MGE detailed information
MGE type: Genomic_island MGE length: 19914 bp
Accession: NZ_CP055199 Location: 2464577..2484490 Organism: Shigella flexneri strain STEFF_3 Replicon: chromosome
Accession: NZ_CP055199 Location: 2464577..2484490 Organism: Shigella flexneri strain STEFF_3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ39_RS12085 (2464577) | 2464577..2464843 | + | 267 | WP_001296726.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| HUZ39_RS12090 (2464843) | 2464843..2466165 | + | 1323 | WP_001125454.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| HUZ39_RS12095 (2466477) | 2466477..2466685 | + | 209 | Protein_2374 | AraC family transcriptional regulator | - |
| HUZ39_RS12100 (2467117) | 2467117..2467680 | + | 564 | WP_001296758.1 | Type-1 fimbrial protein, A chain | VF |
| HUZ39_RS12105 (2468041) | 2468041..2468751 | + | 711 | WP_001195166.1 | Chaperone protein FocC | VF |
| HUZ39_RS12110 (2468793) | 2468793..2471444 | + | 2652 | WP_001348041.1 | Outer membrane usher protein FimD | VF |
| HUZ39_RS12115 (2471458) | 2471458..2471988 | + | 531 | WP_106464791.1 | Protein FimF | VF |
| HUZ39_RS12120 (2472001) | 2472001..2472504 | + | 504 | WP_000825458.1 | Protein FimG | VF |
| HUZ39_RS12125 (2472564) | 2472564..2473478 | + | 915 | WP_000520679.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| HUZ39_RS12130 (2473812) | 2473812..2476091 | + | 2280 | WP_106464790.1 | acid resistance putative oxidoreductase YdeP | - |
| HUZ39_RS12135 (2476339) | 2476339..2476536 | + | 198 | WP_000543389.1 | two-component system connector SafA | - |
| HUZ39_RS12140 (2476611) | 2476611..2477372 | + | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| HUZ39_RS12145 (2477774) | 2477774..2479456 | + | 1683 | WP_001295684.1 | sulfatase | - |
| HUZ39_RS12150 (2479508) | 2479508..2480665 | + | 1158 | WP_001295683.1 | anaerobic sulfatase maturase | - |
| HUZ39_RS12155 (2480631) | 2480631..2480753 | - | 123 | WP_120795387.1 | protein YneP | - |
| HUZ39_RS12160 (2480956) | 2480956..2481927 | + | 972 | Protein_2387 | SbmA/BacA-like family transporter | - |
| HUZ39_RS12165 (2481984) | 2481984..2482729 | + | 746 | WP_239637890.1 | IS1 family transposase IS1R | Transposase |
| HUZ39_RS12170 (2482673) | 2482673..2483647 | - | 975 | WP_012478345.1 | IS30 family transposase ISApl1 | Transposase |
| HUZ39_RS12175 (2483771) | 2483771..2484490 | + | 720 | Protein_2390 | ATP-binding cassette domain-containing protein | - |
| HUZ39_RS12180 (2484528) | 2484528..2486900 | + | 2373 | WP_000832440.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|