MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 35925 bp
Accession: NZ_CP055183 Location: 1..35925 Organism: Shigella flexneri strain STEFF_17 Replicon: plasmid unnamed2
Accession: NZ_CP055183 Location: 1..35925 Organism: Shigella flexneri strain STEFF_17 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ45_RS22995 (HUZ45_22855) | 151..795 | + | 645 | WP_000953539.1 | Type IV secretion system protein virB1 | VF |
| HUZ45_RS23000 (HUZ45_22860) | 779..1069 | + | 291 | WP_000921916.1 | TrbC/VirB2 family protein | - |
| HUZ45_RS23005 (HUZ45_22865) | 1093..3852 | + | 2760 | WP_000108725.1 | Type IV secretion system protein virB4 | VF |
| HUZ45_RS23010 (HUZ45_22870) | 3854..4591 | + | 738 | WP_000737859.1 | type IV secretion system protein | - |
| HUZ45_RS23015 (HUZ45_22875) | 4601..4861 | + | 261 | WP_001228869.1 | EexN family lipoprotein | - |
| HUZ45_RS23020 (HUZ45_22880) | 4873..5928 | + | 1056 | WP_000235774.1 | type IV secretion system protein | - |
| HUZ45_RS23025 (HUZ45_22885) | 6118..6840 | + | 723 | WP_000394570.1 | Type IV secretion system protein PtlE | VF |
| HUZ45_RS23030 (HUZ45_22890) | 6846..7775 | + | 930 | WP_000776689.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| HUZ45_RS23035 (HUZ45_22895) | 7772..8986 | + | 1215 | WP_001295061.1 | Type IV secretion system protein virB10 | VF |
| HUZ45_RS23040 (HUZ45_22900) | 9004..10041 | + | 1038 | WP_000217791.1 | Type IV secretion system protein PtlH | VF |
| HUZ45_RS23045 (HUZ45_22905) | 10046..11881 | + | 1836 | WP_000053826.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HUZ45_RS23050 (HUZ45_22910) | 11878..12273 | + | 396 | WP_000733627.1 | cag pathogenicity island Cag12 family protein | - |
| HUZ45_RS23055 | 12276..12608 | + | 333 | WP_000699980.1 | hypothetical protein | - |
| HUZ45_RS23060 (HUZ45_22920) | 12851..13666 | + | 816 | WP_000018321.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HUZ45_RS23065 (HUZ45_22925) | 13820..14731 | - | 912 | Protein_14 | C45 family autoproteolytic acyltransferase/hydolase | - |
| HUZ45_RS23070 | 14875..14961 | + | 87 | Protein_15 | micrococcal nuclease | - |
| HUZ45_RS23075 (HUZ45_22935) | 15376..15621 | + | 246 | WP_001243650.1 | hypothetical protein | - |
| HUZ45_RS23080 (HUZ45_22940) | 15641..17965 | + | 2325 | WP_001235773.1 | type IA DNA topoisomerase | - |
| HUZ45_RS23085 (HUZ45_22945) | 17977..18426 | + | 450 | WP_001282381.1 | H-NS family nucleoid-associated regulatory protein | - |
| HUZ45_RS23090 (HUZ45_22950) | 18489..18893 | + | 405 | WP_000059893.1 | hypothetical protein | - |
| HUZ45_RS23095 (HUZ45_22955) | 19048..20346 | - | 1299 | Protein_20 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HUZ45_RS23100 (HUZ45_22960) | 20414..21118 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ45_RS23105 (HUZ45_22965) | 21171..21329 | - | 159 | Protein_22 | IS3 family transposase ISAs17 | Transposase |
| HUZ45_RS23110 (HUZ45_22970) | 21724..22380 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| HUZ45_RS23115 (HUZ45_22975) | 22699..23118 | - | 420 | Protein_24 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| HUZ45_RS23120 (HUZ45_22980) | 23170..23874 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUZ45_RS23125 (HUZ45_22985) | 24105..24743 | - | 639 | WP_038976852.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HUZ45_RS23130 (HUZ45_22990) | 25029..25649 | + | 621 | WP_000864791.1 | ParA family protein | - |
| HUZ45_RS23135 (HUZ45_22995) | 25701..25931 | + | 231 | WP_000051064.1 | plasmid partition protein ParG | - |
| HUZ45_RS23140 (HUZ45_23000) | 25947..26240 | + | 294 | WP_015060510.1 | hypothetical protein | - |
| HUZ45_RS23145 (HUZ45_23005) | 26242..27210 | + | 969 | WP_077249520.1 | IS5 family transposase IS903B | Transposase |
| HUZ45_RS23150 (HUZ45_23010) | 27270..27623 | - | 354 | WP_000876434.1 | DNA distortion polypeptide 3 | - |
| HUZ45_RS23155 (HUZ45_23020) | 27760..28206 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| HUZ45_RS23160 (HUZ45_23025) | 28246..29082 | - | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| HUZ45_RS23165 (HUZ45_23030) | 30338..30589 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| HUZ45_RS23170 (HUZ45_23035) | 30579..30860 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HUZ45_RS23175 (HUZ45_23040) | 31006..31329 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| HUZ45_RS23180 (HUZ45_23045) | 31374..31619 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| HUZ45_RS23185 (HUZ45_23050) | 31609..31824 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| HUZ45_RS23190 (HUZ45_23055) | 31917..32246 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| HUZ45_RS23195 (HUZ45_23060) | 32533..32682 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| HUZ45_RS23200 (HUZ45_23065) | 32695..32967 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| HUZ45_RS23205 (HUZ45_23070) | 33294..33839 | + | 546 | WP_038976855.1 | DNA distortion polypeptide 1 | - |
| HUZ45_RS23210 (HUZ45_23075) | 33842..34999 | + | 1158 | WP_000538023.1 | DNA distortion polypeptide 2 | - |
| HUZ45_RS23215 (HUZ45_23080) | 35360..35851 | + | 492 | WP_000872475.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|