MGE detailed information
MGE type: Genomic_island MGE length: 46349 bp
Accession: NZ_CP055219 Location: 2799019..2845367 Organism: Shigella flexneri strain STEFF_12 Replicon: chromosome
Accession: NZ_CP055219 Location: 2799019..2845367 Organism: Shigella flexneri strain STEFF_12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ41_RS13840 (2795292) | 2795292..2796674 | - | 1383 | WP_000834439.1 | glycoside-pentoside-hexuronide family transporter | - |
| HUZ41_RS13850 (2797333) | 2797333..2798545 | + | 1213 | Protein_2725 | tyrosine-type recombinase/integrase | - |
| HUZ41_RS13855 (2799019) | 2799019..2799716 | + | 698 | WP_237158192.1 | IS1 family transposase IS1A | Transposase |
| HUZ41_RS13860 (2799841) | 2799841..2803338 | - | 3498 | WP_088209975.1 | hypothetical protein | VF |
| HUZ41_RS13865 (2803923) | 2803923..2804168 | - | 246 | Protein_2728 | IS91 family transposase | - |
| HUZ41_RS13870 (2804230) | 2804230..2805465 | - | 1236 | Protein_2729 | IS3 family transposase ISKpn38 | Transposase |
| HUZ41_RS13875 (2805551) | 2805551..2805976 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| HUZ41_RS13880 (2805973) | 2805973..2806323 | + | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| HUZ41_RS13885 (2806354) | 2806354..2806566 | + | 213 | Protein_2732 | IS66 family transposase ISEc47 | Transposase |
| HUZ41_RS13890 (2806552) | 2806552..2806725 | + | 174 | Protein_2733 | IS66 family transposase ISEc47 | Transposase |
| HUZ41_RS13895 (2806741) | 2806741..2807217 | + | 477 | WP_004025728.1 | RadC family protein | - |
| HUZ41_RS13900 (2807304) | 2807304..2807525 | + | 222 | Protein_2735 | DUF987 domain-containing protein | - |
| HUZ41_RS13905 (2807605) | 2807605..2807973 | + | 369 | WP_001285605.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HUZ41_RS13910 (2808063) | 2808063..2808440 | + | 378 | WP_239636889.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| HUZ41_RS13915 (2808437) | 2808437..2808586 | + | 150 | Protein_2738 | DUF5983 family protein | - |
| HUZ41_RS13920 (2808662) | 2808662..2808859 | + | 198 | WP_086795284.1 | DUF957 domain-containing protein | - |
| HUZ41_RS13925 (2808944) | 2808944..2809786 | + | 843 | WP_001696593.1 | DUF4942 domain-containing protein | - |
| HUZ41_RS13930 (2810254) | 2810254..2810561 | + | 308 | Protein_2741 | IS3 family transposase | - |
| HUZ41_RS13935 (2810844) | 2810844..2811458 | - | 615 | WP_032322729.1 | hypothetical protein | VF |
| HUZ41_RS13940 (2811543) | 2811543..2811821 | - | 279 | WP_000245815.1 | hypothetical protein | VF |
| HUZ41_RS13945 (2811827) | 2811827..2812048 | - | 222 | WP_001053840.1 | hypothetical protein | VF |
| HUZ41_RS13950 (2812083) | 2812083..2812490 | - | 408 | WP_000228584.1 | hypothetical protein | VF |
| HUZ41_RS13955 (2812497) | 2812497..2813462 | - | 966 | WP_001091991.1 | hypothetical protein | VF |
| HUZ41_RS13960 (2813483) | 2813483..2814622 | - | 1140 | WP_024238745.1 | hypothetical protein | VF |
| HUZ41_RS13965 (2814635) | 2814635..2815207 | - | 573 | WP_001570448.1 | hypothetical protein | VF |
| HUZ41_RS13970 (2815257) | 2815257..2816312 | - | 1056 | WP_001273442.1 | hypothetical protein | VF |
| HUZ41_RS13975 (2816455) | 2816455..2817675 | + | 1221 | WP_024238744.1 | hypothetical protein | VF |
| HUZ41_RS13980 (2817879) | 2817879..2820698 | - | 2820 | WP_000627892.1 | hypothetical protein | VF |
| HUZ41_RS13985 (2820758) | 2820758..2821228 | - | 471 | WP_024238743.1 | hypothetical protein | VF |
| HUZ41_RS13990 (2821362) | 2821362..2823020 | - | 1659 | WP_001374733.1 | hypothetical protein | VF |
| HUZ41_RS13995 (2823341) | 2823341..2823952 | - | 612 | WP_000492695.1 | hypothetical protein | VF |
| HUZ41_RS14000 (2824227) | 2824227..2824589 | + | 363 | WP_001005220.1 | hypothetical protein | VF |
| HUZ41_RS14005 (2824790) | 2824790..2825299 | - | 510 | WP_001592936.1 | hypothetical protein | VF |
| HUZ41_RS14010 (2825330) | 2825330..2826247 | - | 918 | WP_000803679.1 | hypothetical protein | VF |
| HUZ41_RS14015 (2826210) | 2826210..2826626 | - | 417 | WP_032355558.1 | type III secretion system LEE needle length regulator EscP | - |
| HUZ41_RS14020 (2826619) | 2826619..2826939 | - | 321 | WP_001062957.1 | hypothetical protein | VF |
| HUZ41_RS14025 (2826999) | 2826999..2828339 | - | 1341 | WP_000622546.1 | hypothetical protein | VF |
| HUZ41_RS14030 (2828323) | 2828323..2830350 | - | 2028 | WP_024239762.1 | hypothetical protein | VF |
| HUZ41_RS14035 (2830347) | 2830347..2830700 | - | 354 | WP_001050992.1 | hypothetical protein | VF |
| HUZ41_RS14040 (2830885) | 2830885..2831181 | + | 297 | WP_239636890.1 | hypothetical protein | VF |
| HUZ41_RS14045 (2831262) | 2831262..2831639 | + | 378 | WP_001059798.1 | hypothetical protein | VF |
| HUZ41_RS14050 (2831642) | 2831642..2832214 | + | 573 | WP_000716189.1 | hypothetical protein | VF |
| HUZ41_RS14055 (2832220) | 2832220..2832675 | + | 456 | WP_001063678.1 | hypothetical protein | VF |
| HUZ41_RS14060 (2832675) | 2832675..2834213 | + | 1539 | WP_000723931.1 | hypothetical protein | VF |
| HUZ41_RS14065 (2834227) | 2834227..2834682 | + | 456 | WP_000087467.1 | hypothetical protein | VF |
| HUZ41_RS14070 (2835066) | 2835066..2835479 | - | 414 | WP_000444178.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| HUZ41_RS14075 (2835550) | 2835550..2835905 | - | 356 | Protein_2770 | type III secretion system LEE GrlA-binding negative regulator GrlR | - |
| HUZ41_RS14080 (2836101) | 2836101..2836559 | + | 459 | WP_000720639.1 | hypothetical protein | VF |
| HUZ41_RS14085 (2836556) | 2836556..2837593 | - | 1038 | WP_001291696.1 | hypothetical protein | VF |
| HUZ41_RS14090 (2837586) | 2837586..2838362 | - | 777 | WP_001002835.1 | hypothetical protein | VF |
| HUZ41_RS14095 (2838362) | 2838362..2838631 | - | 270 | WP_000379425.1 | hypothetical protein | VF |
| HUZ41_RS14100 (2838631) | 2838631..2839284 | - | 654 | WP_001374316.1 | hypothetical protein | VF |
| HUZ41_RS14105 (2839289) | 2839289..2839942 | - | 654 | WP_000780686.1 | hypothetical protein | VF |
| HUZ41_RS14110 (2839929) | 2839929..2840528 | - | 600 | WP_239636891.1 | hypothetical protein | VF |
| HUZ41_RS14115 (2840525) | 2840525..2840839 | - | 315 | WP_001301632.1 | hypothetical protein | VF |
| HUZ41_RS14120 (2840852) | 2840852..2841070 | - | 219 | WP_239636892.1 | hypothetical protein | VF |
| HUZ41_RS14125 (2841085) | 2841085..2841456 | - | 372 | WP_001339878.1 | type III secretion system LEE master regulator Ler | - |
| HUZ41_RS14130 (2842776) | 2842776..2843921 | + | 1146 | WP_122994642.1 | hypothetical protein | VF |
| HUZ41_RS14135 (2844049) | 2844049..2844867 | + | 819 | WP_239636893.1 | YjiK family protein | - |
| HUZ41_RS14140 (2845242) | 2845242..2845322 | - | 81 | Protein_2783 | N-acetyltransferase | - |
| HUZ41_RS14145 (2845317) | 2845317..2845422 | - | 106 | Protein_2784 | type VI secretion system contractile sheath small subunit | - |
| HUZ41_RS14150 (2845638) | 2845638..2845844 | - | 207 | WP_001310360.1 | hypothetical protein | - |
| HUZ41_RS14155 (2845886) | 2845886..2846809 | + | 924 | WP_000535946.1 | carboxylate/amino acid/amine transporter | - |
| HUZ41_RS14160 (2846813) | 2846813..2847631 | - | 819 | WP_000779411.1 | lipoprotein NlpA | - |
| HUZ41_RS14165 (2847853) | 2847853..2848146 | + | 294 | WP_001297978.1 | protein YicS | - |
| HUZ41_RS14170 (2848187) | 2848187..2849377 | - | 1191 | WP_239636894.1 | purine ribonucleoside efflux pump NepI | - |
| HUZ41_RS14175 (2849588) | 2849588..2850040 | - | 453 | WP_001295241.1 | DUF1198 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|