MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 46569 bp
Accession: NZ_CP055185 Location: 1..46569 Organism: Shigella flexneri strain STEFF_16 Replicon: plasmid unnamed1
Accession: NZ_CP055185 Location: 1..46569 Organism: Shigella flexneri strain STEFF_16 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ44_RS22785 (HUZ44_22645) | 9..332 | - | 324 | WP_001181903.1 | hypothetical protein | - |
| HUZ44_RS22790 (HUZ44_22650) | 478..759 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HUZ44_RS22795 (HUZ44_22655) | 749..1000 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| HUZ44_RS22800 (HUZ44_22660) | 2256..3092 | + | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| HUZ44_RS22805 (HUZ44_22665) | 3132..3578 | + | 447 | WP_001074386.1 | hypothetical protein | - |
| HUZ44_RS22810 (HUZ44_22675) | 3715..4068 | + | 354 | WP_000876434.1 | DNA distortion polypeptide 3 | - |
| HUZ44_RS22815 (HUZ44_22680) | 4128..5096 | - | 969 | WP_077249520.1 | IS5 family transposase IS903B | Transposase |
| HUZ44_RS22820 (HUZ44_22685) | 5098..5391 | - | 294 | WP_015060510.1 | hypothetical protein | - |
| HUZ44_RS22825 (HUZ44_22690) | 5407..5637 | - | 231 | WP_000051064.1 | plasmid partition protein ParG | - |
| HUZ44_RS22830 (HUZ44_22695) | 5689..6309 | - | 621 | WP_000864791.1 | ParA family protein | - |
| HUZ44_RS22835 (HUZ44_22700) | 6595..7233 | + | 639 | WP_038976852.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HUZ44_RS22840 (HUZ44_22705) | 7632..8492 | - | 861 | WP_038976851.1 | Beta-lactamase TEM | ARG |
| HUZ44_RS22845 (HUZ44_22710) | 8767..9471 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUZ44_RS22850 (HUZ44_22715) | 9638..10273 | + | 636 | WP_001253263.1 | DUF3363 domain-containing protein | - |
| HUZ44_RS22855 (HUZ44_22720) | 10490..11704 | + | 1215 | WP_038977101.1 | Bicyclomycin resistance protein | ARG |
| HUZ44_RS22860 (HUZ44_22725) | 11732..12037 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| HUZ44_RS22865 (HUZ44_22730) | 12149..12337 | + | 189 | Protein_16 | IS91 family transposase | - |
| HUZ44_RS22870 (HUZ44_22735) | 12304..13503 | - | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| HUZ44_RS22875 (HUZ44_22740) | 13609..14259 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HUZ44_RS22880 (HUZ44_22745) | 14291..14533 | - | 243 | WP_000844627.1 | transposase | - |
| HUZ44_RS22885 (HUZ44_22750) | 14591..15409 | - | 819 | Protein_20 | Tn3 family transposase | - |
| HUZ44_RS22890 (HUZ44_22755) | 15470..16174 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ44_RS22895 (HUZ44_22760) | 16227..16385 | - | 159 | Protein_22 | IS3 family transposase ISAs17 | Transposase |
| HUZ44_RS22900 (HUZ44_22765) | 16780..17436 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| HUZ44_RS22905 (HUZ44_22770) | 17755..18174 | - | 420 | Protein_24 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| HUZ44_RS22910 (HUZ44_22775) | 18226..18930 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUZ44_RS22915 (HUZ44_22780) | 19177..19650 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| HUZ44_RS22920 (HUZ44_22785) | 19806..20918 | + | 1113 | WP_024166810.1 | IS91 family transposase ISAzo26 | Transposase |
| HUZ44_RS22925 (HUZ44_22790) | 20864..21568 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ44_RS22930 (HUZ44_22795) | 21636..22934 | + | 1299 | Protein_29 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HUZ44_RS22935 (HUZ44_22800) | 23089..23493 | - | 405 | WP_000059893.1 | hypothetical protein | - |
| HUZ44_RS22940 (HUZ44_22805) | 23556..24005 | - | 450 | WP_001282381.1 | H-NS family nucleoid-associated regulatory protein | - |
| HUZ44_RS22945 (HUZ44_22810) | 24017..26341 | - | 2325 | WP_001235773.1 | type IA DNA topoisomerase | - |
| HUZ44_RS22950 (HUZ44_22815) | 26361..26606 | - | 246 | WP_001243650.1 | hypothetical protein | - |
| HUZ44_RS22955 | 27021..27107 | - | 87 | Protein_34 | micrococcal nuclease | - |
| HUZ44_RS22960 (HUZ44_22825) | 27254..28162 | + | 909 | WP_239606674.1 | C45 family peptidase | - |
| HUZ44_RS22965 (HUZ44_22830) | 28316..29131 | - | 816 | WP_000018321.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HUZ44_RS22970 | 29374..29706 | - | 333 | WP_000699980.1 | hypothetical protein | - |
| HUZ44_RS22975 (HUZ44_22840) | 29709..30104 | - | 396 | WP_000733627.1 | cag pathogenicity island Cag12 family protein | - |
| HUZ44_RS22980 (HUZ44_22845) | 30101..31936 | - | 1836 | WP_000053826.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HUZ44_RS22985 (HUZ44_22850) | 31941..32978 | - | 1038 | WP_000217791.1 | Type IV secretion system protein PtlH | VF |
| HUZ44_RS22990 (HUZ44_22855) | 32996..34210 | - | 1215 | WP_001295061.1 | Type IV secretion system protein virB10 | VF |
| HUZ44_RS22995 (HUZ44_22860) | 34207..35136 | - | 930 | WP_000776689.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| HUZ44_RS23000 (HUZ44_22865) | 35142..35864 | - | 723 | WP_000394570.1 | Type IV secretion system protein PtlE | VF |
| HUZ44_RS23005 (HUZ44_22870) | 36054..37109 | - | 1056 | WP_000235774.1 | type IV secretion system protein | - |
| HUZ44_RS23010 (HUZ44_22875) | 37121..37381 | - | 261 | WP_001228869.1 | EexN family lipoprotein | - |
| HUZ44_RS23015 (HUZ44_22880) | 37391..38128 | - | 738 | WP_000737859.1 | type IV secretion system protein | - |
| HUZ44_RS23020 (HUZ44_22885) | 38130..40889 | - | 2760 | WP_000108725.1 | Type IV secretion system protein virB4 | VF |
| HUZ44_RS23025 (HUZ44_22890) | 40913..41203 | - | 291 | WP_000921916.1 | TrbC/VirB2 family protein | - |
| HUZ44_RS23030 (HUZ44_22895) | 41187..41831 | - | 645 | WP_000953539.1 | Type IV secretion system protein virB1 | VF |
| HUZ44_RS23035 (HUZ44_22900) | 42056..42547 | - | 492 | WP_038976853.1 | transcription termination/antitermination NusG family protein | - |
| HUZ44_RS23040 (HUZ44_22905) | 42908..44065 | - | 1158 | WP_000538023.1 | DNA distortion polypeptide 2 | - |
| HUZ44_RS23045 (HUZ44_22910) | 44068..44613 | - | 546 | WP_038976855.1 | DNA distortion polypeptide 1 | - |
| HUZ44_RS23050 (HUZ44_22915) | 44940..45212 | - | 273 | WP_000160399.1 | hypothetical protein | - |
| HUZ44_RS23055 (HUZ44_22920) | 45225..45374 | - | 150 | WP_000003880.1 | hypothetical protein | - |
| HUZ44_RS23060 (HUZ44_22925) | 45661..45990 | - | 330 | WP_000866648.1 | hypothetical protein | - |
| HUZ44_RS23065 (HUZ44_22930) | 46083..46298 | - | 216 | WP_001180116.1 | hypothetical protein | - |
| HUZ44_RS23070 (HUZ44_22935) | 46288..46533 | - | 246 | WP_000356546.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|