MGE detailed information
MGE type: Prophage MGE length: 53798 bp
Accession: NZ_CP055675 Location: 2037393..2091190 Organism: Escherichia fergusonii strain RHB28-C13 Replicon: chromosome
Accession: NZ_CP055675 Location: 2037393..2091190 Organism: Escherichia fergusonii strain RHB28-C13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVY52_RS09705 () | 2034866..2035939 | - | 1074 | WP_104917597.1 | acyltransferase family protein | - |
| HVY52_RS09710 () | 2036201..2037400 | + | 1200 | WP_000284704.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| HVY52_RS09715 () | 2037393..2038094 | + | 702 | WP_001033707.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| HVY52_RS09720 () | 2038094..2039338 | + | 1245 | WP_001251354.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| HVY52_RS09725 () | 2039367..2040278 | + | 912 | WP_000291279.1 | N-acetylglucosamine kinase | - |
| HVY52_RS09730 () | 2040294..2041115 | + | 822 | WP_000952705.1 | NAD-dependent protein deacylase | - |
| HVY52_RS09735 () | 2041252..2042037 | - | 786 | WP_000720224.1 | TPM domain-containing protein | - |
| HVY52_RS09740 () | 2042034..2042495 | - | 462 | WP_002431574.1 | DUF3592 domain-containing protein | - |
| HVY52_RS09745 () | 2042553..2043599 | - | 1047 | WP_000759307.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| HVY52_RS09750 () | 2043596..2044390 | - | 795 | WP_000580312.1 | spermidine/putrescine ABC transporter permease PotC | - |
| HVY52_RS09755 () | 2044557..2045675 | - | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| HVY52_RS09760 () | 2045644..2045913 | - | 270 | WP_000003742.1 | excisionase | - |
| HVY52_RS09765 () | 2045975..2048446 | - | 2472 | WP_181203390.1 | exonuclease | - |
| HVY52_RS09770 () | 2048540..2048731 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| HVY52_RS09775 () | 2048728..2048916 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| HVY52_RS09780 () | 2049316..2049480 | + | 165 | WP_001331716.1 | hypothetical protein | - |
| HVY52_RS09785 () | 2049484..2049702 | - | 219 | WP_001171946.1 | hypothetical protein | - |
| HVY52_RS09790 () | 2049774..2050073 | - | 300 | WP_042046576.1 | hypothetical protein | - |
| HVY52_RS09795 () | 2050427..2050765 | - | 339 | WP_001397087.1 | peptidase S24-like family protein | - |
| HVY52_RS09800 () | 2051157..2051399 | + | 243 | WP_000747951.1 | hypothetical protein | - |
| HVY52_RS09805 () | 2051383..2051808 | + | 426 | WP_000693883.1 | Rha family transcriptional regulator | - |
| HVY52_RS09810 () | 2051880..2052950 | + | 1071 | WP_023154928.1 | phage replisome organizer protein | - |
| HVY52_RS09815 () | 2052991..2053416 | + | 426 | WP_021546098.1 | DUF977 family protein | - |
| HVY52_RS09820 () | 2053591..2054256 | + | 666 | WP_000150294.1 | epoxyqueuosine reductase QueH | - |
| - () | 2054424..2054482 | - | 59 | - | - | Antitoxin Detail |
| HVY52_RS09825 () | 2054494..2054649 | + | 156 | WP_000813260.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| HVY52_RS09830 () | 2054793..2055185 | + | 393 | WP_000737636.1 | hypothetical protein | - |
| HVY52_RS09835 () | 2055482..2055760 | + | 279 | WP_024175747.1 | hypothetical protein | - |
| HVY52_RS09840 () | 2055762..2056811 | + | 1050 | WP_048949148.1 | DUF968 domain-containing protein | - |
| HVY52_RS09845 () | 2056824..2057183 | + | 360 | WP_089585352.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HVY52_RS09850 () | 2057180..2057869 | + | 690 | WP_181203391.1 | antiterminator | - |
| HVY52_RS09875 () | 2058666..2058881 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| HVY52_RS09880 () | 2058886..2059236 | + | 351 | WP_001545374.1 | YdfR family protein | - |
| HVY52_RS09885 () | 2059300..2059833 | + | 534 | WP_000992100.1 | lysozyme | - |
| HVY52_RS09890 () | 2060050..2060232 | + | 183 | WP_032145233.1 | Rz1 family lipoprotein | - |
| HVY52_RS09895 () | 2060337..2060687 | + | 351 | WP_001140102.1 | HNH endonuclease | - |
| HVY52_RS09900 () | 2060823..2061194 | - | 372 | WP_181203392.1 | hypothetical protein | - |
| HVY52_RS09905 () | 2061241..2062812 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| HVY52_RS09910 () | 2062832..2063179 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| HVY52_RS09915 () | 2063179..2063856 | - | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| HVY52_RS09920 () | 2064274..2064756 | + | 483 | WP_001312917.1 | phage terminase small subunit P27 family | - |
| HVY52_RS09925 () | 2064756..2066513 | + | 1758 | WP_001140905.1 | terminase large subunit | - |
| HVY52_RS09930 () | 2066525..2066707 | + | 183 | WP_000478564.1 | hypothetical protein | - |
| HVY52_RS09935 () | 2066707..2067948 | + | 1242 | WP_000466255.1 | phage portal protein | - |
| HVY52_RS09940 () | 2067926..2068576 | + | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| HVY52_RS09945 () | 2068591..2069796 | + | 1206 | WP_000257522.1 | phage major capsid protein | - |
| HVY52_RS09950 () | 2069847..2070035 | + | 189 | WP_000601355.1 | hypothetical protein | - |
| HVY52_RS09955 () | 2070047..2070352 | + | 306 | WP_000983037.1 | head-tail connector protein | - |
| HVY52_RS09960 () | 2070361..2070699 | + | 339 | WP_001147820.1 | phage head closure protein | - |
| HVY52_RS09965 () | 2070699..2071145 | + | 447 | WP_000347790.1 | HK97 gp10 family phage protein | - |
| HVY52_RS09970 () | 2071142..2071486 | + | 345 | WP_181203393.1 | DUF3168 domain-containing protein | - |
| HVY52_RS09975 () | 2071547..2072251 | + | 705 | WP_039022675.1 | immunoglobulin domain-containing protein | - |
| HVY52_RS09980 () | 2072266..2072637 | + | 372 | WP_000164661.1 | phage tail assembly chaperone | - |
| HVY52_RS09985 () | 2072661..2072939 | + | 279 | WP_000978929.1 | DUF4035 domain-containing protein | - |
| HVY52_RS09990 () | 2072997..2073338 | + | 342 | WP_000394908.1 | zinc ribbon domain-containing protein | - |
| HVY52_RS09995 () | 2073387..2076626 | + | 3240 | WP_181203394.1 | phage tail tape measure protein | - |
| HVY52_RS10000 () | 2076619..2076960 | + | 342 | WP_001115183.1 | phage tail protein | - |
| HVY52_RS10005 () | 2076960..2077658 | + | 699 | WP_001152453.1 | phage minor tail protein L | - |
| HVY52_RS10010 () | 2077664..2078407 | + | 744 | WP_181203395.1 | C40 family peptidase | - |
| HVY52_RS10015 () | 2078305..2078952 | + | 648 | WP_137440942.1 | tail assembly protein | - |
| HVY52_RS10020 () | 2079013..2082501 | + | 3489 | WP_181203396.1 | host specificity protein J | - |
| HVY52_RS10025 () | 2082569..2083168 | + | 600 | WP_001233185.1 | Outer membrane protein X | VF |
| HVY52_RS10030 () | 2083233..2085983 | + | 2751 | WP_181203397.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HVY52_RS10035 () | 2085983..2086564 | + | 582 | WP_181203398.1 | tail fiber assembly protein | - |
| HVY52_RS10040 () | 2086797..2087660 | - | 864 | WP_148049176.1 | spermidine/putrescine ABC transporter permease PotB | - |
| HVY52_RS10045 () | 2087644..2088780 | - | 1137 | WP_000531585.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| HVY52_RS10050 () | 2089029..2090255 | + | 1227 | WP_046077491.1 | peptidase T | - |
| HVY52_RS10055 () | 2090306..2091190 | - | 885 | WP_181203399.1 | D-hexose-6-phosphate mutarotase | - |
| HVY52_RS10060 () | 2091265..2092260 | - | 996 | WP_002431573.1 | glyceraldehyde-3-phosphate dehydrogenase | - |
| HVY52_RS10065 () | 2092603..2093016 | + | 414 | WP_181203400.1 | peptide-methionine (R)-S-oxide reductase MsrB | - |
| HVY52_RS10070 () | 2093058..2093336 | + | 279 | WP_002431572.1 | YeaC family protein | - |
| HVY52_RS10075 () | 2093398..2094039 | - | 642 | WP_181203401.1 | bifunctional nicotinamidase/pyrazinamidase | - |
| HVY52_RS10080 () | 2094050..2095066 | - | 1017 | WP_015953356.1 | asparaginase | - |
| HVY52_RS10085 () | 2095182..2095892 | - | 711 | WP_181203402.1 | SIMPL domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|