MGE detailed information
MGE type: Genomic_island MGE length: 15661 bp
Accession: NZ_CP055199 Location: 322030..337690 Organism: Shigella flexneri strain STEFF_3 Replicon: chromosome
Accession: NZ_CP055199 Location: 322030..337690 Organism: Shigella flexneri strain STEFF_3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ39_RS01455 (317336) | 317336..317533 | + | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| HUZ39_RS01460 (317567) | 317567..318304 | - | 738 | WP_000287501.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| HUZ39_RS01465 (318593) | 318593..319042 | - | 450 | WP_001023257.1 | copper resistance protein | - |
| HUZ39_RS01470 (319277) | 319277..321094 | + | 1818 | WP_000925242.1 | multicopper oxidase PcoA | - |
| HUZ39_RS01475 (321100) | 321100..321990 | + | 891 | WP_023063424.1 | copper resistance outer membrane transporter PcoB | - |
| HUZ39_RS01480 (322030) | 322030..322410 | + | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| HUZ39_RS01485 (322415) | 322415..323344 | + | 930 | WP_000998778.1 | copper resistance inner membrane protein PcoD | - |
| HUZ39_RS01490 (323399) | 323399..324079 | + | 681 | WP_001188930.1 | Transcriptional activator protein CopR | VF |
| HUZ39_RS01495 (324076) | 324076..325476 | + | 1401 | WP_001211180.1 | copper resistance membrane spanning protein PcoS | - |
| HUZ39_RS01500 (325694) | 325694..326128 | + | 435 | WP_000723069.1 | copper resistance system metallochaperone PcoE | - |
| HUZ39_RS01505 (326788) | 326788..327840 | - | 1053 | WP_001028905.1 | DUF2776 domain-containing protein | - |
| HUZ39_RS01510 (328224) | 328224..329813 | + | 1590 | WP_000862320.1 | DUF4049 domain-containing protein | - |
| HUZ39_RS01515 (330075) | 330075..331697 | + | 1623 | WP_001307442.1 | DUF4049 domain-containing protein | - |
| HUZ39_RS01520 (331887) | 331887..332000 | + | 114 | WP_001296785.1 | protein YhiY | - |
| HUZ39_RS01525 (332063) | 332063..333130 | + | 1068 | WP_000361485.1 | HlyD family secretion protein | - |
| HUZ39_RS01530 (333127) | 333127..335862 | + | 2736 | WP_000149125.1 | Ribosome-associated ATPase | VF |
| HUZ39_RS01535 (335862) | 335862..336986 | + | 1125 | WP_001314210.1 | ABC transporter permease | - |
| HUZ39_RS01540 (337059) | 337059..337334 | + | 276 | WP_001259388.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HUZ39_RS01545 (337331) | 337331..337690 | + | 360 | WP_000593555.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HUZ39_RS01550 (337810) | 337810..338211 | - | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| HUZ39_RS01555 (338217) | 338217..339023 | - | 807 | WP_000173666.1 | nickel import ATP-binding protein NikE | - |
| HUZ39_RS01560 (339020) | 339020..339784 | - | 765 | WP_001136236.1 | nickel import ATP-binding protein NikD | - |
| HUZ39_RS01565 (339784) | 339784..340617 | - | 834 | WP_106464827.1 | nickel ABC transporter permease subunit NikC | - |
| HUZ39_RS01570 (340614) | 340614..341558 | - | 945 | WP_000947068.1 | nickel ABC transporter permease subunit NikB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|