MGE detailed information
MGE type: Prophage MGE length: 18571 bp
Accession: NZ_CP055219 Location: 230490..249060 Organism: Shigella flexneri strain STEFF_12 Replicon: chromosome
Accession: NZ_CP055219 Location: 230490..249060 Organism: Shigella flexneri strain STEFF_12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ41_RS01210 (225999) | 225999..227525 | - | 1527 | WP_239637028.1 | p-aminobenzoyl-glutamate transporter | - |
| HUZ41_RS01215 (227559) | 227559..229004 | - | 1446 | WP_023281202.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| HUZ41_RS01220 (229004) | 229004..230314 | - | 1311 | WP_024238600.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| HUZ41_RS01225 (230490) | 230490..231398 | + | 909 | WP_000885454.1 | LysR family transcriptional regulator | - |
| HUZ41_RS01230 (231728) | 231728..232291 | + | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| HUZ41_RS01235 (232312) | 232312..233544 | - | 1233 | WP_239637029.1 | diguanylate cyclase DgcM | - |
| HUZ41_RS01240 (233738) | 233738..233785 | + | 48 | WP_211180494.1 | protein YnaN | - |
| HUZ41_RS01245 (233799) | 233799..234782 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| HUZ41_RS25625 (235057) | 235057..235230 | + | 174 | WP_001296046.1 | protein YnaL | - |
| HUZ41_RS01250 (235260) | 235260..236633 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| HUZ41_RS01255 (236762) | 236762..237697 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| HUZ41_RS01260 (237749) | 237749..238984 | - | 1236 | WP_000040852.1 | hypothetical protein ; Integrase | Integrase |
| HUZ41_RS01265 (238986) | 238986..239201 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (239305) | 239305..239483 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (239305) | 239305..239483 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (239305) | 239305..239483 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (239305) | 239305..239483 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| HUZ41_RS01270 (239280) | 239280..239489 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| HUZ41_RS01275 (239482) | 239482..239676 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| HUZ41_RS01280 (239733) | 239733..240542 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| HUZ41_RS01285 (240535) | 240535..241884 | - | 1350 | Protein_251 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| HUZ41_RS01295 (242646) | 242646..243911 | - | 1266 | Protein_253 | exonuclease VIII | - |
| HUZ41_RS01300 (244013) | 244013..244288 | - | 276 | WP_000632297.1 | protein RacC | - |
| HUZ41_RS01305 (244363) | 244363..244533 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| HUZ41_RS01310 (244533) | 244533..244754 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| HUZ41_RS01315 (245196) | 245196..245684 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| HUZ41_RS01320 (245681) | 245681..245836 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| HUZ41_RS01325 (245847) | 245847..246026 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| HUZ41_RS01330 (246269) | 246269..246688 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| HUZ41_RS01335 (246768) | 246768..247022 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| HUZ41_RS01340 (247019) | 247019..247441 | + | 423 | WP_000693803.1 | toxin YdaT family protein | - |
| HUZ41_RS01345 (247519) | 247519..248307 | + | 789 | WP_001326319.1 | hypothetical protein | - |
| HUZ41_RS01350 (248314) | 248314..249060 | + | 747 | WP_000788982.1 | ATP-binding protein | - |
| HUZ41_RS01355 (249083) | 249083..249808 | + | 726 | WP_024238604.1 | DUF1627 domain-containing protein | - |
| HUZ41_RS01360 (249825) | 249825..250247 | + | 423 | WP_021554373.1 | DUF977 family protein | - |
| HUZ41_RS01365 (250457) | 250457..251473 | + | 1017 | WP_239637030.1 | anti-phage deoxyguanosine triphosphatase | - |
| HUZ41_RS01370 (251477) | 251477..251818 | + | 342 | WP_239637031.1 | hypothetical protein | - |
| HUZ41_RS01375 (252229) | 252229..253122 | + | 894 | WP_021554375.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|