MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP055181 Location: 4139387..4148738 Organism: Shigella flexneri strain STEFF_17 Replicon: chromosome
Accession: NZ_CP055181 Location: 4139387..4148738 Organism: Shigella flexneri strain STEFF_17 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ45_RS20075 (4134548) | 4134548..4135849 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| HUZ45_RS20080 (4135965) | 4135965..4136303 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| HUZ45_RS20085 (4136279) | 4136279..4137976 | + | 1698 | WP_000068928.1 | protein-disulfide reductase DsbD | - |
| HUZ45_RS20090 (4138013) | 4138013..4138588 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| HUZ45_RS20100 (4139387) | 4139387..4140925 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HUZ45_RS20105 (4141291) | 4141291..4142625 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HUZ45_RS20110 (4142705) | 4142705..4144852 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| HUZ45_RS20115 (4144911) | 4144911..4146368 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| HUZ45_RS20120 (4146605) | 4146605..4148122 | + | 1518 | WP_001295090.1 | lysine--tRNA ligase | - |
| HUZ45_RS20125 (4148241) | 4148241..4148414 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HUZ45_RS20130 (4148442) | 4148442..4148738 | - | 297 | WP_001600874.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HUZ45_RS20135 (4148965) | 4148965..4149237 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| HUZ45_RS20140 (4149249) | 4149249..4149479 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| HUZ45_RS20145 (4149660) | 4149660..4151291 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| HUZ45_RS20150 (4151288) | 4151288..4152007 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|