MGE detailed information
MGE type: Prophage MGE length: 90065 bp
Accession: NZ_CP055247 Location: 2043025..2133089 Organism: Citrobacter freundii strain ZY198 Replicon: chromosome
Accession: NZ_CP055247 Location: 2043025..2133089 Organism: Citrobacter freundii strain ZY198 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTH18_RS09765 () | 2038779..2040551 | + | 1773 | WP_032935372.1 | aspartate--tRNA ligase | - |
| GTH18_RS09770 () | 2040553..2040996 | + | 444 | WP_003844155.1 | dihydroneopterin triphosphate diphosphatase | - |
| GTH18_RS09775 () | 2041025..2041768 | + | 744 | WP_003034865.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| GTH18_RS09780 () | 2041803..2042324 | + | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| GTH18_RS09785 () | 2042405..2043016 | + | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| GTH18_RS09790 () | 2043025..2044035 | + | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| GTH18_RS09795 () | 2044114..2044899 | - | 786 | WP_003034874.1 | hypothetical protein | VF |
| GTH18_RS09800 () | 2044896..2045651 | - | 756 | WP_003034877.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| GTH18_RS09805 () | 2045730..2046674 | + | 945 | WP_003844151.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| GTH18_RS09810 () | 2046690..2048009 | + | 1320 | WP_075261971.1 | murein DD-endopeptidase MepM | - |
| GTH18_RS09815 () | 2048129..2049100 | + | 972 | WP_048217474.1 | Lipid A biosynthesis myristoyltransferase | VF |
| GTH18_RS09820 () | 2049145..2050587 | - | 1443 | WP_176350138.1 | pyruvate kinase | - |
| GTH18_RS09825 () | 2050706..2051575 | - | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| GTH18_RS09830 () | 2051943..2053418 | + | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| GTH18_RS09835 () | 2053652..2055463 | + | 1812 | WP_048217475.1 | phosphogluconate dehydratase | - |
| GTH18_RS09840 () | 2055498..2056139 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| GTH18_RS09845 () | 2056207..2057385 | - | 1179 | WP_003034904.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| GTH18_RS09850 () | 2057517..2057807 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| GTH18_RS09855 () | 2057929..2058282 | + | 354 | WP_003034909.1 | protein YebF | - |
| GTH18_RS09860 () | 2058377..2059036 | + | 660 | WP_016150461.1 | tellurite resistance TerB family protein | - |
| GTH18_RS09865 () | 2059123..2061177 | + | 2055 | WP_176350139.1 | oligopeptidase B | - |
| GTH18_RS09870 () | 2061168..2061830 | - | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| GTH18_RS09875 () | 2061854..2062510 | - | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| GTH18_RS09880 () | 2062617..2062847 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| GTH18_RS09885 () | 2062996..2064747 | + | 1752 | WP_019076528.1 | hypothetical protein ; Integrase | Integrase |
| GTH18_RS09890 () | 2065191..2065889 | + | 699 | WP_176350236.1 | inovirus-type Gp2 protein | - |
| GTH18_RS09895 () | 2066196..2066774 | - | 579 | WP_044701290.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| GTH18_RS09900 () | 2067128..2068030 | - | 903 | WP_003844140.1 | diguanylate cyclase | - |
| GTH18_RS09905 () | 2068349..2068540 | - | 192 | WP_008322661.1 | hypothetical protein | - |
| GTH18_RS09910 () | 2069033..2069620 | - | 588 | WP_106107223.1 | hypothetical protein | - |
| GTH18_RS09915 () | 2070246..2070620 | + | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| GTH18_RS09920 () | 2070624..2071496 | + | 873 | WP_032935389.1 | copper homeostasis membrane protein CopD | - |
| GTH18_RS09925 () | 2071517..2071855 | + | 339 | WP_003034934.1 | YebY family protein | - |
| - () | 2071976..2072119 | - | 144 | - | - | Antitoxin Detail |
| - () | 2072011..2072114 | + | 104 | - | - | Toxin Detail |
| GTH18_RS09930 () | 2072192..2073277 | - | 1086 | WP_065944794.1 | hypothetical protein ; Integrase | Integrase |
| GTH18_RS09935 () | 2073246..2073518 | - | 273 | WP_049040229.1 | excisionase | - |
| GTH18_RS09940 () | 2073583..2073825 | - | 243 | WP_003841647.1 | DUF4060 family protein | - |
| GTH18_RS09945 () | 2073812..2074015 | - | 204 | WP_003841645.1 | hypothetical protein | - |
| GTH18_RS09950 () | 2074008..2074352 | - | 345 | WP_048998009.1 | hypothetical protein | - |
| GTH18_RS09955 () | 2074387..2075478 | - | 1092 | WP_016247084.1 | recombinase RecT | - |
| GTH18_RS09960 () | 2075491..2078814 | - | 3324 | WP_176350140.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| GTH18_RS09965 () | 2078955..2079116 | - | 162 | WP_164562699.1 | hypothetical protein | - |
| GTH18_RS09970 () | 2079128..2079334 | - | 207 | WP_016156718.1 | hypothetical protein | - |
| GTH18_RS09975 () | 2079514..2079807 | + | 294 | WP_049041823.1 | hypothetical protein | - |
| GTH18_RS09980 () | 2079788..2080057 | - | 270 | WP_016247087.1 | hypothetical protein | - |
| GTH18_RS09985 () | 2080430..2080729 | - | 300 | WP_176350237.1 | hypothetical protein | - |
| GTH18_RS09990 () | 2080881..2081147 | - | 267 | WP_176350141.1 | hypothetical protein | - |
| GTH18_RS09995 () | 2081308..2081721 | - | 414 | WP_176350142.1 | helix-turn-helix domain-containing protein | - |
| GTH18_RS10000 () | 2081794..2082012 | + | 219 | WP_060683703.1 | helix-turn-helix domain-containing protein | - |
| GTH18_RS10005 () | 2082024..2082563 | + | 540 | WP_176350143.1 | toxin YdaT domain-containing protein | - |
| GTH18_RS10010 () | 2082731..2083678 | + | 948 | WP_016156235.1 | hypothetical protein | - |
| GTH18_RS10015 () | 2083681..2084430 | + | 750 | WP_075847201.1 | ATP-binding protein | - |
| GTH18_RS10020 () | 2084449..2084760 | + | 312 | WP_176350144.1 | hypothetical protein | - |
| GTH18_RS10025 () | 2084757..2085452 | + | 696 | WP_176350145.1 | hypothetical protein | - |
| GTH18_RS10030 () | 2085449..2085973 | + | 525 | WP_176350146.1 | ead/Ea22-like family protein | - |
| GTH18_RS10035 () | 2085975..2086283 | + | 309 | WP_057520408.1 | hypothetical protein | - |
| GTH18_RS10040 () | 2086297..2087088 | + | 792 | WP_176350147.1 | hypothetical protein | - |
| GTH18_RS10045 () | 2087690..2087923 | + | 234 | WP_016236996.1 | DinI family protein | - |
| GTH18_RS10050 () | 2088041..2088289 | + | 249 | WP_001568777.1 | hypothetical protein | - |
| GTH18_RS10055 () | 2088324..2088923 | + | 600 | WP_176350148.1 | DUF1367 family protein | - |
| GTH18_RS10060 () | 2088923..2089129 | + | 207 | WP_176350149.1 | hypothetical protein | - |
| GTH18_RS10065 () | 2089132..2089740 | + | 609 | WP_128612441.1 | recombination protein NinG | - |
| GTH18_RS10070 () | 2089737..2089877 | + | 141 | WP_176350150.1 | YlcG family protein | - |
| GTH18_RS10075 () | 2089874..2090704 | + | 831 | WP_176350151.1 | antitermination protein | - |
| GTH18_RS10080 () | 2091099..2091497 | + | 399 | WP_049041756.1 | membrane protein | - |
| GTH18_RS10085 () | 2091494..2091769 | + | 276 | WP_049041753.1 | phage holin family protein | - |
| GTH18_RS10090 () | 2091766..2092311 | + | 546 | WP_172950533.1 | glycoside hydrolase family 108 protein | - |
| GTH18_RS10095 () | 2092308..2092580 | + | 273 | WP_097759313.1 | hypothetical protein | - |
| GTH18_RS10100 () | 2092537..2092716 | + | 180 | WP_176350152.1 | hypothetical protein | - |
| GTH18_RS10105 () | 2092777..2092956 | + | 180 | WP_176350153.1 | hypothetical protein | - |
| GTH18_RS10110 () | 2093069..2093818 | + | 750 | WP_176350154.1 | hypothetical protein | VF |
| GTH18_RS10115 () | 2093951..2094139 | + | 189 | WP_103285385.1 | hypothetical protein | - |
| GTH18_RS10120 () | 2094143..2095147 | + | 1005 | WP_176350155.1 | terminase small subunit | - |
| GTH18_RS10125 () | 2095125..2096429 | + | 1305 | WP_064367587.1 | terminase family protein | - |
| GTH18_RS10130 () | 2096434..2097855 | + | 1422 | WP_176350156.1 | DUF4055 domain-containing protein | - |
| GTH18_RS10135 () | 2097842..2098954 | + | 1113 | WP_176350157.1 | hypothetical protein | - |
| GTH18_RS10140 () | 2099059..2099823 | + | 765 | WP_064360276.1 | hypothetical protein | - |
| GTH18_RS10145 () | 2099911..2101047 | + | 1137 | WP_128318973.1 | P22 coat - protein 5 family protein | - |
| GTH18_RS10150 () | 2101177..2101398 | + | 222 | Protein_1986 | hypothetical protein | - |
| GTH18_RS10155 () | 2101448..2101858 | + | 411 | WP_176350158.1 | protein singed | - |
| GTH18_RS10160 () | 2101860..2102114 | + | 255 | WP_176350159.1 | hypothetical protein | - |
| GTH18_RS10165 () | 2102124..2102357 | + | 234 | WP_176350160.1 | hypothetical protein | - |
| GTH18_RS10170 () | 2102344..2102727 | + | 384 | WP_176350161.1 | glutamate 5-kinase | - |
| GTH18_RS10175 () | 2102729..2103280 | + | 552 | WP_134935965.1 | hypothetical protein | - |
| GTH18_RS10180 () | 2103277..2103669 | + | 393 | WP_134935963.1 | electron transfer flavoprotein subunit beta | - |
| GTH18_RS10185 () | 2103692..2104864 | + | 1173 | WP_176350162.1 | Ig-like domain-containing protein | - |
| GTH18_RS10190 () | 2104919..2105419 | + | 501 | WP_176350163.1 | hypothetical protein | - |
| GTH18_RS10195 () | 2105539..2105736 | + | 198 | WP_074188134.1 | hypothetical protein | - |
| GTH18_RS10200 () | 2105803..2106486 | + | 684 | WP_046852441.1 | hypothetical protein | - |
| GTH18_RS10205 () | 2106595..2106963 | + | 369 | WP_053085177.1 | zinc ribbon domain-containing protein | - |
| GTH18_RS10210 () | 2107045..2110197 | + | 3153 | WP_176350164.1 | phage tail length tape measure family protein | - |
| GTH18_RS10215 () | 2110197..2110661 | + | 465 | WP_176350165.1 | hypothetical protein | - |
| GTH18_RS10220 () | 2110658..2111140 | + | 483 | WP_176350166.1 | DUF1833 family protein | - |
| GTH18_RS10225 () | 2111150..2111332 | + | 183 | WP_176350167.1 | hypothetical protein | - |
| GTH18_RS10230 () | 2111301..2111705 | + | 405 | WP_176350168.1 | nitrite transporter | - |
| GTH18_RS10235 () | 2111702..2114791 | + | 3090 | WP_176350169.1 | kinase | - |
| GTH18_RS10240 () | 2114847..2115254 | + | 408 | Protein_2004 | phage tail protein | - |
| GTH18_RS10245 () | 2117560..2117844 | + | 285 | WP_176350170.1 | hypothetical protein | - |
| GTH18_RS10250 () | 2118137..2118325 | - | 189 | WP_176350171.1 | hypothetical protein | - |
| GTH18_RS10255 () | 2118328..2118642 | + | 315 | WP_176350172.1 | hypothetical protein | - |
| GTH18_RS10260 () | 2119139..2119780 | + | 642 | WP_048217477.1 | protein-serine/threonine phosphatase | - |
| GTH18_RS10265 () | 2119781..2119972 | - | 192 | WP_003034941.1 | YebW family protein | - |
| GTH18_RS10270 () | 2120075..2120311 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| GTH18_RS10275 () | 2120412..2121833 | - | 1422 | WP_075261972.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| GTH18_RS10280 () | 2121913..2124546 | - | 2634 | WP_003034947.1 | hypothetical protein | VF |
| GTH18_RS10285 () | 2124515..2125798 | - | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| GTH18_RS10290 () | 2125927..2126424 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| GTH18_RS10295 () | 2126521..2127207 | + | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| GTH18_RS10300 () | 2127227..2129275 | + | 2049 | WP_048217478.1 | carboxy terminal-processing peptidase | - |
| GTH18_RS10305 () | 2129468..2130349 | + | 882 | WP_003034964.1 | protease HtpX | - |
| GTH18_RS10310 () | 2130396..2131769 | - | 1374 | WP_048217479.1 | MFS transporter | - |
| GTH18_RS10315 () | 2131944..2132735 | + | 792 | WP_003833778.1 | DNA-binding transcriptional regulator KdgR | - |
| GTH18_RS10320 () | 2132850..2133089 | - | 240 | WP_003841988.1 | hypothetical protein | - |
| GTH18_RS10325 () | 2133254..2133397 | + | 144 | WP_003034977.1 | PhoP/PhoQ regulator MgrB | - |
| GTH18_RS10330 () | 2133472..2133756 | + | 285 | WP_003841991.1 | YebO family protein | - |
| GTH18_RS10335 () | 2134393..2134536 | + | 144 | WP_003034983.1 | YobF family protein | - |
| GTH18_RS10340 () | 2134549..2134758 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| GTH18_RS10345 () | 2134978..2136723 | + | 1746 | WP_048217480.1 | peptidoglycan glycosyltransferase FtsI | - |
| GTH18_RS10350 () | 2136787..2137596 | + | 810 | WP_048217481.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|