MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94009 bp
Accession: NZ_CP055677 Location: 1..94009 Organism: Escherichia fergusonii strain RHB28-C13 Replicon: plasmid pRHB28-C13_3
Accession: NZ_CP055677 Location: 1..94009 Organism: Escherichia fergusonii strain RHB28-C13 Replicon: plasmid pRHB28-C13_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVY52_RS24275 () | 1..861 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| HVY52_RS24280 () | 1420..2616 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| HVY52_RS24285 () | 2633..3634 | + | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| HVY52_RS24290 () | 3860..5566 | + | 1707 | WP_000067710.1 | hypothetical protein | - |
| HVY52_RS24295 () | 5627..7216 | + | 1590 | WP_000085145.1 | hypothetical protein | - |
| HVY52_RS24300 () | 7226..8041 | + | 816 | WP_000041756.1 | hypothetical protein | - |
| HVY52_RS24305 () | 8077..8658 | + | 582 | WP_000035301.1 | hypothetical protein | - |
| HVY52_RS24310 () | 8670..9179 | + | 510 | WP_000509939.1 | hypothetical protein | - |
| HVY52_RS24315 () | 9296..9451 | - | 156 | WP_001313475.1 | type I toxin-antitoxin system toxin HokD | - |
| HVY52_RS24320 () | 9633..9878 | - | 246 | WP_001702262.1 | hypothetical protein | - |
| HVY52_RS24325 () | 9929..10774 | - | 846 | WP_023154394.1 | hypothetical protein | - |
| HVY52_RS24330 () | 10804..11604 | - | 801 | WP_181203524.1 | phage antirepressor KilAC domain-containing protein | - |
| HVY52_RS24335 () | 11769..12812 | - | 1044 | WP_000743162.1 | phage antirepressor Ant | - |
| HVY52_RS24340 () | 12809..13030 | - | 222 | WP_000245708.1 | host cell division inhibitor Icd-like protein | - |
| HVY52_RS24345 () | 13650..14162 | + | 513 | WP_000039791.1 | hypothetical protein | - |
| HVY52_RS24350 () | 14166..14705 | + | 540 | WP_001033469.1 | DUF5384 family protein | - |
| HVY52_RS24355 () | 14786..15352 | + | 567 | WP_000188920.1 | hypothetical protein | - |
| HVY52_RS24360 () | 15363..15974 | + | 612 | WP_000523980.1 | hypothetical protein | - |
| HVY52_RS24365 () | 15989..16870 | + | 882 | WP_000926346.1 | hypothetical protein | - |
| HVY52_RS24370 () | 16952..20374 | + | 3423 | WP_042102742.1 | transglycosylase SLT domain-containing protein | - |
| HVY52_RS24375 () | 20374..20730 | + | 357 | WP_000002800.1 | hypothetical protein | - |
| HVY52_RS24380 () | 20727..22160 | + | 1434 | WP_000047920.1 | bleomycin hydrolase | - |
| HVY52_RS24385 () | 22160..22996 | + | 837 | WP_001189838.1 | hypothetical protein | - |
| HVY52_RS24390 () | 23075..23509 | + | 435 | WP_001286328.1 | hypothetical protein | - |
| HVY52_RS24395 () | 23521..27441 | + | 3921 | WP_111975836.1 | tail fiber protein | - |
| HVY52_RS24400 () | 27460..28005 | + | 546 | WP_023356302.1 | tail assembly chaperone | - |
| HVY52_RS24405 () | 28040..28564 | - | 525 | WP_024175644.1 | tail fiber assembly protein | - |
| HVY52_RS24410 () | 28564..30231 | - | 1668 | WP_089615660.1 | phage tail protein | - |
| HVY52_RS24415 () | 30621..31181 | - | 561 | WP_000905118.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| HVY52_RS24420 () | 31309..31590 | + | 282 | WP_000332809.1 | hypothetical protein | - |
| HVY52_RS24425 () | 31658..31987 | + | 330 | WP_000887652.1 | holin | - |
| HVY52_RS24430 () | 31984..32427 | + | 444 | WP_000580776.1 | hypothetical protein | - |
| HVY52_RS24435 () | 32414..33016 | + | 603 | WP_000164724.1 | hypothetical protein | - |
| HVY52_RS24440 () | 33018..34937 | + | 1920 | WP_042102857.1 | phage protein DarA | - |
| HVY52_RS24445 () | 34934..35299 | + | 366 | WP_000175480.1 | hypothetical protein | - |
| HVY52_RS24450 () | 35312..38299 | + | 2988 | WP_023356275.1 | hypothetical protein | - |
| HVY52_RS24455 () | 38289..38597 | + | 309 | WP_023356276.1 | hypothetical protein | - |
| HVY52_RS24460 () | 38629..39723 | - | 1095 | WP_000610386.1 | hypothetical protein | - |
| HVY52_RS24465 () | 39716..40510 | - | 795 | WP_023356277.1 | hypothetical protein | - |
| HVY52_RS24470 () | 40708..41196 | - | 489 | WP_000068865.1 | single-stranded DNA-binding protein | - |
| HVY52_RS24475 () | 41366..41923 | + | 558 | WP_001345478.1 | lysozyme | - |
| HVY52_RS24480 () | 42215..43234 | - | 1020 | WP_000132939.1 | head processing protein | - |
| HVY52_RS24485 () | 43227..44936 | - | 1710 | WP_042004953.1 | hypothetical protein | - |
| HVY52_RS24490 () | 45012..51779 | + | 6768 | WP_112844475.1 | N-6 DNA methylase | - |
| HVY52_RS24495 () | 51813..52253 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| HVY52_RS24500 () | 52250..52498 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| HVY52_RS24505 () | 52540..53844 | - | 1305 | WP_000006034.1 | SIR2 family protein | - |
| HVY52_RS24510 () | 53901..54542 | - | 642 | WP_001376241.1 | hypothetical protein | - |
| HVY52_RS24515 () | 54731..55291 | - | 561 | WP_001776220.1 | Ref family protein | - |
| HVY52_RS24520 () | 55539..55850 | - | 312 | WP_001749391.1 | hypothetical protein | - |
| HVY52_RS24525 () | 55901..56932 | - | 1032 | WP_001776219.1 | site-specific integrase | - |
| HVY52_RS24530 () | 56940..57161 | - | 222 | WP_000542336.1 | hypothetical protein | - |
| HVY52_RS24535 () | 57766..57975 | + | 210 | WP_000874154.1 | hypothetical protein | - |
| HVY52_RS24540 () | 58086..58937 | + | 852 | WP_000611656.1 | hypothetical protein | - |
| HVY52_RS24545 () | 58962..60446 | - | 1485 | WP_000124150.1 | terminase | - |
| HVY52_RS24550 () | 60446..61639 | - | 1194 | WP_000219625.1 | hypothetical protein | - |
| HVY52_RS24555 () | 61725..62177 | - | 453 | WP_001326849.1 | late promoter-activating protein | - |
| HVY52_RS24560 () | 62266..63309 | - | 1044 | WP_112075408.1 | DUF968 domain-containing protein | - |
| HVY52_RS24565 () | 63337..63516 | - | 180 | WP_001339207.1 | hypothetical protein | - |
| HVY52_RS24570 () | 63521..63901 | - | 381 | WP_001216045.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| HVY52_RS24575 () | 63901..64122 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HVY52_RS24580 () | 64195..64584 | - | 390 | WP_000506730.1 | DNA repair protein | - |
| HVY52_RS24585 () | 64759..65343 | + | 585 | WP_023356284.1 | hypothetical protein | - |
| HVY52_RS24590 () | 65344..65706 | + | 363 | WP_042102765.1 | hypothetical protein | - |
| HVY52_RS24595 () | 65718..65957 | - | 240 | WP_023356286.1 | DNA polymerase III subunit theta | - |
| HVY52_RS24600 () | 65960..66160 | - | 201 | WP_032145427.1 | hypothetical protein | - |
| HVY52_RS24605 () | 66272..67030 | - | 759 | WP_032353390.1 | hypothetical protein | - |
| HVY52_RS24610 () | 67027..67401 | - | 375 | WP_032353387.1 | hypothetical protein | - |
| HVY52_RS24615 () | 67408..67701 | - | 294 | WP_121844072.1 | hypothetical protein | - |
| HVY52_RS24620 () | 67880..68113 | - | 234 | WP_000517421.1 | hypothetical protein | - |
| HVY52_RS24625 () | 68196..68891 | - | 696 | WP_052896298.1 | DUF551 domain-containing protein | - |
| HVY52_RS24630 () | 68888..69403 | - | 516 | WP_001229203.1 | hypothetical protein | - |
| HVY52_RS24635 () | 69405..69593 | - | 189 | WP_047091814.1 | hypothetical protein | - |
| HVY52_RS24640 () | 69590..69766 | - | 177 | WP_000797289.1 | hypothetical protein | - |
| HVY52_RS24645 () | 69763..69939 | - | 177 | WP_001261538.1 | hypothetical protein | - |
| HVY52_RS24650 () | 69939..70688 | - | 750 | WP_023356291.1 | ead/Ea22-like family protein | - |
| HVY52_RS24655 () | 70685..71329 | - | 645 | WP_109548817.1 | hypothetical protein | - |
| HVY52_RS24660 () | 71322..71582 | - | 261 | WP_001471568.1 | hypothetical protein | - |
| HVY52_RS24665 () | 71575..72156 | - | 582 | WP_000675643.1 | hypothetical protein | - |
| HVY52_RS24670 () | 72351..72857 | - | 507 | WP_023356293.1 | hypothetical protein | - |
| HVY52_RS24675 () | 72930..74192 | - | 1263 | WP_096268633.1 | hypothetical protein | - |
| HVY52_RS24680 () | 74494..75195 | - | 702 | WP_000684869.1 | hypothetical protein | - |
| HVY52_RS24685 () | 75192..75869 | - | 678 | WP_042032526.1 | metallophosphoesterase | - |
| HVY52_RS24690 () | 75866..76492 | - | 627 | WP_042032528.1 | norphogenetic protein | - |
| HVY52_RS24695 () | 76994..77149 | - | 156 | WP_000008815.1 | hypothetical protein | - |
| HVY52_RS24700 () | 77216..77795 | - | 580 | Protein_85 | VRR-NUC domain-containing protein | - |
| HVY52_RS24705 () | 77798..78043 | - | 246 | WP_000840931.1 | hypothetical protein | - |
| HVY52_RS24710 () | 78190..78567 | + | 378 | WP_000235786.1 | hypothetical protein | - |
| HVY52_RS24715 () | 78577..79794 | + | 1218 | WP_001141908.1 | hypothetical protein | - |
| HVY52_RS24720 () | 79798..80526 | + | 729 | WP_000896801.1 | hypothetical protein | - |
| HVY52_RS24725 () | 80513..81298 | + | 786 | WP_032163782.1 | hypothetical protein | - |
| HVY52_RS24730 () | 81300..82316 | + | 1017 | WP_042032533.1 | hypothetical protein | - |
| HVY52_RS24735 () | 82309..82941 | + | 633 | WP_000535203.1 | hypothetical protein | - |
| HVY52_RS24740 () | 82988..83986 | - | 999 | WP_001198667.1 | hypothetical protein | - |
| HVY52_RS24745 () | 83986..85350 | - | 1365 | WP_046644528.1 | replicative DNA helicase | - |
| HVY52_RS24755 () | 85818..85982 | - | 165 | WP_000234829.1 | DUF3927 family protein | - |
| HVY52_RS24760 () | 85982..86407 | - | 426 | WP_000900640.1 | tellurite/colicin resistance protein | - |
| HVY52_RS24775 () | 87966..90230 | - | 2265 | WP_023351463.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| HVY52_RS24780 () | 90227..91132 | - | 906 | WP_046644524.1 | recombination-associated protein RdgC | - |
| HVY52_RS24785 () | 91125..91409 | - | 285 | WP_001177860.1 | hypothetical protein | - |
| HVY52_RS24790 () | 91872..92660 | + | 789 | WP_000890206.1 | hypothetical protein | - |
| HVY52_RS24795 () | 92700..93122 | + | 423 | WP_000007765.1 | hypothetical protein | - |
| HVY52_RS24800 () | 93148..93288 | + | 141 | WP_000336812.1 | hypothetical protein | - |
| HVY52_RS24805 () | 93300..93692 | + | 393 | WP_001281114.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|