MGE detailed information
MGE type: Genomic_island MGE length: 36537 bp
Accession: NZ_CP055418 Location: 4342105..4378641 Organism: Citrobacter sp. RHBSTW-00944 Replicon: chromosome
Accession: NZ_CP055418 Location: 4342105..4378641 Organism: Citrobacter sp. RHBSTW-00944 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV334_RS21010 () | 4337849..4338064 | + | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| HV334_RS21015 () | 4338305..4340050 | + | 1746 | WP_019077713.1 | DNA primase | - |
| HV334_RS21020 () | 4340215..4342059 | + | 1845 | WP_016154549.1 | RNA polymerase sigma factor RpoD | - |
| HV334_RS21025 () | 4342105..4342611 | - | 507 | WP_103767095.1 | G/U mismatch-specific DNA glycosylase | - |
| HV334_RS21035 () | 4342974..4343315 | - | 342 | WP_181220861.1 | TA system toxin CbtA family protein | Toxin Detail |
| HV334_RS21040 () | 4343336..4343653 | - | 318 | WP_006812013.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HV334_RS21045 () | 4343673..4343894 | - | 222 | WP_001548171.1 | DUF987 domain-containing protein | - |
| HV334_RS21050 () | 4343903..4344379 | - | 477 | WP_000811693.1 | RadC family protein | - |
| HV334_RS21055 () | 4344395..4344853 | - | 459 | WP_001548150.1 | antirestriction protein | - |
| HV334_RS21060 () | 4344951..4345190 | - | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| HV334_RS21065 () | 4345267..4345734 | - | 468 | WP_001547765.1 | hypothetical protein | - |
| HV334_RS21070 () | 4345757..4346200 | - | 444 | WP_181220862.1 | hypothetical protein | - |
| HV334_RS21075 () | 4346200..4346436 | - | 237 | WP_001144031.1 | hypothetical protein | - |
| HV334_RS21080 () | 4346477..4347178 | - | 702 | WP_181220863.1 | WYL domain-containing protein | - |
| HV334_RS21085 () | 4347395..4348084 | - | 690 | Protein_4124 | DUF945 domain-containing protein | - |
| HV334_RS21090 () | 4348666..4350375 | + | 1710 | WP_001618784.1 | group II intron reverse transcriptase/maturase | - |
| HV334_RS21095 () | 4350448..4350579 | - | 132 | Protein_4126 | DUF945 domain-containing protein | - |
| HV334_RS21100 () | 4350671..4351534 | - | 864 | WP_016154552.1 | GTPase family protein | - |
| HV334_RS21105 () | 4351966..4352660 | + | 695 | Protein_4128 | IS5 family transposase ISThi1 | Transposase |
| HV334_RS21110 () | 4352656..4353225 | + | 570 | Protein_4129 | IS5 family transposase ISThi1 | Transposase |
| HV334_RS21115 () | 4353450..4354601 | - | 1152 | WP_000323729.1 | hypothetical protein | VF |
| HV334_RS21120 () | 4354626..4355595 | - | 970 | Protein_4131 | M48 family metalloprotease | - |
| HV334_RS21125 () | 4355573..4356070 | - | 498 | WP_016154556.1 | heat resistance protein PsiE-GI | - |
| HV334_RS21130 () | 4356067..4357782 | - | 1716 | WP_039185889.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| HV334_RS21135 () | 4357786..4358226 | - | 441 | WP_000786816.1 | heat resistance system thioredoxin Trx-GI | - |
| HV334_RS21140 () | 4358216..4359361 | - | 1146 | WP_045282331.1 | hypothetical protein | - |
| HV334_RS21145 () | 4359441..4360052 | - | 612 | WP_001090779.1 | heat resistance membrane protein HdeD-GI | - |
| HV334_RS21150 () | 4360142..4361029 | - | 888 | WP_004118195.1 | heat resistance protein YfdX2 | - |
| HV334_RS21155 () | 4361132..4362046 | - | 915 | WP_181220864.1 | heat resistance protein YfdX1 | - |
| HV334_RS21160 () | 4362069..4362528 | - | 460 | Protein_4139 | small heat shock protein sHSP20-GI | - |
| HV334_RS21165 () | 4362616..4362759 | - | 144 | WP_181221950.1 | hypothetical protein | - |
| HV334_RS21170 () | 4362756..4365605 | - | 2850 | WP_016154561.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | VF |
| HV334_RS21175 () | 4365711..4366280 | - | 570 | WP_000350435.1 | Small heat shock protein IbpA | VF |
| HV334_RS21180 () | 4366315..4366596 | - | 282 | WP_000643630.1 | helix-turn-helix domain-containing protein | - |
| HV334_RS21185 () | 4366825..4367088 | - | 264 | WP_001295708.1 | hypothetical protein | - |
| HV334_RS21190 () | 4367103..4367366 | + | 264 | WP_001247776.1 | IS66 family transposase ISPpu19 | Transposase |
| HV334_RS21195 () | 4367311..4367475 | + | 165 | Protein_4146 | transposase domain-containing protein | - |
| HV334_RS21200 () | 4367664..4367906 | + | 243 | Protein_4147 | IS3 family transposase ISEhe3 | Transposase |
| HV334_RS21205 () | 4368137..4369477 | + | 1341 | WP_008786676.1 | IS110 family transposase ISWpi13 | Transposase |
| HV334_RS21210 () | 4369485..4370399 | + | 915 | Protein_4149 | IS3 family transposase ISEhe3 | Transposase |
| HV334_RS21215 () | 4370602..4371582 | + | 981 | WP_181220865.1 | IS5 family transposase ISKpn26 | Transposase |
| HV334_RS21220 () | 4371706..4374858 | + | 3153 | WP_181220866.1 | type I restriction endonuclease subunit R | - |
| HV334_RS21225 () | 4374893..4375387 | + | 495 | WP_006809979.1 | hypothetical protein | - |
| HV334_RS21230 () | 4375536..4376233 | - | 698 | Protein_4153 | IS1 family transposase IS1R | Transposase |
| HV334_RS21235 () | 4376634..4377116 | + | 483 | WP_047499203.1 | hypothetical protein | VF |
| HV334_RS21240 () | 4377113..4377592 | + | 480 | WP_047499201.1 | DUF2778 domain-containing protein | - |
| HV334_RS21245 () | 4377592..4377858 | + | 267 | WP_047499199.1 | hypothetical protein | - |
| HV334_RS21250 () | 4378342..4378665 | - | 324 | WP_071524484.1 | DUF1889 family protein | - |
| HV334_RS21255 () | 4378779..4380590 | - | 1812 | WP_181220867.1 | diol dehydratase reactivase subunit alpha | - |
| HV334_RS21260 () | 4380601..4381029 | - | 429 | WP_016154578.1 | diol dehydratase small subunit | - |
| HV334_RS21265 () | 4381032..4381616 | - | 585 | WP_016154579.1 | propanediol/glycerol family dehydratase medium subunit | - |
| HV334_RS21270 () | 4381628..4383295 | - | 1668 | WP_016154580.1 | propanediol/glycerol family dehydratase large subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|