MGE detailed information
MGE type: Conjugative plasmid MGE length: 71937 bp
Accession: NZ_CP055254 Location: 1..71937 Organism: Escherichia coli strain AH01 Replicon: plasmid pAH01-3
Accession: NZ_CP055254 Location: 1..71937 Organism: Escherichia coli strain AH01 Replicon: plasmid pAH01-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUU83_RS24240 () | 1..858 | + | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| HUU83_RS24245 () | 1559..1699 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| HUU83_RS24250 () | 1797..2450 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HUU83_RS24255 () | 2543..2800 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HUU83_RS24260 () | 2733..3134 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HUU83_RS24265 () | 3383..3798 | + | 416 | Protein_6 | IS1 family transposase IS1R | Transposase |
| HUU83_RS24270 () | 3834..4379 | - | 546 | Protein_7 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HUU83_RS24275 () | 4445..5149 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUU83_RS24280 () | 5214..5894 | - | 681 | Protein_9 | IS91 family transposase ISAzo26 | Transposase |
| HUU83_RS24285 () | 6166..6870 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUU83_RS24290 () | 6880..7350 | + | 471 | WP_049824851.1 | TetR family transcriptional regulator | - |
| HUU83_RS24295 () | 7370..8158 | + | 789 | WP_014839978.1 | winged helix-turn-helix domain-containing protein | - |
| HUU83_RS24300 () | 8158..8676 | + | 519 | WP_014839979.1 | hypothetical protein | - |
| HUU83_RS24305 () | 8681..9097 | - | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
| HUU83_RS24310 () | 9483..10187 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUU83_RS24315 () | 10237..10980 | + | 744 | Protein_16 | Beta-lactamase TEM | ARG |
| HUU83_RS24320 () | 11239..11715 | + | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| HUU83_RS24325 () | 11762..12637 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| HUU83_RS24330 () | 13059..13763 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUU83_RS24335 () | 13829..13894 | + | 66 | Protein_20 | IS1 family transposase | - |
| HUU83_RS24340 () | 15343..15577 | + | 235 | Protein_21 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HUU83_RS24345 () | 15705..15986 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| HUU83_RS24350 () | 16109..16459 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| HUU83_RS24355 () | 16462..17424 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| HUU83_RS24360 () | 17571..17864 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| HUU83_RS24365 () | 17941..18624 | + | 684 | WP_176285513.1 | DNA methylase | - |
| HUU83_RS24370 () | 18625..18846 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| HUU83_RS24375 () | 18860..19294 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| HUU83_RS24380 () | 19345..20121 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| HUU83_RS24385 () | 20662..20964 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| HUU83_RS24390 () | 21011..21433 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| HUU83_RS24395 () | 21430..21621 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| HUU83_RS24400 () | 22659..22889 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| HUU83_RS24405 () | 22941..24302 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| HUU83_RS24410 () | 24349..24912 | + | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| HUU83_RS24415 () | 24998..25453 | - | 456 | Protein_36 | hypothetical protein | - |
| HUU83_RS24420 () | 25755..26282 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| HUU83_RS24425 () | 26340..26573 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| HUU83_RS24430 () | 26634..28657 | + | 2024 | Protein_39 | ParB/RepB/Spo0J family partition protein | - |
| HUU83_RS24435 () | 28726..29160 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| HUU83_RS24440 () | 29157..29876 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 29888..30112 | + | 225 | NuclAT_0 | - | - |
| - () | 29888..30112 | + | 225 | NuclAT_0 | - | - |
| - () | 29888..30112 | + | 225 | NuclAT_0 | - | - |
| - () | 29888..30112 | + | 225 | NuclAT_0 | - | - |
| HUU83_RS24445 () | 29897..30076 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| HUU83_RS24450 () | 30156..30314 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HUU83_RS24455 () | 30552..30929 | - | 378 | Protein_44 | hypothetical protein | - |
| HUU83_RS24460 () | 31229..31525 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| HUU83_RS24465 () | 31636..32457 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| HUU83_RS24470 () | 32754..33401 | - | 648 | WP_015059008.1 | hypothetical protein | VF |
| HUU83_RS24475 () | 33678..34061 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| HUU83_RS24480 () | 34252..34710 | + | 459 | Protein_49 | PAS domain-containing protein | - |
| HUU83_RS24490 () | 36077..36274 | + | 198 | WP_106686494.1 | traJ domain protein | - |
| HUU83_RS24495 () | 36368..36595 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| HUU83_RS24500 () | 36629..36994 | + | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| HUU83_RS24505 () | 37009..37320 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| HUU83_RS24510 () | 37342..37908 | + | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| HUU83_RS24515 () | 37919..38623 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| HUU83_RS24520 () | 38623..40050 | + | 1428 | WP_032297072.1 | conjugal transfer protein TraB | - |
| HUU83_RS24525 () | 40040..40630 | + | 591 | WP_000002778.1 | conjugal transfer protein TraP | - |
| HUU83_RS24530 () | 40584..40814 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| HUU83_RS24535 () | 40826..41077 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| HUU83_RS24540 () | 41074..41589 | + | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HUU83_RS24545 () | 41724..41945 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| HUU83_RS24550 () | 42105..44732 | + | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| HUU83_RS24555 () | 44729..45115 | + | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| HUU83_RS24560 () | 45112..45744 | + | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| HUU83_RS24565 () | 45741..46733 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| HUU83_RS24570 () | 46760..47068 | + | 309 | WP_000412447.1 | hypothetical protein | - |
| HUU83_RS24575 () | 47131..47652 | + | 522 | WP_015059014.1 | hypothetical protein | - |
| HUU83_RS24580 () | 47679..48317 | + | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HUU83_RS24585 () | 48314..48685 | + | 372 | WP_000056336.1 | hypothetical protein | - |
| HUU83_RS24590 () | 48711..49133 | + | 423 | WP_001229309.1 | HNH endonuclease | - |
| HUU83_RS24595 () | 49130..50980 | + | 1851 | WP_176285514.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HUU83_RS24600 () | 51007..51264 | + | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| HUU83_RS24605 () | 51257..52000 | + | 744 | WP_015059017.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HUU83_RS24610 () | 52116..52397 | + | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HUU83_RS24615 () | 52384..52929 | + | 546 | WP_000059817.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HUU83_RS24620 () | 52859..53233 | + | 375 | WP_071776752.1 | P-type conjugative transfer protein TrbJ | - |
| HUU83_RS24625 () | 53187..53579 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| HUU83_RS24630 () | 53566..54939 | + | 1374 | WP_000944325.1 | conjugal transfer protein TraH | - |
| HUU83_RS24635 () | 54936..57752 | + | 2817 | WP_015059018.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HUU83_RS24640 () | 57785..58306 | + | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| HUU83_RS24645 () | 58331..59062 | + | 732 | WP_021559024.1 | complement resistance protein TraT | - |
| HUU83_RS24650 () | 59265..60002 | + | 738 | WP_015059020.1 | hypothetical protein | - |
| HUU83_RS24655 () | 60053..62278 | + | 2226 | WP_000009363.1 | type IV conjugative transfer system coupling protein TraD | - |
| HUU83_RS24660 () | 62278..67548 | + | 5271 | WP_061093447.1 | Multifunctional conjugation protein TraI | Relaxase |
| HUU83_RS24665 () | 67568..68314 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| HUU83_RS24670 () | 68369..68929 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| HUU83_RS24675 () | 69061..69261 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| HUU83_RS24680 () | 69647..70246 | + | 600 | WP_032083981.1 | hypothetical protein | - |
| HUU83_RS24685 () | 70410..70640 | + | 231 | WP_001736714.1 | hypothetical protein | - |
| - () | 70841..70900 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 70841..70900 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 70841..70900 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 70841..70900 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| HUU83_RS24690 () | 70945..71094 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HUU83_RS24695 () | 71378..71626 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|