MGE detailed information
MGE type: Genomic_island MGE length: 76961 bp
Accession: NZ_CP055167 Location: 4162790..4239750 Organism: Shigella flexneri strain STEFF_24 Replicon: chromosome
Accession: NZ_CP055167 Location: 4162790..4239750 Organism: Shigella flexneri strain STEFF_24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ50_RS19995 (4158109) | 4158109..4159011 | - | 903 | WP_000832227.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| HUZ50_RS20000 (4159031) | 4159031..4159534 | - | 504 | WP_063625335.1 | type 1 fimbria minor subunit FimG | - |
| HUZ50_RS20005 (4159547) | 4159547..4160077 | - | 531 | WP_001469032.1 | type 1 fimbria minor subunit FimF | - |
| HUZ50_RS20010 (4160087) | 4160087..4162723 | - | 2637 | WP_063625336.1 | fimbrial usher FimD | - |
| HUZ50_RS20015 (4162790) | 4162790..4163515 | - | 726 | WP_063625337.1 | hypothetical protein | VF |
| HUZ50_RS20020 (4163552) | 4163552..4164091 | - | 540 | WP_000824119.1 | hypothetical protein | VF |
| HUZ50_RS20025 (4164156) | 4164156..4164704 | - | 549 | WP_000695543.1 | hypothetical protein | VF |
| HUZ50_RS20030 (4165185) | 4165185..4165781 | - | 597 | WP_000044711.1 | hypothetical protein | VF |
| HUZ50_RS20035 (4166259) | 4166259..4166861 | - | 603 | WP_000790583.1 | hypothetical protein | VF |
| HUZ50_RS20040 (4168313) | 4168313..4169029 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HUZ50_RS20045 (4169049) | 4169049..4170155 | + | 1107 | WP_063625156.1 | N-acetylneuraminate epimerase | - |
| HUZ50_RS20050 (4170220) | 4170220..4171200 | + | 981 | WP_063625155.1 | sialate O-acetylesterase | - |
| HUZ50_RS20055 (4171208) | 4171208..4171312 | - | 105 | Protein_3935 | HNH endonuclease | - |
| HUZ50_RS20060 (4171412) | 4171412..4172284 | + | 873 | WP_063625154.1 | HNH endonuclease | - |
| HUZ50_RS20065 (4172329) | 4172329..4172508 | + | 180 | Protein_3937 | peptidase | - |
| HUZ50_RS20070 (4172907) | 4172907..4174943 | - | 2037 | WP_239612939.1 | hypothetical protein | - |
| HUZ50_RS20075 (4175899) | 4175899..4176042 | - | 144 | Protein_3939 | hypothetical protein | - |
| HUZ50_RS20080 (4176127) | 4176127..4176324 | - | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| HUZ50_RS20085 (4176344) | 4176344..4176832 | - | 489 | WP_000761685.1 | DUF5983 family protein | - |
| HUZ50_RS20090 (4176829) | 4176829..4177206 | - | 378 | WP_072649755.1 | TA system toxin CbtA family protein | Toxin Detail |
| HUZ50_RS20095 (4177296) | 4177296..4177664 | - | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HUZ50_RS20100 (4177744) | 4177744..4177965 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| HUZ50_RS20105 (4178052) | 4178052..4178528 | - | 477 | WP_001384029.1 | RadC family protein | - |
| HUZ50_RS20110 (4178543) | 4178543..4179028 | - | 486 | WP_000213722.1 | antirestriction protein | - |
| HUZ50_RS20115 (4179120) | 4179120..4179938 | - | 819 | WP_001175175.1 | DUF932 domain-containing protein | - |
| HUZ50_RS20120 (4180028) | 4180028..4180237 | - | 210 | WP_032150870.1 | DUF905 family protein | - |
| HUZ50_RS20125 (4180267) | 4180267..4180944 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| HUZ50_RS20130 (4181092) | 4181092..4181772 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| HUZ50_RS20135 (4181975) | 4181975..4182859 | - | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| HUZ50_RS20140 (4183044) | 4183044..4184174 | + | 1131 | WP_072660960.1 | hypothetical protein | - |
| HUZ50_RS20145 (4185655) | 4185655..4186386 | + | 732 | WP_001075464.1 | inovirus Gp2 family protein | - |
| HUZ50_RS20150 (4186714) | 4186714..4187592 | + | 879 | WP_000769116.1 | restriction endonuclease | - |
| HUZ50_RS20155 (4187646) | 4187646..4188220 | + | 575 | Protein_3955 | transposase | - |
| HUZ50_RS20160 (4188353) | 4188353..4189128 | - | 776 | Protein_3956 | transposase | - |
| HUZ50_RS20165 (4189529) | 4189529..4190757 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| HUZ50_RS20170 (4190781) | 4190781..4191125 | + | 345 | WP_261785235.1 | H-NS family nucleoid-associated regulatory protein | - |
| HUZ50_RS20175 (4191394) | 4191394..4191522 | + | 129 | Protein_3959 | IS256 family transposase | - |
| HUZ50_RS20180 (4191552) | 4191552..4191901 | - | 350 | Protein_3960 | IS21 family transposase | - |
| HUZ50_RS20185 (4192934) | 4192934..4193500 | + | 567 | WP_053899658.1 | inovirus-type Gp2 protein | - |
| HUZ50_RS20190 (4193620) | 4193620..4193769 | - | 150 | WP_001421645.1 | hypothetical protein | - |
| HUZ50_RS20195 (4193784) | 4193784..4194356 | + | 573 | WP_032153703.1 | hypothetical protein | - |
| HUZ50_RS20200 (4194425) | 4194425..4194661 | + | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| HUZ50_RS20205 (4194954) | 4194954..4195130 | - | 177 | WP_001376097.1 | hypothetical protein | - |
| HUZ50_RS20210 (4195213) | 4195213..4195401 | - | 189 | WP_223603649.1 | hypothetical protein | - |
| HUZ50_RS20215 (4195497) | 4195497..4195745 | - | 249 | WP_001349534.1 | ProQ/FINO family protein | - |
| HUZ50_RS20220 (4195814) | 4195814..4196005 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| HUZ50_RS24440 (4196408) | 4196408..4197099 | - | 692 | Protein_3969 | IS1 family transposase | - |
| HUZ50_RS20240 (4197159) | 4197159..4197335 | + | 177 | Protein_3970 | transketolase family protein | - |
| HUZ50_RS20245 (4197589) | 4197589..4197702 | + | 114 | Protein_3971 | transposase | - |
| HUZ50_RS20250 (4198562) | 4198562..4199128 | + | 567 | WP_000919994.1 | hypothetical protein | - |
| HUZ50_RS20255 (4199369) | 4199369..4200184 | + | 816 | WP_001043260.1 | hypothetical protein | ARG |
| HUZ50_RS20260 (4200245) | 4200245..4201048 | + | 804 | WP_001082319.1 | hypothetical protein | ARG |
| HUZ50_RS20265 (4201048) | 4201048..4201884 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| HUZ50_RS20270 (4202190) | 4202190..4202432 | + | 243 | WP_000844627.1 | transposase | - |
| HUZ50_RS20275 (4202464) | 4202464..4203114 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HUZ50_RS20280 (4203220) | 4203220..4204419 | + | 1200 | WP_032153701.1 | hypothetical protein | ARG |
| HUZ50_RS20285 (4204386) | 4204386..4204574 | - | 189 | Protein_3979 | IS91 family transposase | - |
| HUZ50_RS20290 (4204686) | 4204686..4204991 | - | 306 | WP_001255015.1 | hypothetical protein | VF |
| HUZ50_RS20295 (4205019) | 4205019..4206233 | - | 1215 | WP_000214121.1 | hypothetical protein | ARG |
| HUZ50_RS20300 (4206450) | 4206450..4207334 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| HUZ50_RS20305 (4207365) | 4207365..4208021 | - | 657 | Protein_3983 | IS91-like element ISVsa3 family transposase | - |
| HUZ50_RS20310 (4207955) | 4207955..4208233 | - | 279 | WP_001349530.1 | hypothetical protein | VF |
| HUZ50_RS20315 (4208665) | 4208665..4208979 | + | 315 | WP_000930062.1 | hypothetical protein | VF |
| HUZ50_RS20320 (4209186) | 4209186..4209449 | + | 264 | Protein_3986 | hypothetical protein | VF |
| HUZ50_RS20325 (4209900) | 4209900..4211132 | - | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| HUZ50_RS20330 (4211283) | 4211283..4212444 | - | 1162 | Protein_3988 | IS3 family transposase IS3 | Transposase |
| HUZ50_RS20335 (4212612) | 4212612..4213592 | + | 981 | WP_000174035.1 | thymidylate synthase | - |
| HUZ50_RS20340 (4213589) | 4213589..4214533 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| HUZ50_RS20345 (4214536) | 4214536..4215618 | - | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| HUZ50_RS20350 (4216085) | 4216085..4216351 | + | 267 | WP_032153698.1 | MazG-like family protein | - |
| HUZ50_RS20355 (4216651) | 4216651..4217165 | - | 515 | Protein_3993 | ISL3 family transposase ISEc38 | Transposase |
| HUZ50_RS20360 (4217773) | 4217773..4221186 | + | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| HUZ50_RS20365 (4221250) | 4221250..4222884 | + | 1635 | WP_000627728.1 | class I SAM-dependent DNA methyltransferase | - |
| HUZ50_RS20370 (4222881) | 4222881..4224023 | + | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| HUZ50_RS20375 (4224032) | 4224032..4225654 | + | 1623 | WP_000778955.1 | AAA family ATPase | - |
| HUZ50_RS20380 (4225654) | 4225654..4226550 | + | 897 | WP_000499115.1 | hypothetical protein | - |
| HUZ50_RS20385 (4226773) | 4226773..4226951 | - | 179 | Protein_3999 | integrase | - |
| HUZ50_RS20390 (4227181) | 4227181..4227918 | + | 738 | WP_001398114.1 | OmpW family outer membrane protein | - |
| HUZ50_RS20395 (4228338) | 4228338..4229234 | + | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| HUZ50_RS20400 (4229283) | 4229283..4230362 | + | 1080 | WP_001207396.1 | hypothetical protein | - |
| HUZ50_RS20405 (4230409) | 4230409..4231980 | + | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| HUZ50_RS20410 (4231977) | 4231977..4232243 | + | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| HUZ50_RS20415 (4232383) | 4232383..4232580 | + | 198 | WP_001238004.1 | hypothetical protein | - |
| HUZ50_RS20420 (4232633) | 4232633..4234306 | + | 1674 | WP_025492097.1 | sulfatase-like hydrolase/transferase | - |
| HUZ50_RS20425 (4234450) | 4234450..4235484 | - | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| HUZ50_RS20430 (4235534) | 4235534..4236231 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| HUZ50_RS20435 (4236253) | 4236253..4239750 | - | 3498 | WP_089626119.1 | hypothetical protein | VF |
| HUZ50_RS20440 (4240335) | 4240335..4240580 | - | 246 | Protein_4010 | IS91 family transposase | - |
| HUZ50_RS20445 (4240642) | 4240642..4241877 | - | 1236 | Protein_4011 | IS3 family transposase | - |
| HUZ50_RS20450 (4241963) | 4241963..4242157 | + | 195 | Protein_4012 | transposase | - |
| HUZ50_RS20455 (4242253) | 4242253..4243530 | - | 1278 | WP_000610829.1 | ISL3 family transposase | - |
| HUZ50_RS20460 (4243543) | 4243543..4244577 | - | 1035 | WP_029396327.1 | permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|