MGE detailed information
MGE type: Genomic_island MGE length: 26936 bp
Accession: NZ_CP055247 Location: 3898771..3925706 Organism: Citrobacter freundii strain ZY198 Replicon: chromosome
Accession: NZ_CP055247 Location: 3898771..3925706 Organism: Citrobacter freundii strain ZY198 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTH18_RS18795 () | 3894717..3895721 | + | 1005 | WP_003029591.1 | LacI family DNA-binding transcriptional regulator | - |
| GTH18_RS18800 () | 3895857..3895990 | - | 134 | Protein_3684 | transposase | - |
| GTH18_RS18805 () | 3896155..3897663 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| GTH18_RS18810 () | 3898336..3898761 | - | 426 | Protein_3686 | IS3 family transposase | - |
| GTH18_RS18815 () | 3898771..3899922 | - | 1152 | WP_003029596.1 | IS30 family transposase IS30D | Transposase |
| GTH18_RS18820 () | 3899990..3900247 | - | 258 | Protein_3688 | IS3 family transposase IS911 | Transposase |
| GTH18_RS18825 () | 3900319..3901392 | - | 1074 | Protein_3689 | DEAD/DEAH box helicase family protein | - |
| GTH18_RS18830 () | 3901392..3902297 | - | 906 | WP_048216804.1 | WYL domain-containing protein | - |
| GTH18_RS18835 () | 3902746..3903609 | + | 864 | WP_003029608.1 | GTPase family protein | - |
| GTH18_RS18840 () | 3903701..3904522 | + | 822 | WP_048216805.1 | DUF945 domain-containing protein | - |
| GTH18_RS18845 () | 3904739..3905440 | + | 702 | WP_003029611.1 | WYL domain-containing protein | - |
| GTH18_RS18850 () | 3905481..3905726 | + | 246 | WP_003029614.1 | hypothetical protein | - |
| GTH18_RS18855 () | 3905716..3906156 | + | 441 | WP_003029616.1 | hypothetical protein | - |
| GTH18_RS18860 () | 3906180..3906649 | + | 470 | Protein_3696 | hypothetical protein | - |
| GTH18_RS18865 () | 3907255..3907605 | - | 351 | WP_003036925.1 | Morphinone reductase | - |
| GTH18_RS18870 () | 3907881..3909158 | - | 1278 | WP_003036928.1 | DUF2254 domain-containing protein | - |
| GTH18_RS18875 () | 3909223..3911220 | - | 1998 | WP_016245729.1 | choline BCCT transporter BetT | - |
| GTH18_RS18880 () | 3911724..3911915 | + | 192 | Protein_3700 | DUF905 family protein | - |
| GTH18_RS18885 () | 3911929..3912390 | + | 462 | WP_003031344.1 | antirestriction protein | - |
| GTH18_RS18890 () | 3912406..3912882 | + | 477 | WP_003031345.1 | RadC family protein | - |
| GTH18_RS18895 () | 3912891..3913112 | + | 222 | WP_003031346.1 | DUF987 domain-containing protein | - |
| GTH18_RS18900 () | 3913130..3913447 | + | 318 | WP_003031347.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| GTH18_RS18905 () | 3913468..3913809 | + | 342 | WP_003031349.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| GTH18_RS18915 () | 3914439..3914903 | - | 465 | WP_048216807.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| GTH18_RS18920 () | 3915096..3916544 | - | 1449 | WP_048217399.1 | putative cyclic di-GMP phosphodiesterase PdeG | VF |
| GTH18_RS18925 () | 3916886..3917359 | - | 474 | WP_003838775.1 | hypothetical protein | - |
| GTH18_RS18930 () | 3917334..3918065 | - | 732 | WP_176350211.1 | winged helix-turn-helix domain-containing protein | - |
| GTH18_RS18935 () | 3918210..3918905 | - | 696 | WP_048216809.1 | putative fimbrial chaperone EcpE | VF |
| GTH18_RS18940 () | 3918902..3920518 | - | 1617 | WP_008324500.1 | Fimbria adhesin EcpD | VF |
| GTH18_RS18945 () | 3920523..3923015 | - | 2493 | WP_048216810.1 | putative outer membrane usher protein EcpC | VF |
| GTH18_RS18950 () | 3923074..3923751 | - | 678 | WP_003031363.1 | putative fimbrial chaperone EcpB | VF |
| GTH18_RS18955 () | 3923804..3924391 | - | 588 | WP_003031365.1 | Common pilus major fimbrillin subunit EcpA | VF |
| GTH18_RS18960 () | 3924987..3925706 | - | 720 | WP_003843782.1 | Crp/Fnr family transcriptional regulator | - |
| GTH18_RS18965 () | 3925977..3927230 | - | 1254 | WP_048216811.1 | glutamate-5-semialdehyde dehydrogenase | - |
| GTH18_RS18970 () | 3927242..3928345 | - | 1104 | WP_003031373.1 | glutamate 5-kinase | - |
| GTH18_RS18975 () | 3928636..3929691 | + | 1056 | WP_003031375.1 | phosphoporin PhoE | - |
| GTH18_RS18980 () | 3929748..3930149 | - | 402 | WP_003031376.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|