MGE detailed information
MGE type: Prophage MGE length: 65306 bp
Accession: NZ_CP055599 Location: 1659664..1724969 Organism: Escherichia fergusonii strain RHB41-C23 Replicon: chromosome
Accession: NZ_CP055599 Location: 1659664..1724969 Organism: Escherichia fergusonii strain RHB41-C23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV014_RS08035 () | 1654766..1655857 | - | 1092 | WP_000521933.1 | EAL domain-containing protein | - |
| HV014_RS08040 () | 1657002..1657481 | + | 480 | WP_181199262.1 | GNAT family N-acetyltransferase | - |
| HV014_RS08045 () | 1657762..1658613 | + | 852 | WP_001195265.1 | aldo/keto reductase | - |
| HV014_RS08050 () | 1658640..1659629 | + | 990 | WP_181199263.1 | aldo/keto reductase | - |
| HV014_RS08055 () | 1659664..1660557 | - | 894 | WP_000910705.1 | HTH-type transcriptional regulator PgrR | VF |
| HV014_RS08060 () | 1660643..1660954 | + | 312 | Protein_1578 | hypothetical protein | - |
| HV014_RS08065 () | 1661090..1661191 | + | 102 | WP_000662204.1 | hypothetical protein | - |
| HV014_RS08070 () | 1661332..1661597 | + | 266 | Protein_1580 | tyrosine-type recombinase/integrase | - |
| HV014_RS08075 () | 1661774..1663051 | + | 1278 | WP_173672907.1 | hypothetical protein ; Integrase | Integrase |
| HV014_RS08080 () | 1663133..1663846 | - | 714 | WP_096985338.1 | hypothetical protein | - |
| HV014_RS08085 () | 1663881..1665710 | - | 1830 | WP_096985337.1 | hypothetical protein | - |
| HV014_RS08090 () | 1665731..1665934 | - | 204 | WP_000452041.1 | hypothetical protein | - |
| HV014_RS08095 () | 1666021..1667049 | - | 1029 | WP_096985335.1 | major capsid protein | - |
| HV014_RS08100 () | 1667068..1667430 | - | 363 | WP_096985334.1 | hypothetical protein | - |
| HV014_RS08105 () | 1667427..1667639 | - | 213 | WP_000898166.1 | hypothetical protein | - |
| HV014_RS08110 () | 1667980..1668318 | - | 339 | WP_032220863.1 | hypothetical protein | - |
| HV014_RS08115 () | 1668320..1668727 | - | 408 | WP_028985909.1 | hypothetical protein | - |
| HV014_RS08120 () | 1668860..1669135 | - | 276 | WP_089623217.1 | hypothetical protein | - |
| HV014_RS08125 () | 1669147..1669815 | - | 669 | WP_089638754.1 | helix-turn-helix domain-containing protein | - |
| HV014_RS08130 () | 1669870..1670040 | - | 171 | WP_000005469.1 | hypothetical protein | - |
| HV014_RS08135 () | 1670060..1670248 | - | 189 | WP_000870969.1 | hypothetical protein | - |
| HV014_RS08140 () | 1672384..1672923 | + | 540 | WP_059250298.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| HV014_RS08145 () | 1673363..1673521 | - | 159 | WP_000788777.1 | hypothetical protein | - |
| HV014_RS08150 () | 1674615..1675199 | - | 585 | WP_181199264.1 | tail fiber assembly protein | - |
| HV014_RS08155 () | 1675199..1677124 | - | 1926 | WP_181199265.1 | phage tail protein | - |
| HV014_RS08160 () | 1677411..1677845 | - | 435 | Protein_1598 | host specificity protein J | - |
| HV014_RS08165 () | 1677843..1678157 | - | 315 | Protein_1599 | phage terminase large subunit family protein | - |
| HV014_RS08170 () | 1678132..1678677 | - | 546 | WP_000453567.1 | terminase small subunit | - |
| HV014_RS08175 () | 1679015..1679335 | + | 321 | WP_000025003.1 | hypothetical protein | - |
| HV014_RS08180 () | 1679716..1680159 | - | 444 | WP_181199266.1 | lysis protein | - |
| HV014_RS08185 () | 1680156..1680653 | - | 498 | WP_001135259.1 | lysozyme RrrD | - |
| HV014_RS08190 () | 1680653..1680868 | - | 216 | WP_000839582.1 | phage lysis protein EssD | - |
| HV014_RS08195 () | 1681057..1681788 | - | 732 | WP_001146305.1 | helix-turn-helix domain-containing protein | - |
| HV014_RS08200 () | 1682140..1683099 | - | 960 | WP_000592546.1 | DUF523 and DUF1722 domain-containing protein | - |
| HV014_RS08205 () | 1683292..1683816 | + | 525 | WP_000780581.1 | lipocalin family protein | - |
| HV014_RS08210 () | 1683971..1684348 | - | 378 | WP_001204777.1 | antitermination protein | - |
| HV014_RS08215 () | 1684434..1684574 | - | 141 | WP_175118624.1 | YlcG family protein | - |
| HV014_RS08220 () | 1684571..1684933 | - | 363 | WP_175118623.1 | crossover junction endodeoxyribonuclease RusA | - |
| HV014_RS08225 () | 1684930..1685220 | - | 291 | WP_181199267.1 | DUF1364 domain-containing protein | - |
| HV014_RS08230 () | 1685213..1685383 | - | 171 | WP_000224916.1 | hypothetical protein | - |
| HV014_RS08235 () | 1685383..1685838 | - | 456 | WP_181199268.1 | DNA base-flipping protein YbcN | - |
| HV014_RS08240 () | 1685835..1685936 | - | 102 | WP_001309322.1 | hypothetical protein | - |
| HV014_RS08245 () | 1686033..1686284 | - | 252 | WP_001391403.1 | hypothetical protein | - |
| HV014_RS08250 () | 1686778..1687386 | - | 609 | WP_000211451.1 | hypothetical protein | - |
| HV014_RS08255 () | 1688046..1689464 | + | 1419 | WP_042028685.1 | hypothetical protein | - |
| HV014_RS08260 () | 1689516..1689770 | - | 255 | WP_001697053.1 | hypothetical protein | - |
| HV014_RS08265 () | 1689835..1690122 | - | 288 | WP_001697051.1 | ren protein from phage origin | - |
| HV014_RS08270 () | 1690119..1690820 | - | 702 | WP_016239473.1 | replication protein P | - |
| HV014_RS08275 () | 1690817..1691836 | - | 1020 | WP_181199269.1 | replication protein | - |
| HV014_RS08280 () | 1691833..1692372 | - | 540 | WP_148047522.1 | toxin YdaT domain-containing protein | - |
| HV014_RS08285 () | 1692442..1692672 | - | 231 | WP_001067459.1 | helix-turn-helix domain-containing protein | - |
| HV014_RS08290 () | 1692777..1693466 | + | 690 | WP_000858975.1 | helix-turn-helix transcriptional regulator | - |
| HV014_RS08295 () | 1693589..1694338 | + | 750 | WP_000389051.1 | hypothetical protein | - |
| HV014_RS08300 () | 1694335..1695162 | + | 828 | WP_032176957.1 | DUF3037 domain-containing protein | - |
| HV014_RS08305 () | 1695671..1695877 | + | 207 | WP_000233576.1 | phage encoded cell division inhibitor protein | - |
| HV014_RS08310 () | 1695953..1696249 | + | 297 | WP_181199270.1 | host-nuclease inhibitor protein Gam | - |
| HV014_RS08315 () | 1696255..1697040 | + | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| HV014_RS08320 () | 1697037..1697717 | + | 681 | WP_000186812.1 | YqaJ viral recombinase family protein | - |
| HV014_RS08325 () | 1697714..1697875 | + | 162 | WP_181199271.1 | DUF1317 family protein | - |
| HV014_RS08330 () | 1697868..1698425 | + | 558 | WP_032255841.1 | phage N-6-adenine-methyltransferase | - |
| HV014_RS08335 () | 1698502..1698717 | + | 216 | WP_046076942.1 | hypothetical protein | - |
| HV014_RS08340 () | 1698816..1699034 | + | 219 | WP_000763385.1 | TraR/DksA family transcriptional regulator | - |
| HV014_RS08345 () | 1699082..1699360 | + | 279 | WP_000488407.1 | DUF4222 domain-containing protein | - |
| HV014_RS08350 () | 1699429..1699761 | + | 333 | Protein_1636 | helix-turn-helix domain-containing protein | - |
| HV014_RS08355 () | 1699653..1700813 | + | 1161 | WP_000023575.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HV014_RS08365 () | 1701018..1702271 | - | 1254 | WP_181199272.1 | glutamate-5-semialdehyde dehydrogenase | - |
| HV014_RS08370 () | 1702283..1703386 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| HV014_RS08375 () | 1703674..1704729 | + | 1056 | WP_000749856.1 | phosphoporin PhoE | - |
| HV014_RS08380 () | 1704768..1705169 | - | 402 | WP_000174676.1 | sigma factor-binding protein Crl | - |
| HV014_RS08385 () | 1705227..1706471 | - | 1245 | WP_181199273.1 | esterase FrsA | - |
| - () | 1705887..1705967 | - | 81 | NuclAT_9 | - | - |
| - () | 1705887..1705967 | - | 81 | NuclAT_9 | - | - |
| - () | 1705887..1705967 | - | 81 | NuclAT_9 | - | - |
| - () | 1705887..1705967 | - | 81 | NuclAT_9 | - | - |
| HV014_RS08390 () | 1706564..1707022 | - | 459 | WP_001291987.1 | xanthine phosphoribosyltransferase | - |
| HV014_RS08395 () | 1707283..1708740 | + | 1458 | WP_181199274.1 | cytosol nonspecific dipeptidase | - |
| HV014_RS08400 () | 1708749..1709030 | + | 282 | WP_000106440.1 | hypothetical protein | - |
| HV014_RS08405 () | 1709039..1709563 | - | 525 | WP_141095971.1 | metal-dependent hydrolase | - |
| HV014_RS08410 () | 1709625..1710239 | - | 615 | Protein_1647 | peptide chain release factor H | - |
| HV014_RS08415 () | 1710236..1711375 | - | 1140 | WP_181199275.1 | RNA ligase RtcB family protein | - |
| HV014_RS08420 () | 1711693..1712145 | - | 453 | WP_181199276.1 | GNAT family N-acetyltransferase | - |
| HV014_RS08425 () | 1712155..1712553 | - | 399 | WP_181199277.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| HV014_RS08430 () | 1712556..1712849 | - | 294 | WP_181199278.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HV014_RS08435 () | 1712901..1713956 | - | 1056 | WP_181199279.1 | DNA polymerase IV | - |
| HV014_RS08440 () | 1714027..1714813 | - | 787 | Protein_1653 | Chemotaxis protein LafU | VF |
| HV014_RS08445 () | 1714758..1716497 | + | 1740 | WP_181199280.1 | Flagellar biosynthesis protein FlhA | VF |
| HV014_RS08450 () | 1716582..1718402 | - | 1821 | WP_181199281.1 | exodeoxyribonuclease V subunit alpha | - |
| HV014_RS08455 () | 1718399..1721950 | - | 3552 | WP_181199282.1 | exodeoxyribonuclease V subunit beta | - |
| HV014_RS08460 () | 1721943..1724831 | - | 2889 | WP_001138269.1 | pitrilysin | - |
| HV014_RS08465 () | 1725008..1728376 | - | 3369 | WP_000946806.1 | exodeoxyribonuclease V subunit gamma | - |
| HV014_RS08470 () | 1728392..1728712 | - | 321 | WP_001164797.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| HV014_RS08475 () | 1728697..1729101 | - | 405 | WP_046083260.1 | DUF2509 family protein | - |
| HV014_RS08480 () | 1729098..1729661 | - | 564 | WP_176912997.1 | prepilin peptidase-dependent protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|