MGE detailed information
MGE type: Conjugative plasmid MGE length: 84033 bp
Accession: NZ_CP055261 Location: 1..84033 Organism: Escherichia coli strain AH62 Replicon: plasmid pAH62-2
Accession: NZ_CP055261 Location: 1..84033 Organism: Escherichia coli strain AH62 Replicon: plasmid pAH62-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HU676_RS23355 () | 46..1077 | + | 1032 | WP_000907852.1 | replication initiation protein | - |
| HU676_RS23360 () | 1981..2265 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| HU676_RS23365 () | 2265..2540 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HU676_RS23370 () | 2646..2927 | + | 282 | WP_001105066.1 | hypothetical protein | - |
| HU676_RS23375 () | 3119..3385 | - | 267 | WP_000627832.1 | hypothetical protein | - |
| HU676_RS23380 () | 3385..3879 | - | 495 | WP_015058884.1 | hypothetical protein | - |
| HU676_RS23385 () | 3935..4537 | - | 603 | WP_000521606.1 | hypothetical protein | - |
| HU676_RS23390 () | 4713..5765 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| HU676_RS23395 () | 5978..6568 | - | 591 | WP_001401589.1 | hypothetical protein | - |
| HU676_RS23400 () | 6568..6822 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| HU676_RS23405 () | 7391..7804 | + | 414 | WP_071447699.1 | hypothetical protein | - |
| HU676_RS23410 () | 7806..8585 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| HU676_RS23415 () | 8765..9409 | + | 645 | WP_001144036.1 | ParA family protein | - |
| HU676_RS23420 () | 9496..9804 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| HU676_RS23425 () | 10218..11198 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| HU676_RS23430 () | 11191..11607 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| HU676_RS23435 () | 11609..12883 | - | 1275 | WP_015058887.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HU676_RS23440 () | 12883..13320 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HU676_RS23445 () | 13317..13565 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| HU676_RS23450 () | 13983..14885 | + | 903 | WP_001442863.1 | DUF1281 domain-containing protein | - |
| HU676_RS23455 () | 14889..15194 | + | 306 | WP_015058890.1 | hypothetical protein | - |
| HU676_RS23460 () | 15270..15953 | + | 684 | WP_021513974.1 | DNA methylase | - |
| HU676_RS23465 () | 15954..16175 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| HU676_RS23470 () | 16188..16622 | + | 435 | WP_000274472.1 | DUF1380 family protein | - |
| HU676_RS23475 () | 16673..17443 | + | 771 | WP_001434682.1 | hypothetical protein | - |
| HU676_RS23480 () | 17983..18285 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| HU676_RS23485 () | 18332..18754 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| HU676_RS23490 () | 18751..18942 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| HU676_RS23495 () | 19713..20240 | + | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| HU676_RS23500 () | 20298..20531 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| HU676_RS23505 () | 20590..22548 | + | 1959 | WP_001145471.1 | ParB/RepB/Spo0J family partition protein | - |
| HU676_RS23510 () | 22603..23037 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| HU676_RS23515 () | 23034..23753 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| HU676_RS23520 () | 23750..24346 | + | 597 | WP_000978005.1 | hypothetical protein | - |
| HU676_RS23525 () | 24809..25309 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| HU676_RS23530 () | 26038..26472 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| HU676_RS23535 () | 26565..26831 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| HU676_RS23540 () | 26896..27786 | + | 891 | WP_000038399.1 | Recombination-promoting nuclease RpnA | VF |
| HU676_RS23545 () | 27849..28043 | + | 195 | WP_001496986.1 | hypothetical protein | - |
| HU676_RS23550 () | 28074..28325 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| HU676_RS23555 () | 28359..28556 | - | 198 | WP_176256656.1 | hypothetical protein | - |
| HU676_RS23560 () | 28905..29753 | + | 849 | WP_021513954.1 | DUF4942 domain-containing protein | - |
| HU676_RS23565 () | 29839..30174 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HU676_RS23570 () | 30408..30740 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| HU676_RS23575 () | 30751..33450 | + | 2700 | WP_071447698.1 | Protein TraI | Relaxase |
| HU676_RS23580 () | 33487..35778 | - | 2292 | WP_001289275.1 | hypothetical protein | - |
| HU676_RS23585 () | 35771..36841 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| HU676_RS23590 () | 36860..38068 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| HU676_RS23595 () | 38286..39272 | - | 987 | WP_001257838.1 | hypothetical protein | - |
| - () | 39433..39490 | - | 58 | NuclAT_0 | - | - |
| - () | 39433..39490 | - | 58 | NuclAT_0 | - | - |
| - () | 39433..39490 | - | 58 | NuclAT_0 | - | - |
| - () | 39433..39490 | - | 58 | NuclAT_0 | - | - |
| HU676_RS23600 () | 39545..39697 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| HU676_RS23605 () | 39769..40020 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| HU676_RS23610 () | 40679..40855 | - | 177 | WP_001054901.1 | hypothetical protein | - |
| HU676_RS23615 () | 41187..41396 | + | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| HU676_RS23620 () | 41468..42130 | - | 663 | WP_060527638.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HU676_RS23625 () | 42201..44369 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| HU676_RS23630 () | 44466..45050 | - | 585 | WP_060527640.1 | IncI1-type conjugal transfer protein TraX | - |
| HU676_RS23635 () | 45079..46281 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| HU676_RS23640 () | 46248..46862 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| HU676_RS23645 () | 46862..49906 | - | 3045 | WP_071447696.1 | IncI1-type conjugal transfer protein TraU | - |
| HU676_RS23650 () | 49996..50796 | - | 801 | WP_060527642.1 | IncI1-type conjugal transfer protein TraT | - |
| HU676_RS23655 () | 50780..50968 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| HU676_RS23660 () | 51032..51436 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| HU676_RS23665 () | 51487..52014 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| HU676_RS23670 () | 52014..52718 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| HU676_RS23675 () | 52718..54007 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| HU676_RS23680 () | 54010..54993 | - | 984 | WP_021513963.1 | hypothetical protein | VF |
| HU676_RS23685 () | 55004..55696 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| HU676_RS23690 () | 55693..56040 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HU676_RS23695 () | 56058..59825 | - | 3768 | WP_021513964.1 | hypothetical protein | - |
| HU676_RS23700 () | 59915..60466 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| HU676_RS23705 () | 60481..60771 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| HU676_RS23710 () | 60768..61916 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| HU676_RS23715 () | 61913..62731 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| HU676_RS23720 () | 62728..63186 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| HU676_RS23725 () | 63581..64165 | - | 585 | WP_000977525.1 | histidine phosphatase family protein | - |
| HU676_RS23730 () | 64225..65427 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| HU676_RS23735 () | 65513..66337 | - | 825 | WP_015058912.1 | conjugal transfer protein TraE | - |
| HU676_RS23740 () | 66488..67642 | - | 1155 | WP_001139955.1 | integrase | - |
| HU676_RS23745 () | 68747..70117 | - | 1371 | WP_094324268.1 | hypothetical protein | VF |
| HU676_RS23750 () | 70117..70773 | - | 657 | WP_001193551.1 | hypothetical protein | VF |
| HU676_RS23755 () | 70758..71318 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| HU676_RS23760 () | 71328..71942 | - | 615 | WP_000908228.1 | hypothetical protein | VF |
| HU676_RS23765 () | 71959..73044 | - | 1086 | WP_001208803.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HU676_RS23770 () | 73057..74610 | - | 1554 | WP_000362204.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HU676_RS23775 () | 74621..75073 | - | 453 | WP_001247333.1 | hypothetical protein | VF |
| HU676_RS23780 () | 75060..76355 | - | 1296 | WP_000752776.1 | type 4b pilus protein PilO2 | - |
| HU676_RS23785 () | 76348..78030 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| HU676_RS23790 () | 78044..78481 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| HU676_RS23795 () | 78481..79548 | - | 1068 | WP_021513968.1 | hypothetical protein | VF |
| HU676_RS23800 () | 80300..80554 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| HU676_RS23805 () | 80726..81409 | - | 684 | WP_000213863.1 | hypothetical protein | - |
| HU676_RS23810 () | 81663..82196 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| HU676_RS23815 () | 82638..82925 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| HU676_RS23820 () | 82843..83106 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|