MGE detailed information
MGE type: Conjugative plasmid MGE length: 165251 bp
Accession: NZ_CP056146 Location: 1..165251 Organism: Klebsiella variicola strain RHBSTW-00883 Replicon: plasmid pRHBSTW-00883_2
Accession: NZ_CP056146 Location: 1..165251 Organism: Klebsiella variicola strain RHBSTW-00883 Replicon: plasmid pRHBSTW-00883_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV312_RS26470 () | 1..1011 | + | 1011 | WP_087846497.1 | RepB family plasmid replication initiator protein | - |
| HV312_RS26475 () | 1836..2576 | - | 741 | WP_032740674.1 | tyrosine-type recombinase/integrase | - |
| HV312_RS26480 () | 3295..3530 | - | 236 | Protein_2 | transposase | - |
| HV312_RS26485 () | 3720..4418 | - | 699 | WP_181482113.1 | hypothetical protein | - |
| HV312_RS26495 () | 6103..7734 | + | 1632 | WP_087846553.1 | carbohydrate porin | - |
| HV312_RS26500 () | 7813..8841 | - | 1029 | WP_181482115.1 | AraC family transcriptional regulator | - |
| HV312_RS26505 () | 9012..10418 | + | 1407 | WP_181482116.1 | PTS transporter subunit EIIC | - |
| HV312_RS26510 () | 10418..11881 | + | 1464 | WP_181482117.1 | family 1 glycosylhydrolase | - |
| HV312_RS26515 () | 11895..12116 | - | 222 | Protein_9 | IS66 family transposase ISCfr14 | Transposase |
| HV312_RS26520 () | 12587..12703 | + | 117 | WP_130573956.1 | hypothetical protein | - |
| HV312_RS26525 () | 12773..12985 | - | 213 | Protein_11 | hypothetical protein | - |
| HV312_RS26530 () | 13340..14460 | + | 1121 | WP_181482118.1 | IS3 family transposase | - |
| HV312_RS26535 () | 14543..14671 | - | 129 | Protein_13 | IS1 family transposase | - |
| HV312_RS26540 () | 15041..15913 | - | 873 | WP_087846503.1 | ROK family protein | - |
| HV312_RS26545 () | 15932..17398 | - | 1467 | WP_135717201.1 | family 1 glycosylhydrolase | - |
| HV312_RS26550 () | 17582..18505 | - | 924 | WP_087846507.1 | AraC family transcriptional regulator | - |
| HV312_RS26555 () | 18829..19992 | + | 1164 | WP_181482119.1 | MFS transporter | - |
| HV312_RS26560 () | 20129..21229 | + | 1101 | WP_181482139.1 | porin | - |
| HV312_RS26565 () | 22275..22276 | - | 2 | WP_181482120.1 | IS3 family transposase ISYpe1 | Transposase |
| HV312_RS26570 () | 22865..23704 | - | 840 | WP_087846514.1 | fumarylacetoacetate hydrolase family protein | - |
| HV312_RS26575 () | 23909..25192 | - | 1284 | WP_087846602.1 | MFS transporter | - |
| HV312_RS26580 () | 25207..26328 | - | 1122 | WP_135717237.1 | amidohydrolase | - |
| HV312_RS26585 () | 26422..27639 | - | 1218 | WP_181482121.1 | MFS transporter | - |
| HV312_RS26590 () | 28396..29364 | - | 969 | WP_181481626.1 | IS5 family transposase IS903B | Transposase |
| HV312_RS26595 () | 29392..29867 | + | 476 | Protein_25 | IS3 family transposase ISSen4 | Transposase |
| HV312_RS26600 () | 30077..30415 | + | 339 | WP_135717249.1 | integrase core domain-containing protein | - |
| HV312_RS26605 () | 30666..31441 | - | 776 | Protein_27 | Secretory immunoglobulin A-binding protein EsiB | VF |
| HV312_RS26610 () | 31663..32679 | + | 1017 | WP_181482122.1 | IS630 family transposase ISEc33 | Transposase |
| HV312_RS26615 () | 32724..33182 | + | 459 | WP_181482123.1 | FCD domain-containing protein | - |
| HV312_RS26620 () | 33482..34777 | - | 1296 | WP_135717207.1 | anaerobic C4-dicarboxylate transporter | - |
| HV312_RS26625 () | 34815..35696 | - | 882 | WP_135717208.1 | fumarylacetoacetate hydrolase family protein | - |
| HV312_RS26630 () | 35773..37167 | - | 1395 | WP_135717209.1 | MFS transporter | - |
| HV312_RS26635 () | 37398..38324 | - | 927 | WP_135717213.1 | dihydrodipicolinate synthase family protein | - |
| HV312_RS26640 () | 38596..39627 | - | 1032 | WP_181482124.1 | LacI family transcriptional regulator | - |
| HV312_RS26645 () | 40112..41509 | + | 1398 | WP_135717211.1 | MFS transporter | - |
| HV312_RS26650 () | 41647..42990 | + | 1344 | WP_181482125.1 | carbohydrate porin | - |
| HV312_RS26655 () | 43580..43783 | - | 204 | Protein_37 | MFS transporter | - |
| HV312_RS26660 () | 43966..44460 | - | 495 | WP_135717221.1 | flavin reductase | - |
| HV312_RS26665 () | 44472..45440 | - | 969 | WP_087846524.1 | PDR/VanB family oxidoreductase | - |
| HV312_RS26670 () | 45465..46205 | - | 741 | WP_181482126.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| HV312_RS26675 () | 46213..46692 | - | 480 | WP_087846528.1 | hypothetical protein | - |
| HV312_RS26680 () | 46689..47996 | - | 1308 | WP_087846530.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| HV312_RS26685 () | 48050..48577 | - | 528 | WP_087846532.1 | nuclear transport factor 2 family protein | - |
| HV312_RS26690 () | 48581..48925 | - | 345 | WP_087846534.1 | IacB protein | - |
| HV312_RS26695 () | 48945..50111 | - | 1167 | WP_135717217.1 | flavin-dependent monooxygenase | - |
| HV312_RS26700 () | 50176..51318 | - | 1143 | WP_087846538.1 | amidase | - |
| HV312_RS26705 () | 51674..52144 | - | 471 | WP_087846607.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| HV312_RS26710 () | 52692..53669 | + | 978 | Protein_48 | family 1 glycosylhydrolase | - |
| HV312_RS26715 () | 54007..54261 | - | 255 | WP_181482127.1 | helix-turn-helix domain-containing protein | - |
| HV312_RS26720 () | 54471..56153 | - | 1683 | WP_181482128.1 | hypothetical protein | - |
| HV312_RS26725 () | 56334..56585 | - | 252 | Protein_51 | ISNCY family transposase | - |
| HV312_RS26730 () | 56585..57090 | - | 506 | Protein_52 | IS3 family transposase ISRaq1 | Transposase |
| HV312_RS26735 () | 57520..57780 | + | 261 | WP_109233459.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HV312_RS26740 () | 57767..58063 | + | 297 | WP_109233458.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HV312_RS26745 () | 58412..59302 | - | 891 | Protein_55 | glucose-1-phosphate adenylyltransferase | - |
| HV312_RS26750 () | 59320..60570 | - | 1251 | Protein_56 | 1,4-alpha-glucan branching enzyme | - |
| HV312_RS26755 () | 61138..61338 | + | 201 | WP_181482129.1 | glycogen synthesis protein GlgS | - |
| HV312_RS26760 () | 62019..62927 | + | 909 | WP_040222839.1 | TIM barrel protein | - |
| HV312_RS26765 () | 63000..63938 | - | 939 | WP_181482130.1 | 2-hydroxyacid dehydrogenase | - |
| HV312_RS26770 () | 64000..65322 | - | 1323 | WP_181482131.1 | MFS transporter | - |
| HV312_RS26775 () | 65669..66523 | - | 855 | WP_181482132.1 | sugar phosphate isomerase/epimerase | - |
| HV312_RS26780 () | 66618..68609 | - | 1992 | WP_181482133.1 | transketolase | - |
| HV312_RS26785 () | 68596..69576 | - | 981 | WP_040222843.1 | transaldolase | - |
| HV312_RS26790 () | 69597..70076 | - | 480 | WP_040222844.1 | RpiB/LacA/LacB family sugar-phosphate isomerase | - |
| HV312_RS26795 () | 70410..72170 | + | 1761 | WP_181482134.1 | dihydroxyacetone kinase family protein | - |
| HV312_RS26800 () | 72161..72940 | + | 780 | WP_040222848.1 | triose-phosphate isomerase | - |
| HV312_RS26805 () | 73080..74042 | + | 963 | WP_032691070.1 | sugar-binding transcriptional regulator | - |
| HV312_RS26810 () | 74258..74659 | - | 402 | Protein_68 | cation:proton antiporter | - |
| HV312_RS26815 () | 75286..76188 | + | 903 | WP_181482135.1 | hypothetical protein | - |
| HV312_RS26820 () | 76343..76630 | + | 288 | WP_181482136.1 | Isochorismate pyruvate lyase | VF |
| HV312_RS26825 () | 76765..77733 | - | 969 | WP_181481626.1 | IS5 family transposase IS903B | Transposase |
| HV312_RS26830 () | 77751..78671 | - | 921 | WP_181482137.1 | HTH-type transcriptional regulator PgrR | VF |
| HV312_RS26835 () | 78796..79569 | + | 774 | WP_087846578.1 | SDR family oxidoreductase | - |
| HV312_RS26840 () | 79655..79921 | + | 267 | WP_181482138.1 | hypothetical protein | - |
| HV312_RS26845 () | 79965..81122 | + | 1158 | WP_181482140.1 | low temperature requirement protein A | - |
| HV312_RS26850 () | 81137..81697 | + | 561 | WP_181482141.1 | hypothetical protein | VF |
| HV312_RS26855 () | 81817..82518 | + | 702 | WP_087846582.1 | hypothetical protein | VF |
| HV312_RS26860 () | 83195..84190 | + | 996 | WP_181482099.1 | IS110 family transposase IS1663 | Transposase |
| HV312_RS26865 () | 84284..84832 | - | 549 | WP_074194641.1 | GNAT family N-acetyltransferase | - |
| HV312_RS26870 () | 86104..86961 | - | 858 | WP_181482100.1 | incFII family plasmid replication initiator RepA | - |
| HV312_RS26875 () | 86954..87031 | - | 78 | WP_099913970.1 | RepA leader peptide Tap | - |
| HV312_RS26880 () | 87248..87526 | - | 279 | WP_087749103.1 | replication regulatory protein RepA | - |
| HV312_RS26885 () | 87847..88347 | - | 501 | WP_165394220.1 | Phospholipase D | VF |
| HV312_RS26890 () | 88685..88946 | - | 262 | Protein_84 | bacteriocin immunity protein | - |
| HV312_RS26895 () | 88948..89504 | - | 557 | Protein_85 | S-type pyocin domain-containing protein | - |
| HV312_RS26900 () | 89498..89698 | + | 201 | Protein_86 | hypothetical protein | - |
| HV312_RS26905 () | 89913..90260 | - | 348 | WP_087749104.1 | hypothetical protein | - |
| HV312_RS26910 () | 90280..90876 | - | 597 | WP_087846388.1 | fertility inhibition protein FinO | - |
| HV312_RS26915 () | 90948..91673 | - | 726 | WP_087846390.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| HV312_RS26920 () | 91752..97013 | - | 5262 | WP_181482101.1 | Multifunctional conjugation protein TraI | Relaxase |
| HV312_RS26925 () | 97013..99319 | - | 2307 | Protein_91 | type IV conjugative transfer system coupling protein TraD | - |
| HV312_RS26930 () | 99681..100412 | - | 732 | WP_004152629.1 | complement resistance protein TraT | - |
| HV312_RS26935 () | 100602..101129 | - | 528 | WP_047665858.1 | conjugal transfer protein TraS | - |
| HV312_RS26940 () | 101135..103984 | - | 2850 | WP_181482102.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HV312_RS26945 () | 103984..105354 | - | 1371 | WP_087846395.1 | conjugal transfer protein TraH | - |
| HV312_RS26950 () | 105341..105604 | - | 264 | WP_087846397.1 | hypothetical protein | - |
| HV312_RS26955 () | 105601..106026 | - | 426 | WP_109910419.1 | HNH endonuclease | - |
| HV312_RS26960 () | 106030..106233 | - | 204 | WP_087846401.1 | hypothetical protein | - |
| HV312_RS26965 () | 106235..106636 | - | 402 | WP_087846403.1 | hypothetical protein | - |
| HV312_RS26970 () | 106629..107201 | - | 573 | WP_087846405.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HV312_RS26975 () | 107173..107412 | - | 240 | WP_009309875.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HV312_RS26980 () | 107423..108175 | - | 753 | WP_087846407.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HV312_RS26985 () | 108196..108522 | - | 327 | WP_086070807.1 | hypothetical protein | - |
| HV312_RS26990 () | 108750..108986 | - | 237 | WP_087846411.1 | conjugal transfer protein TrbE | - |
| HV312_RS26995 () | 109018..110973 | - | 1956 | WP_087846413.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HV312_RS27000 () | 111032..111670 | - | 639 | WP_032456788.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HV312_RS27005 () | 111683..112672 | - | 990 | WP_009309872.1 | conjugal transfer pilus assembly protein TraU | - |
| HV312_RS27010 () | 112669..113058 | - | 390 | WP_040107935.1 | hypothetical protein | - |
| HV312_RS27015 () | 113100..113726 | - | 627 | WP_087846415.1 | type-F conjugative transfer system protein TraW | - |
| HV312_RS27020 () | 113726..114115 | - | 390 | WP_040107933.1 | type-F conjugative transfer system protein TrbI | - |
| HV312_RS27025 () | 114115..116754 | - | 2640 | WP_040107932.1 | type IV secretion system protein TraC | - |
| HV312_RS27030 () | 116826..117218 | - | 393 | WP_087846417.1 | hypothetical protein | - |
| HV312_RS27035 () | 117232..117531 | - | 300 | WP_181482142.1 | hypothetical protein | - |
| HV312_RS27040 () | 117565..118533 | + | 969 | WP_181481626.1 | IS5 family transposase IS903B | Transposase |
| HV312_RS27045 () | 118589..118831 | - | 243 | Protein_115 | hypothetical protein | - |
| HV312_RS27050 () | 118851..119156 | - | 306 | WP_004178059.1 | type IV conjugative transfer system protein TraL | - |
| HV312_RS27055 () | 119170..119538 | - | 369 | WP_048295882.1 | type IV conjugative transfer system pilin TraA | - |
| HV312_RS27060 () | 119592..119963 | - | 372 | WP_004208838.1 | TraY domain-containing protein | - |
| HV312_RS27065 () | 120047..120742 | - | 696 | WP_075212577.1 | transcriptional regulator TraJ family protein | - |
| HV312_RS27070 () | 120949..121341 | - | 393 | WP_087846435.1 | relaxosome protein TraM | - |
| HV312_RS27075 () | 121776..122255 | + | 480 | WP_087846437.1 | hypothetical protein | VF |
| HV312_RS27080 () | 122293..122823 | - | 531 | WP_087846439.1 | antirestriction protein | - |
| HV312_RS27085 () | 123448..124281 | - | 834 | WP_087846441.1 | N-6 DNA methylase | - |
| HV312_RS27090 () | 124327..124557 | - | 231 | WP_086070792.1 | hypothetical protein | - |
| HV312_RS27095 () | 124645..124992 | - | 348 | WP_023292162.1 | hypothetical protein | - |
| HV312_RS27100 () | 125059..125439 | - | 381 | WP_038990973.1 | hypothetical protein | - |
| HV312_RS27105 () | 126238..126651 | - | 414 | WP_181482143.1 | helix-turn-helix domain-containing protein | - |
| HV312_RS27110 () | 126652..126930 | - | 279 | WP_047722602.1 | helix-turn-helix domain-containing protein | - |
| HV312_RS27115 () | 126920..127240 | - | 321 | WP_086070789.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HV312_RS27120 () | 127395..127607 | - | 213 | WP_086070788.1 | hypothetical protein | - |
| HV312_RS27125 () | 127668..127946 | - | 279 | WP_086070787.1 | hypothetical protein | - |
| HV312_RS27130 () | 128233..128718 | - | 486 | WP_049157791.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HV312_RS27135 () | 128706..128993 | - | 288 | WP_086070828.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HV312_RS27140 () | 129654..131153 | + | 1500 | WP_047666380.1 | SAVED domain-containing protein | - |
| HV312_RS27145 () | 131159..132304 | + | 1146 | WP_047666381.1 | hypothetical protein | - |
| HV312_RS27150 () | 132301..134103 | + | 1803 | WP_181482103.1 | ThiF family adenylyltransferase | - |
| HV312_RS27155 () | 134093..134587 | + | 495 | WP_181482104.1 | Mov34/MPN/PAD-1 family protein | - |
| HV312_RS27160 () | 135339..136700 | + | 1362 | WP_049157776.1 | hypothetical protein | - |
| HV312_RS27165 () | 137311..138039 | + | 729 | WP_181482105.1 | sigma-70 family RNA polymerase sigma factor | - |
| HV312_RS27170 () | 138150..138671 | + | 522 | WP_049157765.1 | putative RNA polymerase sigma factor FecI | VF |
| HV312_RS27175 () | 138668..139621 | + | 954 | WP_181482106.1 | fec operon regulator FecR | - |
| HV312_RS27180 () | 139708..142032 | + | 2325 | WP_087846456.1 | Fe(3+) dicitrate transport protein FecA | - |
| HV312_RS27185 () | 142091..142993 | + | 903 | WP_086070773.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| HV312_RS27190 () | 142990..143988 | + | 999 | WP_087846458.1 | Fe(3+) dicitrate transport system permease protein FecC | VF |
| HV312_RS27195 () | 143985..144941 | + | 957 | WP_087846460.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| HV312_RS27200 () | 144942..145709 | + | 768 | WP_087846462.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| HV312_RS27205 () | 146019..146648 | - | 630 | Protein_147 | IS5 family transposase IS903B | Transposase |
| HV312_RS27210 () | 146585..146848 | - | 264 | WP_087846464.1 | IS3 family transposase ISKpn8 | Transposase |
| HV312_RS27215 () | 147037..147363 | - | 327 | WP_181482107.1 | theronine dehydrogenase | - |
| HV312_RS27220 () | 147360..148088 | - | 729 | WP_087846468.1 | plasmid SOS inhibition protein A | - |
| HV312_RS27225 () | 148085..148516 | - | 432 | WP_181482108.1 | conjugation system SOS inhibitor PsiB | - |
| HV312_RS27230 () | 148561..150561 | - | 2001 | WP_181482109.1 | ParB/RepB/Spo0J family partition protein | - |
| HV312_RS27235 () | 150629..150862 | - | 234 | WP_087846474.1 | DUF905 domain-containing protein | - |
| HV312_RS27240 () | 150910..151452 | - | 543 | WP_181482110.1 | single-stranded DNA-binding protein | - |
| HV312_RS27245 () | 152132..152452 | - | 321 | WP_130573967.1 | hypothetical protein | - |
| HV312_RS27250 () | 152487..152741 | - | 255 | WP_165454128.1 | DNA polymerase III subunit theta | - |
| HV312_RS27255 () | 152942..153133 | - | 192 | WP_040107911.1 | hypothetical protein | - |
| HV312_RS27260 () | 153176..153682 | - | 507 | WP_046622857.1 | antirestriction protein ArdA | - |
| HV312_RS27265 () | 153727..154155 | - | 429 | WP_040107910.1 | antirestriction protein | - |
| HV312_RS27270 () | 154783..155433 | - | 651 | WP_181482144.1 | GGDEF domain-containing protein | - |
| HV312_RS27275 () | 155399..156355 | - | 957 | WP_181482111.1 | cache domain-containing protein | - |
| HV312_RS27280 () | 156766..157062 | + | 297 | WP_042937695.1 | hypothetical protein | - |
| HV312_RS27285 () | 158142..159044 | + | 903 | WP_040107984.1 | DHH family phosphoesterase | - |
| HV312_RS27290 () | 159047..159472 | + | 426 | WP_032740679.1 | universal stress protein | - |
| HV312_RS27295 () | 159489..160778 | + | 1290 | WP_032740678.1 | phosphopyruvate hydratase | - |
| HV312_RS27300 () | 160860..161249 | + | 390 | WP_040107907.1 | fluoride efflux transporter CrcB | - |
| HV312_RS27305 () | 162379..163344 | - | 966 | WP_181482112.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HV312_RS27310 () | 163344..164510 | - | 1167 | WP_000523815.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|