MGE detailed information
MGE type: Genomic_island MGE length: 12943 bp
Accession: NZ_CP055179 Location: 641210..654152 Organism: Shigella flexneri strain STEFF_18 Replicon: chromosome
Accession: NZ_CP055179 Location: 641210..654152 Organism: Shigella flexneri strain STEFF_18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ46_RS03090 (636211) | 636211..636645 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| HUZ46_RS03095 (636663) | 636663..637541 | - | 879 | WP_001298758.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| HUZ46_RS03100 (637531) | 637531..638310 | - | 780 | WP_063625504.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| HUZ46_RS03105 (638321) | 638321..638794 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| HUZ46_RS03110 (638817) | 638817..640097 | - | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| HUZ46_RS03115 (640346) | 640346..641155 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| HUZ46_RS03120 (641210) | 641210..641674 | - | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HUZ46_RS03125 (641674) | 641674..642009 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| HUZ46_RS03130 (642158) | 642158..643729 | - | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| HUZ46_RS03135 (644104) | 644104..645438 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HUZ46_RS03140 (645454) | 645454..646224 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HUZ46_RS03145 (646254) | 646254..647144 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HUZ46_RS03150 (647241) | 647241..648386 | + | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| HUZ46_RS03160 (649352) | 649352..650350 | - | 999 | WP_239612941.1 | IS110 family transposase IS621 | Transposase |
| HUZ46_RS03165 (650688) | 650688..651864 | - | 1177 | Protein_619 | YhaC family protein | - |
| HUZ46_RS03170 (651886) | 651886..652425 | - | 540 | WP_000675746.1 | protein YhaB | - |
| HUZ46_RS03175 (652681) | 652681..652899 | - | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| HUZ46_RS03180 (653214) | 653214..654152 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| HUZ46_RS03185 (654251) | 654251..655240 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HUZ46_RS03190 (655262) | 655262..656593 | + | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| HUZ46_RS03195 (656619) | 656619..657827 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|