MGE detailed information
MGE type: Genomic_island MGE length: 15902 bp
Accession: NZ_CP055092 Location: 3592762..3608663 Organism: Shigella flexneri strain SWHIN_110 Replicon: chromosome
Accession: NZ_CP055092 Location: 3592762..3608663 Organism: Shigella flexneri strain SWHIN_110 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| - (3588350) | 3588350..3588430 | - | 81 | NuclAT_11 | - | - |
| - (3588350) | 3588350..3588430 | - | 81 | NuclAT_11 | - | - |
| - (3588350) | 3588350..3588430 | - | 81 | NuclAT_11 | - | - |
| - (3588350) | 3588350..3588430 | - | 81 | NuclAT_11 | - | - |
| HUZ87_RS17370 (3589026) | 3589026..3589484 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| HUZ87_RS17375 (3589745) | 3589745..3591202 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| HUZ87_RS17380 (3591259) | 3591259..3591780 | - | 522 | Protein_3409 | peptide chain release factor H | - |
| HUZ87_RS17385 (3591776) | 3591776..3591982 | - | 207 | Protein_3410 | RtcB family protein | - |
| HUZ87_RS17390 (3592300) | 3592300..3592752 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| HUZ87_RS17395 (3592762) | 3592762..3593160 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| HUZ87_RS17400 (3593163) | 3593163..3593456 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HUZ87_RS17405 (3593508) | 3593508..3594563 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| HUZ87_RS17410 (3594634) | 3594634..3595419 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| HUZ87_RS17415 (3595391) | 3595391..3597103 | + | 1713 | Protein_3416 | hypothetical protein | VF |
| HUZ87_RS17420 (3597327) | 3597327..3597824 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| HUZ87_RS17425 (3598000) | 3598000..3598749 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| HUZ87_RS17430 (3598959) | 3598959..3599219 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| HUZ87_RS17435 (3599222) | 3599222..3599500 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| HUZ87_RS17440 (3599656) | 3599656..3600396 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| HUZ87_RS17445 (3600367) | 3600367..3601134 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| HUZ87_RS17450 (3601340) | 3601340..3601918 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| HUZ87_RS17455 (3602158) | 3602158..3604602 | + | 2445 | WP_000973083.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| HUZ87_RS17460 (3604645) | 3604645..3605091 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| HUZ87_RS17465 (3605272) | 3605272..3606042 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| HUZ87_RS17470 (3606083) | 3606083..3607219 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| HUZ87_RS17475 (3607650) | 3607650..3607871 | - | 222 | WP_001393660.1 | hypothetical protein | - |
| HUZ87_RS17480 (3607966) | 3607966..3608663 | + | 698 | WP_223216367.1 | IS1 family transposase | - |
| HUZ87_RS17485 (3608796) | 3608796..3613028 | - | 4233 | WP_000508724.1 | RHS element core protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|