombinase/integrase | - |
| HV308_RS23740 () | 63049..63517 | + | 469 | Protein_53 | Multidrug efflux pump subunit AcrB | VF |
| HV308_RS23745 () | 63621..63821 | + | 201 | Protein_54 | GNAT family N-acetyltransferase | - |
| HV308_RS23750 () | 63882..64166 | + | 285 | WP_000537152.1 | IS3 family transposase ISEam1 | Transposase |
| HV308_RS23755 () | 64163..65017 | + | 855 | WP_077946840.1 | IS3 family transposase ISEc14 | Transposase |
| HV308_RS23760 () | 65027..67021 | + | 1995 | WP_155020741.1 | hypothetical protein | - |
| HV308_RS23765 () | 67030..67530 | + | 501 | WP_058800018.1 | hypothetical protein | - |
| HV308_RS23770 () | 67715..68710 | - | 996 | WP_058800017.1 | IS110 family transposase IS1663 | Transposase |
| HV308_RS23775 () | 68941..69330 | + | 390 | Protein_60 | IS5 family transposase ISThi1 | Transposase |
| HV308_RS23780 () | 69555..70457 | - | 903 | Protein_61 | Putative serine protease HhoB | VF |
| HV308_RS23785 () | 70596..73661 | + | 3066 | WP_032191944.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| HV308_RS23790 () | 73658..74680 | + | 1023 | WP_000156887.1 | IS110 family transposase IS1618 | Transposase |
| HV308_RS23795 () | 74945..75877 | + | 933 | WP_095526190.1 | IS5 family transposase IS903B | Transposase |
| HV308_RS23800 () | 76040..76426 | + | 387 | WP_032192118.1 | GtrA family protein | - |
| HV308_RS23805 () | 76423..77088 | + | 666 | Protein_66 | putative glycosyltransferase YkoT | VF |
| HV308_RS23810 () | 77116..77970 | + | 855 | Protein_67 | putative glycosyltransferase YkoT | VF |
| HV308_RS23815 () | 78470..79438 | - | 969 | WP_181548463.1 | IS5 family transposase IS903 | Transposase |
| HV308_RS23820 () | 79594..80403 | - | 810 | WP_000183578.1 | polysaccharide pyruvyl transferase family protein | - |
| HV308_RS23825 () | 80501..82723 | + | 2223 | WP_023312630.1 | glycosyltransferase | - |
| HV308_RS23830 () | 83427..84446 | - | 1020 | WP_181548471.1 | acyltransferase | - |
| HV308_RS23835 () | 84783..86086 | - | 1304 | Protein_72 | putative glycosyltransferase EpsJ | VF |
| HV308_RS23840 () | 86208..87353 | - | 1146 | WP_023157139.1 | N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase | VF |
| HV308_RS23845 () | 87354..88244 | - | 891 | WP_032191996.1 | hypothetical protein | VF |
| HV308_RS23850 () | 88241..89395 | - | 1155 | WP_016247610.1 | UDP-galactopyranose mutase | VF |
| HV308_RS23855 () | 89414..91306 | - | 1893 | WP_023312621.1 | General stress protein A | VF |
| HV308_RS23860 () | 91321..92061 | - | 741 | WP_000433876.1 | Teichoic acids export ATP-binding protein TagH | VF |
| HV308_RS23865 () | 92061..92828 | - | 768 | WP_015583927.1 | Teichoic acid translocation permease protein TagG | VF |
| HV308_RS23870 () | 93388..94404 | - | 1017 | WP_181548464.1 | IS5 family transposase IS5D | Transposase |
| HV308_RS23875 () | 94500..94592 | + | 93 | Protein_80 | DNA partition complex ParG | - |
| HV308_RS23880 () | 94730..95014 | - | 285 | WP_000277490.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HV308_RS23885 () | 95007..95249 | - | 243 | WP_000124732.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| HV308_RS23890 () | 95822..96451 | - | 630 | Protein_83 | replication initiator protein RepA | - |
| HV308_RS23895 () | 96485..97090 | - | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| HV308_RS23900 () | 97185..98429 | + | 1245 | Protein_85 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| HV308_RS23905 () | 98481..99185 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HV308_RS23910 () | 99249..99731 | + | 483 | Protein_87 | Tn3 family transposase ISEc63 | Transposase |
| HV308_RS23915 () | 100315..100710 | + | 396 | Protein_88 | TnsA endonuclease N-terminal domain-containing protein | - |
| HV308_RS23920 () | 101086..101535 | + | 450 | WP_050582953.1 | restriction endonuclease | - |
| HV308_RS23925 () | 101557..102525 | + | 969 | WP_181548419.1 | IS5 family transposase IS903B | Transposase |
| HV308_RS23930 () | 102844..103869 | - | 1026 | WP_023312623.1 | IS110 family transposase ISAve1 | Transposase |
| HV308_RS23935 () | 104248..104856 | + | 609 | WP_023311710.1 | hypothetical protein | VF |
| HV308_RS23940 () | 104952..105653 | + | 702 | WP_000820818.1 | putative fimbrial chaperone YadV | VF |
| HV308_RS23945 () | 105665..108151 | + | 2487 | WP_181548420.1 | Outer membrane usher protein HtrE | VF |
| HV308_RS23950 () | 108142..109137 | + | 996 | WP_023311709.1 | Fimbria adhesin protein | VF |
| HV308_RS23955 () | 109151..109786 | + | 636 | WP_000677445.1 | hypothetical protein | VF |
| HV308_RS23960 () | 109895..111433 | - | 1539 | WP_048213845.1 | IS66 family transposase ISKpn24 | Transposase |
| HV308_RS23965 () | 111482..111829 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| HV308_RS23970 () | 111826..112230 | - | 405 | WP_003031976.1 | IS66 family transposase ISKpn24 | Transposase |
| HV308_RS23975 () | 112311..112448 | - | 138 | Protein_100 | IS5/IS1182 family transposase | - |
| HV308_RS23980 () | 112656..113933 | - | 1278 | WP_053504456.1 | DUF2254 domain-containing protein | - |
| HV308_RS23985 () | 113997..115994 | - | 1998 | WP_008502232.1 | choline BCCT transporter BetT | - |
| HV308_RS23990 () | 116423..117120 | + | 698 | Protein_103 | IS1 family transposase IS1G | Transposase |
| HV308_RS23995 () | 117135..117716 | - | 582 | Protein_104 | IS110 family transposase IS1663 | Transposase |
| HV308_RS24000 () | 117947..118336 | + | 390 | Protein_105 | IS5 family transposase ISThi1 | Transposase |
| HV308_RS24005 () | 118561..119712 | - | 1152 | WP_000323730.1 | Putative serine protease HhoB | VF |
| HV308_RS24010 () | 119737..120702 | - | 966 | WP_023304017.1 | M48 family metalloprotease | - |
| HV308_RS24015 () | 120680..121177 | - | 498 | WP_040119787.1 | heat resistance protein PsiE-GI | - |
| HV308_RS24020 () | 121174..122889 | - | 1716 | WP_023304018.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| HV308_RS24025 () | 122893..123333 | - | 441 | WP_000786816.1 | heat resistance system thioredoxin Trx-GI | - |
| HV308_RS24030 () | 123323..124396 | - | 1074 | WP_181548465.1 | hypothetical protein | - |
| HV308_RS24035 () | 124556..125167 | - | 612 | WP_053504375.1 | heat resistance membrane protein HdeD-GI | - |
| HV308_RS24040 () | 125257..126144 | - | 888 | WP_019077722.1 | heat resistance protein YfdX2 | - |
| HV308_RS24045 () | 126247..127161 | - | 915 | WP_181548466.1 | heat resistance protein YfdX1 | - |
| HV308_RS24050 () | 127184..127642 | - | 459 | WP_001275373.1 | Spore protein SP21 | VF |
| HV308_RS24055 () | 127730..127870 | - | 141 | WP_023205099.1 | ATP-dependent metalloprotease FtsH | - |
| HV308_RS24060 () | 127821..128557 | - | 737 | Protein_117 | ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein | - |
| HV308_RS24065 () | 128618..128809 | - | 192 | WP_017146640.1 | hypothetical protein | - |
| HV308_RS24070 () | 128809..131658 | - | 2850 | WP_023304020.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| HV308_RS24075 () | 131764..132333 | - | 570 | WP_004118809.1 | Spore protein SP21 | VF |
| HV308_RS24080 () | 132368..132649 | - | 282 | WP_013307885.1 | helix-turn-helix domain-containing protein | - |
| HV308_RS24085 () | 132872..133135 | - | 264 | WP_032667972.1 | IS66 family transposase ISPpu19 | Transposase |
| HV308_RS24090 () | 133295..134263 | + | 969 | WP_023304022.1 | IS5 family transposase IS903B | Transposase |
| HV308_RS24095 () | 134483..136075 | - | 1593 | WP_023307215.1 | IS66 family transposase ISKox1 | Transposase |
| HV308_RS24100 () | 136106..136456 | - | 351 | WP_004189161.1 | IS66 family transposase ISKox1 | Transposase |
| HV308_RS24105 () | 136453..136893 | - | 441 | WP_023307217.1 | IS66 family transposase ISKox1 | Transposase |
| HV308_RS24110 () | 137049..137459 | + | 411 | WP_053504377.1 | hypothetical protein | - |
| HV308_RS24115 () | 137747..138319 | + | 573 | WP_032676095.1 | Tn3 family transposase ISEc63 | Transposase |
| HV308_RS24120 () | 138328..139146 | + | 819 | WP_023307220.1 | abortive infection family protein | - |
| HV308_RS24125 () | 139217..140560 | - | 1344 | WP_080339306.1 | ISNCY family transposase ISLad2 | Transposase |
| HV308_RS24130 () | 140767..141252 | - | 486 | WP_013087269.1 | GNAT family N-acetyltransferase | - |
| HV308_RS24135 () | 141240..141506 | - | 267 | WP_007869691.1 | DUF1778 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|