MGE detailed information
MGE type: Genomic_island MGE length: 14938 bp
Accession: NZ_CP055292 Location: 1361614..1376551 Organism: Shigella sonnei strain SE6-1 Replicon: chromosome
Accession: NZ_CP055292 Location: 1361614..1376551 Organism: Shigella sonnei strain SE6-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUX90_RS06460 () | 1356933..1357835 | - | 903 | WP_000832227.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| HUX90_RS06465 () | 1357855..1358358 | - | 504 | WP_000870595.1 | type 1 fimbria minor subunit FimG | - |
| HUX90_RS06470 () | 1358371..1358901 | - | 531 | WP_001244818.1 | type 1 fimbria minor subunit FimF | - |
| HUX90_RS06475 () | 1358911..1361547 | - | 2637 | WP_000120967.1 | fimbrial usher FimD | - |
| HUX90_RS06480 () | 1361614..1362339 | - | 726 | WP_000066557.1 | hypothetical protein | VF |
| HUX90_RS06485 () | 1362376..1362915 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| HUX90_RS06490 () | 1362980..1363528 | - | 549 | WP_000695561.1 | hypothetical protein | VF |
| HUX90_RS06495 () | 1364009..1364605 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| HUX90_RS06500 () | 1365083..1365685 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| HUX90_RS06505 () | 1367141..1367857 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HUX90_RS06510 () | 1367877..1368983 | + | 1107 | WP_001298927.1 | N-acetylneuraminate epimerase | - |
| HUX90_RS06515 () | 1369048..1370028 | + | 981 | WP_000991446.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HUX90_RS06520 () | 1370036..1370686 | - | 651 | WP_001037963.1 | HNH endonuclease | - |
| HUX90_RS06525 () | 1371288..1372235 | - | 948 | WP_176527851.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| HUX90_RS06530 () | 1372228..1372623 | - | 396 | WP_000152739.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| HUX90_RS06535 () | 1372693..1373526 | - | 834 | WP_001192741.1 | DUF4942 domain-containing protein | - |
| HUX90_RS06540 () | 1373832..1375388 | + | 1557 | WP_000202816.1 | type I restriction-modification system subunit M | - |
| HUX90_RS06545 () | 1375385..1376551 | + | 1167 | WP_001293040.1 | restriction endonuclease subunit S | - |
| HUX90_RS06550 () | 1376673..1379789 | + | 3117 | WP_176527852.1 | HsdR family type I site-specific deoxyribonuclease | - |
| HUX90_RS06560 () | 1380294..1381313 | + | 1020 | WP_001406584.1 | NADPH-dependent aldehyde reductase Ahr | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|