MGE detailed information
MGE type: Genomic_island MGE length: 39527 bp
Accession: NZ_CP055256 Location: 4615473..4654999 Organism: Escherichia coli strain AH25 Replicon: chromosome
Accession: NZ_CP055256 Location: 4615473..4654999 Organism: Escherichia coli strain AH25 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUU84_RS22220 () | 4610636..4611523 | - | 888 | WP_072643803.1 | MurR/RpiR family transcriptional regulator | - |
| HUU84_RS22225 () | 4611807..4613183 | + | 1377 | WP_001547043.1 | C4-dicarboxylate transporter DcuC | - |
| HUU84_RS22230 () | 4613271..4614965 | + | 1695 | WP_072643802.1 | NAD-dependent malic enzyme | - |
| HUU84_RS22235 () | 4615082..4615465 | - | 384 | WP_001470106.1 | helix-turn-helix domain-containing protein | - |
| HUU84_RS22240 () | 4615473..4615622 | + | 150 | Protein_4352 | hemolysin/hemagglutinin-like domain protein | - |
| HUU84_RS22245 () | 4616248..4616670 | + | 423 | WP_072643801.1 | hypothetical protein | - |
| HUU84_RS22250 () | 4616792..4617772 | + | 981 | Protein_4354 | IS5 family transposase ISKpn26 | Transposase |
| HUU84_RS22255 () | 4617998..4618195 | - | 198 | WP_001238008.1 | hypothetical protein | - |
| HUU84_RS22260 () | 4618335..4618601 | - | 267 | WP_000766272.1 | YkgJ family cysteine cluster protein | - |
| HUU84_RS22265 () | 4618598..4620169 | - | 1572 | WP_072643800.1 | cobalamin adenosyltransferase | - |
| HUU84_RS22270 () | 4620216..4621295 | - | 1080 | WP_053270652.1 | hypothetical protein | - |
| HUU84_RS22275 () | 4621344..4622240 | - | 897 | WP_072643799.1 | WYL domain-containing protein | - |
| HUU84_RS22280 () | 4622660..4623397 | - | 738 | WP_001389182.1 | porin family protein | - |
| HUU84_RS22285 () | 4623737..4624585 | + | 849 | Protein_4361 | IS3 family transposase ISEc31 | Transposase |
| HUU84_RS22290 () | 4624764..4625387 | - | 624 | WP_032216521.1 | hypothetical protein | - |
| HUU84_RS22295 () | 4625476..4625976 | - | 501 | WP_032216520.1 | hypothetical protein | - |
| HUU84_RS22300 () | 4626244..4626474 | - | 231 | WP_032216528.1 | AlpA family transcriptional regulator | - |
| HUU84_RS22305 () | 4626543..4627103 | - | 561 | WP_077249970.1 | hypothetical protein | - |
| HUU84_RS22310 () | 4627351..4627917 | - | 567 | WP_016238927.1 | inovirus-type Gp2 protein | - |
| HUU84_RS22315 () | 4628951..4629300 | + | 350 | Protein_4367 | transposase | - |
| HUU84_RS22320 () | 4629330..4629458 | - | 129 | Protein_4368 | IS256 family transposase | - |
| HUU84_RS22325 () | 4629727..4630167 | - | 441 | WP_000038139.1 | H-NS histone family protein | - |
| HUU84_RS22330 () | 4630388..4631163 | + | 776 | Protein_4370 | DDE-type integrase/transposase/recombinase | - |
| HUU84_RS22335 () | 4631296..4631870 | - | 575 | Protein_4371 | transposase | - |
| HUU84_RS22340 () | 4631924..4632802 | - | 879 | WP_000769116.1 | restriction endonuclease | - |
| HUU84_RS22345 () | 4633130..4633861 | - | 732 | WP_072643797.1 | inovirus Gp2 family protein | - |
| HUU84_RS22350 () | 4635393..4636523 | - | 1131 | WP_047928958.1 | hypothetical protein | - |
| HUU84_RS22355 () | 4636708..4637592 | + | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| HUU84_RS22360 () | 4637795..4638475 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| HUU84_RS22365 () | 4638623..4639300 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| HUU84_RS22370 () | 4639330..4639539 | + | 210 | WP_032150870.1 | DUF905 family protein | - |
| HUU84_RS22375 () | 4639629..4640447 | + | 819 | WP_001175175.1 | DUF945 domain-containing protein | - |
| HUU84_RS22380 () | 4640539..4641024 | + | 486 | WP_000213722.1 | antirestriction protein | - |
| HUU84_RS22385 () | 4641039..4641515 | + | 477 | WP_001384029.1 | RadC family protein | - |
| HUU84_RS22390 () | 4641602..4641823 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| HUU84_RS22395 () | 4641903..4642271 | + | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HUU84_RS22400 () | 4642361..4642738 | + | 378 | WP_039023548.1 | TA system toxin CbtA family protein | Toxin Detail |
| HUU84_RS22405 () | 4642735..4642884 | + | 150 | Protein_4385 | hypothetical protein | - |
| HUU84_RS22410 () | 4642960..4643157 | + | 198 | WP_088172489.1 | DUF957 domain-containing protein | - |
| HUU84_RS22415 () | 4643242..4644108 | + | 867 | WP_039023551.1 | DUF4942 domain-containing protein | - |
| HUU84_RS22420 () | 4644180..4644443 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HUU84_RS22425 () | 4644440..4644766 | + | 327 | WP_000779482.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HUU84_RS22430 () | 4645649..4647187 | + | 1539 | WP_001187172.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HUU84_RS22435 () | 4647552..4648886 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HUU84_RS22440 () | 4648966..4651113 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| HUU84_RS22445 () | 4651172..4652629 | + | 1458 | WP_000856832.1 | dipeptide/tripeptide permease DtpC | - |
| HUU84_RS22450 () | 4652866..4654383 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| HUU84_RS22455 () | 4654502..4654675 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HUU84_RS22460 () | 4654703..4654999 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HUU84_RS22465 () | 4655226..4655498 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| HUU84_RS22470 () | 4655510..4655740 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| HUU84_RS22475 () | 4655921..4657552 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| HUU84_RS22480 () | 4657549..4658268 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|