MGE detailed information
MGE type: Genomic_island MGE length: 56715 bp
Accession: NZ_CP055256 Location: 820346..877060 Organism: Escherichia coli strain AH25 Replicon: chromosome
Accession: NZ_CP055256 Location: 820346..877060 Organism: Escherichia coli strain AH25 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUU84_RS03960 () | 815711..816274 | + | 564 | WP_001115137.1 | type II secretion system minor pseudopilin GspH | - |
| HUU84_RS03965 () | 816271..816642 | + | 372 | WP_000820098.1 | type II secretion system minor pseudopilin GspI | - |
| HUU84_RS03970 () | 816639..817238 | + | 600 | WP_001255040.1 | type II secretion system minor pseudopilin GspJ | - |
| HUU84_RS03975 () | 817241..818218 | + | 978 | WP_000633222.1 | type II secretion system minor pseudopilin GspK | - |
| HUU84_RS03980 () | 818215..819393 | + | 1179 | WP_000094974.1 | type II secretion system protein GspL | - |
| HUU84_RS03985 () | 819395..819931 | + | 537 | WP_000942786.1 | GspM family type II secretion system protein YghD | - |
| HUU84_RS03990 () | 820346..820672 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HUU84_RS03995 () | 820669..820932 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HUU84_RS04000 () | 821004..821870 | - | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| HUU84_RS04005 () | 821955..822152 | - | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| HUU84_RS04010 () | 822164..822655 | - | 492 | WP_023155722.1 | hypothetical protein | - |
| HUU84_RS04015 () | 822652..823029 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| HUU84_RS04020 () | 823076..823450 | - | 375 | WP_032153712.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| HUU84_RS04025 () | 823530..823751 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| HUU84_RS04030 () | 823820..824296 | - | 477 | WP_001186715.1 | RadC family protein | - |
| HUU84_RS04035 () | 824312..824797 | - | 486 | WP_032153711.1 | antirestriction protein | - |
| HUU84_RS04040 () | 824889..825707 | - | 819 | WP_001234693.1 | DUF945 domain-containing protein | - |
| HUU84_RS04045 () | 825798..826007 | - | 210 | WP_023155727.1 | DUF905 family protein | - |
| HUU84_RS04050 () | 826037..826714 | - | 678 | WP_023155728.1 | hypothetical protein | - |
| HUU84_RS04055 () | 826833..827717 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| HUU84_RS04060 () | 827824..828756 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| HUU84_RS04065 () | 828753..829562 | - | 810 | WP_032153709.1 | hypothetical protein | - |
| HUU84_RS04070 () | 831313..832044 | + | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| HUU84_RS04075 () | 832138..832795 | - | 658 | Protein_800 | transposase | - |
| HUU84_RS04080 () | 833229..834833 | + | 1605 | WP_001067608.1 | DUF3987 domain-containing protein | - |
| HUU84_RS04085 () | 836430..836996 | + | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| HUU84_RS04090 () | 837116..837265 | - | 150 | WP_001421645.1 | hypothetical protein | - |
| HUU84_RS04095 () | 837280..837852 | + | 573 | WP_032153703.1 | hypothetical protein | - |
| HUU84_RS04100 () | 837921..838157 | + | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| HUU84_RS04105 () | 838426..838974 | + | 549 | WP_032153702.1 | hypothetical protein | - |
| HUU84_RS04110 () | 838993..839241 | - | 249 | WP_001349534.1 | osmoprotectant transport activator ProQ | - |
| HUU84_RS04115 () | 839310..839501 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| HUU84_RS04120 () | 839904..840595 | - | 692 | Protein_809 | IS1 family transposase | - |
| HUU84_RS04125 () | 840655..840831 | + | 177 | Protein_810 | transketolase family protein | - |
| HUU84_RS04130 () | 841094..841207 | + | 114 | WP_131501864.1 | transposase | - |
| HUU84_RS04135 () | 842058..842624 | + | 567 | WP_000919994.1 | hypothetical protein | - |
| HUU84_RS04140 () | 842865..843680 | + | 816 | WP_001043260.1 | 6-phospho-beta-glucosidase BglA | ARG |
| HUU84_RS04145 () | 843741..844544 | + | 804 | WP_001082319.1 | HTH-type transcriptional regulator GlvR | ARG |
| HUU84_RS04150 () | 844544..845380 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| HUU84_RS04155 () | 845686..845928 | + | 243 | WP_000844627.1 | transposase | - |
| HUU84_RS04160 () | 845960..846610 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HUU84_RS04165 () | 846716..847915 | + | 1200 | WP_032153701.1 | FAD assembly factor SdhE | ARG |
| HUU84_RS04170 () | 847882..848070 | - | 189 | Protein_819 | IS91 family transposase | - |
| HUU84_RS04175 () | 848182..848487 | - | 306 | WP_001255015.1 | Flavodoxin 2 | VF |
| HUU84_RS04180 () | 848515..849729 | - | 1215 | WP_023300759.1 | Tyrosine recombinase XerD | ARG |
| HUU84_RS04185 () | 849946..850830 | - | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| HUU84_RS04190 () | 850861..851517 | - | 657 | Protein_823 | IS91-like element ISVsa3 family transposase | - |
| HUU84_RS04195 () | 851451..851717 | - | 267 | WP_021512463.1 | Peptide chain release factor RF2 | VF |
| HUU84_RS04200 () | 852152..852466 | + | 315 | WP_000930062.1 | Lysine--tRNA ligase | VF |
| HUU84_RS04205 () | 852673..852936 | + | 264 | Protein_826 | Isopentenyl-diphosphate Delta-isomerase | VF |
| HUU84_RS04210 () | 853387..854619 | - | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| HUU84_RS04215 () | 854770..855931 | - | 1162 | Protein_828 | IS3 family transposase IS3 | Transposase |
| HUU84_RS04220 () | 856099..857079 | + | 981 | WP_000174035.1 | thymidylate synthase | - |
| HUU84_RS04225 () | 857076..858020 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| HUU84_RS04230 () | 858023..859105 | - | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| HUU84_RS04235 () | 859572..859838 | + | 267 | WP_032153698.1 | MazG-like family protein | - |
| HUU84_RS04240 () | 860138..860652 | - | 515 | Protein_833 | ISL3 family transposase ISEc38 | Transposase |
| HUU84_RS04245 () | 861260..864553 | + | 3294 | Protein_834 | DEAD/DEAH box helicase family protein | - |
| HUU84_RS04250 () | 864604..865308 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUU84_RS04255 () | 865544..865885 | - | 342 | WP_023909256.1 | Arsenic resistance transcriptional regulator ArsR2 | VF |
| HUU84_RS04260 () | 865846..866295 | - | 450 | WP_013362817.1 | hypothetical protein | - |
| HUU84_RS04265 () | 866810..866980 | - | 171 | WP_170852050.1 | rRNA adenine methyltransferase | - |
| HUU84_RS04270 () | 866925..867662 | - | 738 | WP_013362818.1 | Di-/tripeptide transporter | ARG |
| HUU84_RS04275 () | 867788..867883 | - | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| HUU84_RS04280 () | 868018..868722 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUU84_RS04285 () | 868844..869749 | + | 906 | WP_000219391.1 | Multidrug resistance protein MdtO | ARG |
| HUU84_RS04290 () | 869746..870984 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| HUU84_RS04295 () | 870984..871568 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| HUU84_RS04300 () | 872061..872825 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| HUU84_RS04305 () | 872943..873008 | - | 66 | Protein_846 | EAL domain-containing protein | - |
| HUU84_RS04310 () | 873052..873357 | - | 306 | WP_000130000.1 | PadR family transcriptional regulator | - |
| HUU84_RS04315 () | 873514..873765 | - | 252 | Protein_848 | MFS transporter | - |
| HUU84_RS04320 () | 873828..875954 | - | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| HUU84_RS04325 () | 876050..877060 | - | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| HUU84_RS04330 () | 877210..878394 | - | 1185 | WP_176256374.1 | tyrosine-type recombinase/integrase | - |
| HUU84_RS04340 () | 878752..879459 | - | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| HUU84_RS04345 () | 879857..881992 | + | 2136 | WP_000839745.1 | ornithine decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|