MGE detailed information
MGE type: Genomic_island MGE length: 24942 bp
Accession: NZ_CP056114 Location: 3259054..3283995 Organism: Escherichia coli strain Ec394-330266 Replicon: chromosome
Accession: NZ_CP056114 Location: 3259054..3283995 Organism: Escherichia coli strain Ec394-330266 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HWD38_RS15610 (3255902) | 3255902..3256621 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| HWD38_RS15615 (3256618) | 3256618..3258249 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| HWD38_RS15620 (3258430) | 3258430..3258660 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| HWD38_RS15625 (3258672) | 3258672..3258944 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| HWD38_RS15630 (3259054) | 3259054..3261591 | - | 2538 | WP_001296664.1 | hypothetical protein | VF |
| HWD38_RS15635 (3261624) | 3261624..3262220 | - | 597 | WP_230076143.1 | hypothetical protein | VF |
| HWD38_RS15640 (3262380) | 3262380..3262904 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| HWD38_RS15645 (3263308) | 3263308..3267120 | + | 3813 | WP_000705882.1 | hypothetical protein | VF |
| HWD38_RS15650 (3268015) | 3268015..3268845 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| HWD38_RS15655 (3270001) | 3270001..3273930 | + | 3930 | WP_001080129.1 | hypothetical protein | VF |
| HWD38_RS15660 (3274144) | 3274144..3274416 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| HWD38_RS15665 (3274644) | 3274644..3274940 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HWD38_RS15670 (3274968) | 3274968..3275141 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HWD38_RS15675 (3275260) | 3275260..3276777 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| HWD38_RS15680 (3277014) | 3277014..3278471 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| HWD38_RS15685 (3278530) | 3278530..3280677 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| HWD38_RS15690 (3280757) | 3280757..3282091 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HWD38_RS15695 (3282457) | 3282457..3283995 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HWD38_RS15700 (3284255) | 3284255..3284414 | - | 160 | Protein_3071 | integrase | - |
| HWD38_RS15710 (3284794) | 3284794..3285369 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| HWD38_RS15715 (3285406) | 3285406..3287103 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| HWD38_RS15720 (3287079) | 3287079..3287417 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| HWD38_RS15725 (3287533) | 3287533..3288834 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|