MGE detailed information
MGE type: Prophage MGE length: 57232 bp
Accession: NZ_CP055219 Location: 341785..399016 Organism: Shigella flexneri strain STEFF_12 Replicon: chromosome
Accession: NZ_CP055219 Location: 341785..399016 Organism: Shigella flexneri strain STEFF_12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ41_RS01770 (337365) | 337365..338350 | - | 986 | Protein_348 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| HUZ41_RS01775 (338539) | 338539..339069 | + | 531 | WP_000428998.1 | cytochrome b561 | - |
| HUZ41_RS01780 (339314) | 339314..339487 | + | 174 | WP_000731833.1 | periplasmic protein | - |
| HUZ41_RS01785 (339513) | 339513..339581 | + | 69 | WP_211180495.1 | protein YncP | - |
| HUZ41_RS01790 (339559) | 339559..339690 | - | 132 | WP_228940733.1 | type I toxin-antitoxin system Hok family toxin | - |
| HUZ41_RS01795 (339629) | 339629..339766 | - | 138 | Protein_353 | hypothetical protein | - |
| HUZ41_RS01800 (340107) | 340107..341747 | + | 1641 | WP_001098553.1 | methyl-accepting chemotaxis protein Trg | - |
| HUZ41_RS01805 (341785) | 341785..342708 | - | 924 | WP_239637037.1 | LysR substrate-binding domain-containing protein | - |
| HUZ41_RS01810 (342925) | 342925..344268 | + | 1344 | WP_001723470.1 | VOC family protein | - |
| HUZ41_RS01815 (344493) | 344493..346148 | + | 1656 | WP_000375956.1 | glucan biosynthesis protein OpgD | - |
| HUZ41_RS01820 (346287) | 346287..346511 | + | 225 | WP_001296778.1 | YdcH family protein | - |
| HUZ41_RS01825 (346574) | 346574..347113 | + | 540 | WP_001491065.1 | 50S ribosomal protein L7/L12-serine acetyltransferase | - |
| HUZ41_RS01830 (347105) | 347105..348085 | - | 981 | WP_024238791.1 | YdcK family protein | - |
| HUZ41_RS01835 (348209) | 348209..349201 | + | 993 | WP_001296725.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| HUZ41_RS01840 (349198) | 349198..349791 | + | 594 | WP_001723473.1 | tellurite resistance methyltransferase TehB | - |
| HUZ41_RS01845 (350094) | 350094..350762 | + | 669 | WP_001261013.1 | DUF3313 domain-containing protein | - |
| HUZ41_RS01850 (350861) | 350861..351286 | - | 426 | Protein_364 | IS200/IS605 family transposase | - |
| HUZ41_RS01855 (351294) | 351294..352502 | + | 1209 | WP_000826416.1 | IS200-IS605 family transposase IS609 | Transposase |
| HUZ41_RS01860 (352542) | 352542..353717 | - | 1176 | WP_001236265.1 | BenE family transporter YdcO | - |
| HUZ41_RS01865 (353809) | 353809..354345 | + | 537 | WP_000429155.1 | DNA-binding transcriptional regulator SutR | - |
| HUZ41_RS01870 (354418) | 354418..356379 | + | 1962 | WP_001303492.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| HUZ41_RS01875 (356471) | 356471..356701 | - | 231 | WP_000494244.1 | YncJ family protein | - |
| HUZ41_RS01880 (356923) | 356923..357099 | + | 177 | WP_000813794.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
| HUZ41_RS01885 (357145) | 357145..357561 | + | 417 | WP_001270286.1 | type II toxin-antitoxin system antitoxin HicB | Antitoxin Detail |
| HUZ41_RS01890 (357640) | 357640..359046 | + | 1407 | WP_239637038.1 | PLP-dependent aminotransferase family protein | - |
| HUZ41_RS01895 (359291) | 359291..360436 | + | 1146 | WP_000047418.1 | ABC transporter substrate-binding protein | - |
| HUZ41_RS01900 (360454) | 360454..361467 | + | 1014 | WP_024238793.1 | hypothetical protein | VF |
| HUZ41_RS01905 (361468) | 361468..362409 | + | 942 | WP_001251319.1 | ABC transporter permease | - |
| HUZ41_RS01910 (362399) | 362399..363193 | + | 795 | WP_000555471.1 | hypothetical protein | VF |
| HUZ41_RS01915 (363215) | 363215..364639 | + | 1425 | WP_001163874.1 | aminobutyraldehyde dehydrogenase | - |
| HUZ41_RS01920 (364849) | 364849..365658 | + | 810 | WP_000867985.1 | hypothetical protein | VF |
| HUZ41_RS01925 (366060) | 366060..366155 | - | 96 | WP_001310798.1 | stress response membrane protein YncL | - |
| HUZ41_RS01930 (366350) | 366350..366523 | + | 174 | WP_000061178.1 | orphan toxin OrtT | - |
| HUZ41_RS01935 (366609) | 366609..366842 | + | 234 | WP_000018633.1 | DUF2526 family protein YdcY | - |
| HUZ41_RS01940 (366843) | 366843..367292 | - | 450 | WP_001076535.1 | DMT family transporter | - |
| HUZ41_RS01945 (367289) | 367289..367807 | - | 519 | WP_001310799.1 | L-methionine sulfoximine/L-methionine sulfone acetyltransferase | - |
| HUZ41_RS01950 (367988) | 367988..369025 | + | 1038 | WP_000531462.1 | NADPH-dependent curcumin/dihydrocurcumin reductase | - |
| HUZ41_RS01955 (369223) | 369223..369888 | + | 666 | WP_001300742.1 | colanic acid/biofilm transcriptional regulator McbR | - |
| HUZ41_RS01960 (369924) | 369924..372026 | - | 2103 | WP_000689363.1 | hypothetical protein | VF |
| HUZ41_RS01965 (372268) | 372268..373329 | + | 1062 | WP_000550695.1 | YncE family protein | - |
| HUZ41_RS01970 (373442) | 373442..374941 | - | 1500 | WP_024238794.1 | L-asparagine permease | - |
| HUZ41_RS01975 (375208) | 375208..375651 | + | 444 | WP_100620860.1 | glutathione S-transferase | - |
| HUZ41_RS01980 (375702) | 375702..376399 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| HUZ41_RS01985 (377263) | 377263..377475 | - | 213 | WP_000226995.1 | YncH family protein | - |
| HUZ41_RS01990 (377551) | 377551..377739 | - | 189 | Protein_392 | glutathione S-transferase | - |
| HUZ41_RS02000 (378494) | 378494..380596 | + | 2103 | WP_220400532.1 | hypothetical protein | VF |
| HUZ41_RS02005 (380663) | 380663..384871 | + | 4209 | WP_032253545.1 | hypothetical protein | VF |
| HUZ41_RS02010 (384883) | 384883..385278 | + | 396 | WP_000759875.1 | RHS element protein dsORF-e4 | - |
| HUZ41_RS02015 (385300) | 385300..385419 | - | 120 | Protein_397 | IS1 family transposase | - |
| HUZ41_RS02020 (385726) | 385726..386862 | + | 1137 | WP_239637039.1 | ISAs1 family transposase ISEc5 | Transposase |
| HUZ41_RS02025 (386962) | 386962..387195 | + | 234 | WP_001120143.1 | tautomerase PptA | - |
| HUZ41_RS02030 (387192) | 387192..387761 | - | 570 | WP_000085899.1 | flavin reductase family protein | - |
| HUZ41_RS02035 (387934) | 387934..388779 | + | 846 | WP_000187919.1 | N-hydroxyarylamine O-acetyltransferase | - |
| HUZ41_RS02040 (388875) | 388875..389768 | - | 894 | WP_000804381.1 | hypothetical protein | VF |
| HUZ41_RS02045 (389847) | 389847..390527 | - | 681 | WP_024238750.1 | respiratory nitrate reductase subunit gamma | - |
| HUZ41_RS02050 (390524) | 390524..391219 | - | 696 | WP_001166353.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| HUZ41_RS02055 (391219) | 391219..392763 | - | 1545 | WP_000702542.1 | nitrate reductase subunit beta | - |
| HUZ41_RS02060 (392760) | 392760..396500 | - | 3741 | WP_000040458.1 | nitrate reductase Z subunit alpha | - |
| HUZ41_RS02065 (396582) | 396582..397970 | - | 1389 | WP_239637040.1 | nitrate/nitrite transporter NarU | - |
| HUZ41_RS02070 (398319) | 398319..399016 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| HUZ41_RS02075 (399071) | 399071..400401 | - | 1331 | Protein_409 | leucine-rich repeat domain-containing protein | - |
| HUZ41_RS02080 (400440) | 400440..400715 | - | 276 | Protein_410 | porin | - |
| HUZ41_RS02085 (400975) | 400975..401856 | - | 882 | WP_000198205.1 | aromatic amino acid efflux DMT transporter YddG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|