MGE detailed information
MGE type: Genomic_island MGE length: 11675 bp
Accession: NZ_CP055170 Location: 3946334..3958008 Organism: Shigella flexneri strain STEFF_22 Replicon: chromosome
Accession: NZ_CP055170 Location: 3946334..3958008 Organism: Shigella flexneri strain STEFF_22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ49_RS18905 (3942659) | 3942659..3943867 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| HUZ49_RS18910 (3943893) | 3943893..3945224 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| HUZ49_RS18915 (3945246) | 3945246..3946235 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HUZ49_RS18920 (3946334) | 3946334..3947272 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| HUZ49_RS18925 (3947587) | 3947587..3947805 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| HUZ49_RS18930 (3948061) | 3948061..3948600 | + | 540 | WP_000675745.1 | protein YhaB | - |
| HUZ49_RS18935 (3948622) | 3948622..3949809 | + | 1188 | WP_001676773.1 | YhaC family protein | - |
| HUZ49_RS18945 (3950832) | 3950832..3951977 | - | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| HUZ49_RS18950 (3952074) | 3952074..3952964 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HUZ49_RS18955 (3952994) | 3952994..3953764 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HUZ49_RS18960 (3953780) | 3953780..3955114 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HUZ49_RS18965 (3955489) | 3955489..3957060 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| HUZ49_RS18970 (3957209) | 3957209..3957544 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| HUZ49_RS18975 (3957544) | 3957544..3958008 | + | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HUZ49_RS18980 (3958063) | 3958063..3958872 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| HUZ49_RS18985 (3959121) | 3959121..3960401 | + | 1281 | WP_000681910.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| HUZ49_RS18990 (3960424) | 3960424..3960897 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| HUZ49_RS18995 (3960908) | 3960908..3961687 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| HUZ49_RS19000 (3961677) | 3961677..3962555 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| HUZ49_RS19005 (3962573) | 3962573..3963007 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|