MGE detailed information
MGE type: Genomic_island MGE length: 29185 bp
Accession: NZ_CP055194 Location: 4145233..4174417 Organism: Shigella flexneri strain STEFF_10 Replicon: chromosome
Accession: NZ_CP055194 Location: 4145233..4174417 Organism: Shigella flexneri strain STEFF_10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ40_RS20120 (4142839) | 4142839..4143564 | - | 726 | WP_239637850.1 | type 1 fimbria chaperone FimC | - |
| HUZ40_RS20125 (4143601) | 4143601..4144140 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| HUZ40_RS20130 (4144205) | 4144205..4144753 | - | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| HUZ40_RS20135 (4145233) | 4145233..4145829 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| HUZ40_RS20140 (4146307) | 4146307..4146909 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| HUZ40_RS20145 (4148364) | 4148364..4149080 | + | 717 | WP_021534608.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HUZ40_RS20150 (4149100) | 4149100..4150206 | + | 1107 | WP_047663168.1 | N-acetylneuraminate epimerase | - |
| HUZ40_RS20155 (4150271) | 4150271..4151251 | + | 981 | WP_000379695.1 | sialate O-acetylesterase | - |
| HUZ40_RS20160 (4151259) | 4151259..4151363 | - | 105 | Protein_3952 | HNH endonuclease | - |
| HUZ40_RS20165 (4151463) | 4151463..4152335 | + | 873 | WP_047667708.1 | HNH endonuclease | - |
| HUZ40_RS20170 (4152398) | 4152398..4153708 | - | 1311 | WP_001701898.1 | McrC family protein | - |
| HUZ40_RS20175 (4153705) | 4153705..4155759 | - | 2055 | WP_000249525.1 | McrB family protein | - |
| HUZ40_RS20185 (4157297) | 4157297..4158505 | + | 1209 | Protein_3957 | type I restriction-modification system subunit M | - |
| HUZ40_RS20190 (4158502) | 4158502..4159764 | + | 1263 | WP_001293045.1 | restriction endonuclease subunit S | - |
| HUZ40_RS20195 (4159886) | 4159886..4163002 | + | 3117 | WP_000149660.1 | HsdR family type I site-specific deoxyribonuclease | - |
| HUZ40_RS20200 (4163525) | 4163525..4163899 | - | 375 | WP_033805147.1 | TA system toxin CbtA family protein | Toxin Detail |
| HUZ40_RS20205 (4163938) | 4163938..4164303 | - | 366 | WP_033805146.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HUZ40_RS20210 (4164329) | 4164329..4164550 | - | 222 | WP_033805145.1 | DUF987 domain-containing protein | - |
| HUZ40_RS20215 (4164547) | 4164547..4165089 | - | 543 | WP_033805144.1 | DNA repair protein RadC | - |
| HUZ40_RS20220 (4165102) | 4165102..4165542 | - | 441 | WP_033805143.1 | antirestriction protein | - |
| HUZ40_RS20225 (4165573) | 4165573..4166394 | - | 822 | WP_047082063.1 | DUF932 domain-containing protein | - |
| HUZ40_RS20230 (4166496) | 4166496..4166726 | - | 231 | WP_033805141.1 | DUF905 domain-containing protein | - |
| HUZ40_RS20235 (4166798) | 4166798..4167247 | - | 450 | WP_033805140.1 | IrmA family protein | - |
| HUZ40_RS20240 (4167244) | 4167244..4167696 | - | 453 | WP_033805139.1 | hypothetical protein | - |
| HUZ40_RS20245 (4167733) | 4167733..4168302 | - | 570 | WP_033805138.1 | hypothetical protein | - |
| HUZ40_RS20250 (4168302) | 4168302..4169006 | - | 705 | WP_239637851.1 | WYL domain-containing protein | - |
| HUZ40_RS20255 (4169206) | 4169206..4170081 | - | 876 | WP_033805136.1 | GTPase family protein | - |
| HUZ40_RS20260 (4170182) | 4170182..4171096 | - | 915 | WP_225303835.1 | hypothetical protein | - |
| HUZ40_RS20265 (4171598) | 4171598..4171804 | + | 207 | WP_033805135.1 | AlpA family transcriptional regulator | - |
| HUZ40_RS20270 (4171901) | 4171901..4172494 | + | 594 | WP_033805134.1 | hypothetical protein | - |
| HUZ40_RS20275 (4172691) | 4172691..4173266 | + | 576 | WP_033805133.1 | inovirus-type Gp2 protein | - |
| HUZ40_RS20280 (4173438) | 4173438..4173755 | + | 318 | WP_045133805.1 | putative zinc ribbon protein | - |
| HUZ40_RS20285 (4174055) | 4174055..4174417 | + | 363 | WP_000859002.1 | 6-carboxytetrahydropterin synthase QueD | - |
| HUZ40_RS20290 (4174474) | 4174474..4176729 | - | 2256 | WP_001083255.1 | protein DpdD | - |
| HUZ40_RS20295 (4176726) | 4176726..4177268 | - | 543 | WP_001097549.1 | phospholipase D-like domain-containing protein DpdK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|