MGE detailed information
MGE type: Conjugative plasmid MGE length: 122112 bp
Accession: NZ_CP056076 Location: 1..122112 Organism: Escherichia coli strain MS1170 Replicon: plasmid pMS1170_1
Accession: NZ_CP056076 Location: 1..122112 Organism: Escherichia coli strain MS1170 Replicon: plasmid pMS1170_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HED12_RS00010 () | 1..276 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| HED12_RS00015 () | 407..1189 | - | 783 | WP_058799171.1 | site-specific integrase | - |
| HED12_RS00020 () | 1191..1604 | - | 414 | WP_000465034.1 | hypothetical protein | - |
| HED12_RS00025 () | 2174..2434 | + | 261 | WP_000343102.1 | hypothetical protein | - |
| HED12_RS00030 () | 2431..3021 | + | 591 | WP_202791656.1 | hypothetical protein | - |
| HED12_RS00035 () | 3039..3386 | - | 348 | WP_000142424.1 | hypothetical protein | - |
| HED12_RS00040 () | 3505..3853 | + | 349 | Protein_7 | colicin transporter | - |
| HED12_RS00045 () | 3871..5750 | - | 1880 | Protein_8 | colicin | - |
| HED12_RS00050 () | 6029..7375 | - | 1347 | WP_001132019.1 | hypothetical protein | - |
| HED12_RS00055 () | 7729..8331 | + | 603 | WP_000517689.1 | hypothetical protein | - |
| HED12_RS00060 () | 8387..8881 | + | 495 | WP_001442119.1 | hypothetical protein | - |
| HED12_RS00065 () | 8881..9147 | + | 267 | WP_000627831.1 | hypothetical protein | - |
| HED12_RS00070 () | 9624..10040 | - | 417 | WP_031610367.1 | hypothetical protein | - |
| HED12_RS00075 () | 10049..13015 | - | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| HED12_RS00080 () | 13018..13578 | - | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| HED12_RS00085 () | 13704..14054 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| HED12_RS00090 () | 14257..15270 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| HED12_RS00095 () | 15419..16210 | + | 792 | WP_001206316.1 | Streptomycin 3''-adenylyltransferase | ARG |
| HED12_RS00100 () | 16377..17276 | + | 900 | WP_000131886.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| HED12_RS00105 () | 17483..17803 | + | 321 | WP_000535481.1 | co-chaperone GroES | - |
| HED12_RS00110 () | 17859..19496 | + | 1638 | WP_000719078.1 | 60 kDa chaperonin | VF |
| HED12_RS00115 () | 19685..21214 | + | 1530 | WP_001137772.1 | IS91 family transposase ISVsa3 | Transposase |
| HED12_RS00120 () | 21482..22717 | + | 1236 | WP_001137513.1 | IS256 family transposase ISEc58 | Transposase |
| HED12_RS00125 () | 22935..23282 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| HED12_RS00130 () | 23276..24115 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| HED12_RS00135 () | 24243..24743 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| HED12_RS00140 () | 24919..25701 | - | 783 | WP_001163403.1 | IS21 family transposase IS1326 | Transposase |
| HED12_RS00145 () | 25691..27214 | - | 1524 | WP_001324342.1 | IS21 family transposase IS1326 | Transposase |
| HED12_RS00150 () | 27316..28176 | - | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| HED12_RS00155 () | 28179..29858 | - | 1680 | WP_000179844.1 | DDE-type integrase/transposase/recombinase | - |
| HED12_RS00160 () | 29933..30601 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| HED12_RS00165 () | 30637..30873 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| HED12_RS00170 () | 30870..31232 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| HED12_RS00175 () | 31250..32944 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| HED12_RS00180 () | 32996..33418 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| HED12_RS00185 () | 33454..33729 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| HED12_RS00190 () | 33743..34093 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| HED12_RS00195 () | 34165..34599 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| HED12_RS00200 () | 35602..35844 | + | 243 | WP_000844627.1 | transposase | - |
| HED12_RS00205 () | 35876..36526 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HED12_RS00210 () | 36632..37831 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| HED12_RS00215 () | 37863..38723 | - | 861 | WP_000493383.1 | EamA family transporter | - |
| HED12_RS00220 () | 38732..39346 | - | 615 | Protein_43 | helix-turn-helix domain-containing protein | - |
| HED12_RS00225 () | 39308..39466 | + | 159 | WP_197711125.1 | MerR family transcriptional regulator | - |
| HED12_RS00230 () | 39703..40551 | - | 849 | WP_001058005.1 | 3'-5' exonuclease | - |
| HED12_RS00235 () | 40597..40878 | - | 282 | WP_139508268.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HED12_RS00240 () | 40875..41144 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| HED12_RS00245 () | 41199..41357 | - | 159 | WP_000841008.1 | hypothetical protein | - |
| HED12_RS00250 () | 42050..42914 | - | 865 | Protein_49 | incFII family plasmid replication initiator RepA | - |
| HED12_RS00255 () | 43624..44265 | + | 642 | WP_077250484.1 | transcription termination factor NusG | - |
| HED12_RS00260 () | 44407..45072 | + | 666 | WP_029391921.1 | hypothetical protein | - |
| HED12_RS00265 () | 45130..45591 | + | 462 | WP_174843148.1 | PilI type IV pilus biogenesis protein | - |
| HED12_RS00270 () | 46096..46491 | - | 396 | WP_029391920.1 | hypothetical protein | - |
| HED12_RS00275 () | 46613..47683 | + | 1071 | WP_029391919.1 | hypothetical protein | VF |
| HED12_RS00280 () | 47688..48125 | + | 438 | WP_021532695.1 | type IV pilus biogenesis protein PilM | - |
| HED12_RS00285 () | 48156..49775 | + | 1620 | WP_021532696.1 | Outer membrane lipoprotein BfpB | VF |
| HED12_RS00290 () | 49796..51091 | + | 1296 | WP_021532697.1 | type 4b pilus protein PilO2 | - |
| HED12_RS00295 () | 51081..51533 | + | 453 | WP_029391918.1 | hypothetical protein | VF |
| HED12_RS00300 () | 51582..52136 | + | 555 | WP_021532699.1 | hypothetical protein | - |
| HED12_RS00305 () | 52232..52828 | + | 597 | WP_029391917.1 | hypothetical protein | - |
| HED12_RS00310 () | 52925..54433 | + | 1509 | WP_021532701.1 | Type II secretion system protein E | VF |
| HED12_RS00315 () | 54435..55535 | + | 1101 | WP_029391916.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HED12_RS00320 () | 55586..56122 | + | 537 | WP_029391915.1 | cleavage protein | - |
| HED12_RS00325 () | 56181..56657 | + | 477 | WP_029391914.1 | hypothetical protein | VF |
| HED12_RS00330 () | 56674..57324 | + | 651 | WP_029391913.1 | prepilin peptidase | - |
| HED12_RS00335 () | 57321..58565 | + | 1245 | WP_119799357.1 | hypothetical protein | VF |
| HED12_RS00340 () | 59338..59625 | + | 288 | WP_119799359.1 | shufflon protein B | - |
| HED12_RS00345 () | 60050..60289 | + | 240 | WP_000271302.1 | hypothetical protein | - |
| HED12_RS00350 () | 60294..60692 | - | 399 | WP_119837423.1 | phage tail protein | - |
| HED12_RS00355 () | 60747..61918 | + | 1172 | Protein_70 | site-specific integrase | - |
| HED12_RS00360 () | 61959..62240 | + | 282 | WP_029391927.1 | hypothetical protein | - |
| HED12_RS00365 () | 62359..62905 | + | 547 | Protein_72 | hypothetical protein | - |
| HED12_RS00370 () | 63156..63977 | + | 822 | WP_000804089.1 | hypothetical protein | - |
| HED12_RS00375 () | 64067..65269 | + | 1203 | WP_029391929.1 | conjugal transfer protein TraF | - |
| HED12_RS00380 () | 65409..65579 | + | 171 | WP_001597011.1 | hypothetical protein | - |
| HED12_RS00385 () | 65628..66080 | + | 453 | WP_001081199.1 | DotD/TraH family lipoprotein | - |
| HED12_RS00390 () | 66077..66913 | + | 837 | WP_029391930.1 | hypothetical protein | VF |
| HED12_RS00395 () | 66897..68045 | + | 1149 | WP_000625247.1 | putative protein YggR | VF |
| HED12_RS00400 () | 68042..68332 | + | 291 | WP_000817799.1 | hypothetical protein | - |
| HED12_RS00405 () | 68396..72457 | + | 4062 | WP_029391931.1 | DNA primase | - |
| HED12_RS00410 () | 72474..72824 | + | 351 | WP_021532713.1 | hypothetical protein | - |
| HED12_RS00415 () | 72836..73531 | + | 696 | WP_029391932.1 | DotI/IcmL family type IV secretion protein | - |
| HED12_RS00420 () | 73542..74516 | + | 975 | WP_029391933.1 | hypothetical protein | VF |
| HED12_RS00425 () | 74520..75851 | + | 1332 | WP_029391934.1 | conjugal transfer protein TraO | - |
| HED12_RS00430 () | 75848..76561 | + | 714 | WP_021532717.1 | conjugal transfer protein TraP | - |
| HED12_RS00435 () | 76561..77088 | + | 528 | WP_001379391.1 | conjugal transfer protein TraQ | - |
| HED12_RS00440 () | 77135..77533 | + | 399 | WP_029391936.1 | hypothetical protein | - |
| HED12_RS00445 () | 77590..77841 | + | 252 | WP_021532719.1 | hypothetical protein | - |
| HED12_RS00450 () | 77756..78574 | + | 819 | WP_072132149.1 | conjugal transfer protein TraT | - |
| HED12_RS00455 () | 78629..78814 | + | 186 | WP_029394194.1 | hypothetical protein | - |
| HED12_RS00460 () | 78911..80173 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| HED12_RS00465 () | 80497..81642 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| HED12_RS00470 () | 81736..82269 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| HED12_RS00475 () | 82266..82583 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| HED12_RS00480 () | 82821..83087 | + | 267 | Protein_95 | hypothetical protein | - |
| HED12_RS00485 () | 83087..83467 | + | 381 | WP_000690886.1 | hypothetical protein | - |
| HED12_RS00490 () | 83643..86687 | + | 3045 | WP_202791653.1 | ATP-binding protein | - |
| HED12_RS00495 () | 86687..87304 | + | 618 | WP_029391943.1 | hypothetical protein | - |
| HED12_RS00500 () | 87265..88470 | + | 1206 | WP_029391944.1 | conjugal transfer protein TraW | - |
| HED12_RS00505 () | 88467..89036 | + | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| HED12_RS00510 () | 89109..91276 | + | 2168 | Protein_101 | DotA/TraY family protein | - |
| HED12_RS00515 () | 91364..92017 | + | 654 | WP_029391946.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HED12_RS00520 () | 92082..92291 | - | 210 | WP_000062946.1 | HEAT repeat domain-containing protein | - |
| HED12_RS00525 () | 92673..92834 | + | 162 | WP_021580032.1 | hypothetical protein | - |
| HED12_RS00530 () | 92831..92983 | - | 153 | WP_021532728.1 | Hok/Gef family protein | - |
| HED12_RS00535 () | 93312..93554 | + | 243 | WP_029391947.1 | hypothetical protein | - |
| HED12_RS00540 () | 93853..94221 | + | 369 | WP_029391948.1 | hypothetical protein | - |
| HED12_RS00545 () | 94225..94440 | + | 216 | WP_000266543.1 | hypothetical protein | - |
| HED12_RS00550 () | 94638..95261 | - | 624 | WP_001155252.1 | DNA-binding protein | - |
| HED12_RS00555 () | 95421..95888 | + | 468 | WP_000598962.1 | thermonuclease family protein | - |
| HED12_RS00560 () | 96039..96215 | + | 177 | WP_032172741.1 | hypothetical protein | - |
| HED12_RS00565 () | 96672..98042 | + | 1371 | WP_172948491.1 | conjugal transfer protein TrbA | - |
| HED12_RS00570 () | 98039..99157 | + | 1119 | WP_029391999.1 | DsbC family protein | - |
| HED12_RS00575 () | 99138..101438 | + | 2301 | WP_202791654.1 | TraM recognition domain-containing protein | - |
| HED12_RS00580 () | 101659..104379 | - | 2721 | WP_029391987.1 | Protein TraI | Relaxase |
| HED12_RS00585 () | 104391..104723 | - | 333 | WP_001291058.1 | hypothetical protein | - |
| HED12_RS00590 () | 104956..105291 | + | 336 | WP_000157103.1 | hypothetical protein | - |
| HED12_RS00595 () | 105377..106225 | - | 849 | WP_021532736.1 | DUF4942 domain-containing protein | - |
| HED12_RS00600 () | 106574..106771 | + | 198 | WP_029392003.1 | hypothetical protein | - |
| HED12_RS00605 () | 106805..107056 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| HED12_RS00610 () | 107087..107284 | - | 198 | WP_072224325.1 | hypothetical protein | - |
| HED12_RS00615 () | 107307..108224 | - | 918 | WP_029392002.1 | Recombination-promoting nuclease RpnA | VF |
| HED12_RS00620 () | 108289..108555 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| HED12_RS00625 () | 108647..109081 | - | 435 | WP_029392001.1 | hypothetical protein | - |
| HED12_RS00630 () | 109449..109763 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| HED12_RS00635 () | 109834..110025 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| HED12_RS00640 () | 110022..110444 | - | 423 | WP_000271744.1 | DUF1380 family protein | - |
| HED12_RS00645 () | 110491..110793 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| HED12_RS00650 () | 111332..112108 | - | 777 | WP_052929989.1 | hypothetical protein | - |
| HED12_RS00655 () | 112154..112588 | - | 435 | WP_000274500.1 | DUF1380 family protein | - |
| HED12_RS00660 () | 112602..112823 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| HED12_RS00665 () | 112824..113507 | - | 684 | WP_000086147.1 | DNA methylase | - |
| HED12_RS00670 () | 113583..113894 | - | 312 | WP_031942433.1 | hypothetical protein | - |
| HED12_RS00675 () | 113891..114793 | - | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| HED12_RS00680 () | 115211..115459 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| HED12_RS00685 () | 115456..115893 | + | 438 | WP_058799169.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HED12_RS00690 () | 115893..117002 | + | 1110 | Protein_137 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HED12_RS00695 () | 117056..117733 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| HED12_RS00700 () | 117733..118080 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| HED12_RS00705 () | 118100..119656 | + | 1557 | WP_202791655.1 | IS66 family transposase ISCro1 | Transposase |
| HED12_RS00710 () | 119702..119872 | + | 171 | Protein_141 | DUF4113 domain-containing protein | - |
| HED12_RS00715 () | 119877..120270 | - | 394 | Protein_142 | plasmid partitioning/stability family protein | - |
| HED12_RS00720 () | 120275..121246 | - | 972 | WP_001103691.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|