MGE detailed information
MGE type: Prophage MGE length: 45671 bp
Accession: NZ_CP055302 Location: 1550059..1595729 Organism: Mannheimia pernigra strain 16CN0041 Replicon: chromosome
Accession: NZ_CP055302 Location: 1550059..1595729 Organism: Mannheimia pernigra strain 16CN0041 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV561_RS07870 () | 1545762..1546844 | - | 1083 | WP_176808443.1 | 3-phosphoserine/phosphohydroxythreonine transaminase | - |
| HV561_RS07875 () | 1547015..1548091 | - | 1077 | WP_176808444.1 | porin | - |
| HV561_RS07880 () | 1548586..1549104 | + | 519 | WP_176808445.1 | primosomal replication protein | - |
| HV561_RS07885 () | 1549148..1550035 | - | 888 | WP_176808446.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| HV561_RS07890 () | 1550059..1550238 | - | 180 | WP_176808447.1 | carbon storage regulator CsrA | - |
| HV561_RS07895 () | 1550316..1552940 | - | 2625 | WP_176808448.1 | alanine--tRNA ligase | - |
| HV561_RS07900 () | 1553134..1553559 | - | 426 | WP_176808449.1 | universal stress protein | - |
| HV561_RS07905 () | 1553798..1554571 | + | 774 | WP_159630157.1 | FNR family transcription factor | - |
| HV561_RS07910 () | 1554711..1555502 | + | 792 | WP_159630155.1 | hypothetical protein | VF |
| HV561_RS07915 () | 1555602..1557578 | + | 1977 | WP_176808450.1 | exoribonuclease II | - |
| HV561_RS07920 () | 1557651..1558463 | + | 813 | WP_176808451.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | - |
| HV561_RS07930 () | 1558828..1559826 | + | 999 | WP_176808452.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HV561_RS07935 () | 1560104..1560286 | + | 183 | WP_176808453.1 | ribbon-helix-helix protein, CopG family | - |
| HV561_RS07940 () | 1560566..1560751 | + | 186 | WP_159630147.1 | ribbon-helix-helix protein, CopG family | - |
| HV561_RS07945 () | 1560769..1561062 | - | 294 | WP_176808454.1 | hypothetical protein | - |
| HV561_RS07950 () | 1561062..1561358 | - | 297 | WP_202880428.1 | hypothetical protein | - |
| HV561_RS07955 () | 1561306..1561608 | - | 303 | WP_176808456.1 | hypothetical protein | - |
| HV561_RS07960 () | 1561653..1562105 | - | 453 | WP_176808457.1 | single-stranded DNA-binding protein | - |
| HV561_RS07965 () | 1562293..1564704 | - | 2412 | WP_176808458.1 | replication endonuclease | - |
| HV561_RS07970 () | 1564701..1565033 | - | 333 | WP_176808459.1 | hypothetical protein | - |
| HV561_RS07975 () | 1565017..1565271 | - | 255 | WP_176808460.1 | hypothetical protein | - |
| HV561_RS07980 () | 1565332..1565625 | - | 294 | WP_159630132.1 | hypothetical protein | - |
| HV561_RS07985 () | 1565635..1565964 | - | 330 | WP_176808461.1 | hypothetical protein | - |
| HV561_RS07990 () | 1566047..1566319 | - | 273 | WP_159630130.1 | hypothetical protein | - |
| HV561_RS07995 () | 1566456..1566857 | + | 402 | WP_176808462.1 | hypothetical protein | - |
| HV561_RS08000 () | 1567078..1567317 | + | 240 | WP_176808463.1 | hypothetical protein | - |
| HV561_RS08005 () | 1567474..1568019 | - | 546 | WP_176808464.1 | hypothetical protein | - |
| HV561_RS08010 () | 1568044..1568238 | - | 195 | WP_176808465.1 | hypothetical protein | - |
| HV561_RS08015 () | 1568424..1568825 | + | 402 | WP_176808466.1 | helix-turn-helix domain-containing protein | - |
| HV561_RS08020 () | 1568859..1569212 | + | 354 | WP_176808467.1 | hypothetical protein | - |
| HV561_RS08025 () | 1569264..1570403 | + | 1140 | WP_176808468.1 | hypothetical protein | - |
| HV561_RS08030 () | 1570406..1570732 | + | 327 | WP_176808469.1 | STAS-like domain-containing protein | - |
| HV561_RS08035 () | 1570736..1571140 | + | 405 | WP_176808470.1 | hypothetical protein | - |
| HV561_RS08040 () | 1571144..1572382 | - | 1239 | WP_176808471.1 | phage late control D family protein | - |
| HV561_RS08045 () | 1572382..1572819 | - | 438 | WP_176808472.1 | phage tail protein | - |
| HV561_RS08050 () | 1572884..1573000 | - | 117 | WP_176809023.1 | GpE family phage tail protein | - |
| HV561_RS08055 () | 1573024..1573335 | - | 312 | WP_176808473.1 | phage tail assembly protein | - |
| HV561_RS08060 () | 1573401..1573907 | - | 507 | WP_176808474.1 | phage major tail tube protein | - |
| HV561_RS08065 () | 1573917..1575098 | - | 1182 | WP_176808475.1 | phage tail sheath protein | - |
| HV561_RS08070 () | 1575206..1575478 | - | 273 | WP_176808476.1 | hypothetical protein | - |
| HV561_RS08075 () | 1575462..1576094 | - | 633 | WP_176809024.1 | DUF4376 domain-containing protein | - |
| HV561_RS08080 () | 1576094..1578466 | - | 2373 | WP_176808477.1 | phage tail protein | - |
| HV561_RS08085 () | 1578468..1579010 | - | 543 | WP_176808478.1 | phage tail protein I | - |
| HV561_RS08090 () | 1579000..1579917 | - | 918 | WP_176808479.1 | baseplate J/gp47 family protein | - |
| HV561_RS08095 () | 1579914..1580249 | - | 336 | WP_176808480.1 | GPW/gp25 family protein | - |
| HV561_RS08100 () | 1580249..1580818 | - | 570 | WP_176808481.1 | phage baseplate assembly protein V | - |
| HV561_RS08105 () | 1580945..1581232 | - | 288 | WP_176808482.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HV561_RS08110 () | 1581225..1581404 | - | 180 | WP_176808483.1 | hypothetical protein | - |
| HV561_RS08115 () | 1581544..1581975 | - | 432 | WP_176808484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| HV561_RS08120 () | 1582036..1582209 | - | 174 | WP_176808485.1 | mRNA interferase | - |
| HV561_RS08125 () | 1582379..1582792 | - | 414 | WP_176808486.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HV561_RS08130 () | 1582815..1582973 | - | 159 | WP_176809025.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HV561_RS08135 () | 1583143..1586121 | - | 2979 | WP_176808487.1 | phage tail tape measure protein | - |
| HV561_RS08140 () | 1586158..1586409 | + | 252 | WP_176808488.1 | hypothetical protein | - |
| HV561_RS08145 () | 1586524..1586802 | + | 279 | WP_176808489.1 | hypothetical protein | - |
| HV561_RS08150 () | 1586830..1587294 | - | 465 | WP_176808490.1 | phage virion morphogenesis protein | - |
| HV561_RS08155 () | 1587287..1587772 | - | 486 | WP_176808491.1 | phage tail protein | - |
| HV561_RS08160 () | 1587769..1587990 | - | 222 | WP_176808492.1 | TraR/DksA family transcriptional regulator | - |
| HV561_RS08165 () | 1588139..1588594 | - | 456 | WP_176808493.1 | hypothetical protein | - |
| HV561_RS08170 () | 1588596..1589123 | - | 528 | WP_176808494.1 | lysozyme | - |
| HV561_RS08175 () | 1589123..1589326 | - | 204 | WP_176808495.1 | holin | - |
| HV561_RS08180 () | 1589348..1589560 | - | 213 | WP_176808496.1 | tail protein X | - |
| HV561_RS08185 () | 1589560..1590075 | - | 516 | WP_176808497.1 | head completion/stabilization protein | - |
| HV561_RS08190 () | 1590185..1590844 | - | 660 | WP_176808498.1 | terminase endonuclease subunit | - |
| HV561_RS08195 () | 1590846..1591904 | - | 1059 | WP_176808499.1 | phage major capsid protein, P2 family | - |
| HV561_RS08200 () | 1591915..1592724 | - | 810 | WP_176808500.1 | GPO family capsid scaffolding protein | - |
| HV561_RS08205 () | 1592878..1594680 | + | 1803 | WP_176809026.1 | terminase ATPase subunit family protein | - |
| HV561_RS08210 () | 1594689..1595729 | + | 1041 | WP_176808501.1 | phage portal protein | - |
| HV561_RS08215 () | 1596420..1597016 | - | 597 | WP_159630058.1 | DedA family protein | - |
| HV561_RS08220 () | 1597018..1598034 | - | 1017 | WP_176808502.1 | HTH-type transcriptional repressor PurR | - |
| HV561_RS08225 () | 1598159..1598887 | - | 729 | WP_176808503.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| HV561_RS08230 () | 1598892..1599674 | - | 783 | WP_176808504.1 | alpha/beta fold hydrolase | - |
| HV561_RS08235 () | 1599792..1600361 | + | 570 | WP_176808505.1 | replication initiation negative regulator SeqA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|