MGE detailed information
MGE type: Genomic_island MGE length: 13662 bp
Accession: NZ_CP056114 Location: 2692029..2705690 Organism: Escherichia coli strain Ec394-330266 Replicon: chromosome
Accession: NZ_CP056114 Location: 2692029..2705690 Organism: Escherichia coli strain Ec394-330266 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HWD38_RS12940 (2687180) | 2687180..2687386 | + | 207 | WP_000211312.1 | AlpA family transcriptional regulator | - |
| HWD38_RS12945 (2687481) | 2687481..2688083 | + | 603 | WP_000813435.1 | hypothetical protein | - |
| HWD38_RS12950 (2688920) | 2688920..2689345 | + | 426 | WP_000422741.1 | transposase | - |
| HWD38_RS12955 (2689342) | 2689342..2689692 | + | 351 | WP_000624722.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| HWD38_RS12960 (2689723) | 2689723..2691336 | + | 1614 | WP_000080195.1 | IS66-like element ISEc23 family transposase | - |
| HWD38_RS12965 (2691826) | 2691826..2691984 | + | 159 | WP_000250238.1 | hypothetical protein | - |
| HWD38_RS12970 (2692029) | 2692029..2692742 | + | 714 | WP_016236738.1 | hypothetical protein | - |
| HWD38_RS12975 (2692827) | 2692827..2693699 | + | 873 | WP_021553067.1 | GTPase family protein | - |
| HWD38_RS12980 (2694072) | 2694072..2696918 | + | 2847 | WP_023281714.1 | Ag43/Cah family autotransporter adhesin | - |
| HWD38_RS12985 (2696989) | 2696989..2697222 | + | 234 | WP_001117568.1 | DUF905 family protein | - |
| HWD38_RS12990 (2697313) | 2697313..2698131 | + | 819 | WP_001234753.1 | DUF932 domain-containing protein | - |
| HWD38_RS12995 (2698223) | 2698223..2698708 | + | 486 | WP_000214415.1 | antirestriction protein | - |
| HWD38_RS13000 (2698720) | 2698720..2698998 | + | 279 | Protein_2557 | hypothetical protein | - |
| HWD38_RS13005 (2699187) | 2699187..2700728 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| HWD38_RS13010 (2700743) | 2700743..2701489 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| HWD38_RS13015 (2701573) | 2701573..2701782 | + | 210 | Protein_2560 | hypothetical protein | - |
| HWD38_RS13020 (2701851) | 2701851..2702072 | + | 222 | WP_000692346.1 | DUF987 domain-containing protein | - |
| HWD38_RS13025 (2702146) | 2702146..2702514 | + | 369 | WP_024175935.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HWD38_RS13030 (2702604) | 2702604..2702981 | + | 378 | WP_001094448.1 | TA system toxin CbtA family protein | Toxin Detail |
| HWD38_RS13035 (2702978) | 2702978..2703466 | + | 489 | WP_000761714.1 | DUF5983 family protein | - |
| HWD38_RS13040 (2703478) | 2703478..2703670 | + | 193 | Protein_2565 | hypothetical protein | - |
| HWD38_RS13045 (2703755) | 2703755..2704600 | + | 846 | WP_000065751.1 | DUF4942 domain-containing protein | - |
| HWD38_RS13050 (2705193) | 2705193..2705690 | + | 498 | WP_000509815.1 | hypothetical protein | - |
| HWD38_RS13055 (2705868) | 2705868..2706791 | + | 924 | WP_000535950.1 | carboxylate/amino acid/amine transporter | - |
| HWD38_RS13060 (2706795) | 2706795..2707613 | - | 819 | WP_000779409.1 | lipoprotein NlpA | - |
| HWD38_RS13065 (2707835) | 2707835..2708128 | + | 294 | WP_001296563.1 | protein YicS | - |
| HWD38_RS13070 (2708169) | 2708169..2709359 | - | 1191 | WP_001288551.1 | purine ribonucleoside efflux pump NepI | - |
| HWD38_RS13075 (2709593) | 2709593..2709946 | + | 354 | WP_122984431.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HWD38_RS13080 (2709930) | 2709930..2710253 | + | 324 | WP_000125640.1 | DNA-binding transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|