MGE detailed information
MGE type: Genomic_island MGE length: 28761 bp
Accession: NZ_CP056077 Location: 1372211..1400971 Organism: Escherichia coli strain MS1170 Replicon: chromosome
Accession: NZ_CP056077 Location: 1372211..1400971 Organism: Escherichia coli strain MS1170 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HED12_RS07220 () | 1369487..1370212 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| HED12_RS07225 () | 1370249..1370788 | - | 540 | WP_000824119.1 | type 1 fimbrial protein | - |
| HED12_RS07230 () | 1370853..1371407 | - | 555 | WP_000695585.1 | type 1 fimbrial major subunit FimA | - |
| HED12_RS07235 () | 1371889..1372486 | - | 598 | Protein_1272 | type 1 fimbria switch DNA invertase FimE | - |
| HED12_RS07240 () | 1372964..1373566 | - | 603 | WP_000790574.1 | Tyrosine recombinase XerC | VF |
| HED12_RS07245 () | 1375030..1375746 | + | 717 | WP_001531273.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HED12_RS07250 () | 1375766..1376872 | + | 1107 | WP_001532880.1 | N-acetylneuraminate epimerase | - |
| HED12_RS07255 () | 1376937..1377917 | + | 981 | WP_001532876.1 | transposase | - |
| HED12_RS07260 () | 1377925..1378047 | - | 123 | Protein_1277 | HNH endonuclease | - |
| HED12_RS07265 () | 1378129..1379001 | + | 873 | WP_087602996.1 | HNH endonuclease | - |
| HED12_RS07270 () | 1379046..1379225 | + | 180 | WP_024187985.1 | hypothetical protein | - |
| HED12_RS07275 () | 1379624..1381659 | - | 2036 | Protein_1280 | hypothetical protein | - |
| HED12_RS07280 () | 1382480..1383277 | - | 798 | WP_001552326.1 | hypothetical protein | VF |
| HED12_RS07285 () | 1383391..1383666 | - | 276 | WP_001683517.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HED12_RS07290 () | 1383670..1383918 | - | 249 | WP_024187601.1 | ribbon-helix-helix domain-containing protein | - |
| HED12_RS07295 () | 1383995..1384828 | - | 834 | WP_096939091.1 | DUF4942 domain-containing protein | - |
| HED12_RS07300 () | 1384959..1385294 | - | 336 | WP_094259026.1 | TA system toxin CbtA family protein | Toxin Detail |
| HED12_RS07305 () | 1385325..1385660 | - | 336 | WP_096939090.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HED12_RS07310 () | 1385660..1386133 | - | 474 | WP_001552321.1 | DNA repair protein RadC | - |
| HED12_RS07315 () | 1386163..1386981 | - | 819 | WP_094259024.1 | DUF945 domain-containing protein | - |
| HED12_RS07320 () | 1387217..1388170 | - | 954 | WP_094259023.1 | hypothetical protein | - |
| HED12_RS07325 () | 1388763..1389377 | + | 615 | WP_094259022.1 | inovirus Gp2 family protein | - |
| HED12_RS07330 () | 1389495..1389713 | + | 219 | WP_094259021.1 | AlpA family phage regulatory protein | - |
| HED12_RS07335 () | 1389924..1390709 | - | 786 | WP_096939089.1 | hypothetical protein | - |
| HED12_RS07340 () | 1390721..1391734 | - | 1014 | WP_094259020.1 | 50S ribosome-binding GTPase | - |
| HED12_RS07345 () | 1391773..1392456 | - | 684 | WP_170984046.1 | WYL domain-containing protein | - |
| HED12_RS07350 () | 1393033..1396446 | + | 3414 | WP_094259019.1 | DEAD/DEAH box helicase family protein | - |
| HED12_RS07355 () | 1396510..1398144 | + | 1635 | WP_001683506.1 | type I restriction-modification system subunit M | - |
| HED12_RS07360 () | 1398141..1399304 | + | 1164 | WP_001683505.1 | restriction endonuclease subunit S | - |
| HED12_RS07365 () | 1399382..1400971 | - | 1590 | WP_001683504.1 | SIR2 family protein | - |
| HED12_RS07370 () | 1401365..1402633 | - | 1269 | WP_001683503.1 | integrase arm-type DNA-binding domain-containing protein | - |
| HED12_RS07380 () | 1403114..1404133 | + | 1020 | WP_001555771.1 | NADPH-dependent aldehyde reductase Ahr | - |
| HED12_RS07385 () | 1404137..1404700 | - | 564 | WP_000896740.1 | gluconokinase | - |
| HED12_RS07390 () | 1404917..1405948 | + | 1032 | WP_001197423.1 | L-idonate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|