MGE detailed information
MGE type: Genomic_island MGE length: 52857 bp
Accession: NZ_CP055092 Location: 1802171..1855027 Organism: Shigella flexneri strain SWHIN_110 Replicon: chromosome
Accession: NZ_CP055092 Location: 1802171..1855027 Organism: Shigella flexneri strain SWHIN_110 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ87_RS08575 (1798321) | 1798321..1798794 | + | 474 | WP_001105393.1 | DNA gyrase inhibitor SbmC | - |
| HUZ87_RS08580 (1798992) | 1798992..1800050 | + | 1059 | WP_001200905.1 | FUSC family protein | - |
| HUZ87_RS08585 (1800222) | 1800222..1800551 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| HUZ87_RS08590 (1800652) | 1800652..1800918 | - | 267 | WP_087757644.1 | EutP/PduV family microcompartment system protein | - |
| HUZ87_RS08595 (1801288) | 1801288..1801677 | - | 390 | WP_001445118.1 | IS110 family transposase | - |
| HUZ87_RS08600 (1801866) | 1801866..1802090 | - | 225 | Protein_1687 | transposase | - |
| HUZ87_RS08605 (1802171) | 1802171..1802575 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| HUZ87_RS08610 (1802572) | 1802572..1802919 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| HUZ87_RS08615 (1802968) | 1802968..1804507 | + | 1540 | Protein_1690 | IS66 family transposase ISEc22 | Transposase |
| HUZ87_RS08620 (1804938) | 1804938..1805018 | - | 81 | Protein_1691 | hypothetical protein | - |
| HUZ87_RS08625 (1805118) | 1805118..1805266 | - | 149 | Protein_1692 | DUF5983 family protein | - |
| HUZ87_RS08630 (1805263) | 1805263..1805640 | - | 378 | WP_000854761.1 | TA system toxin CbtA family protein | Toxin Detail |
| HUZ87_RS08635 (1805730) | 1805730..1806098 | - | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HUZ87_RS08640 (1806261) | 1806261..1806482 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| HUZ87_RS08645 (1806545) | 1806545..1807021 | - | 477 | WP_001186711.1 | RadC family protein | - |
| HUZ87_RS08650 (1807036) | 1807036..1807509 | - | 474 | WP_000855059.1 | antirestriction protein | - |
| HUZ87_RS08655 (1807851) | 1807851..1808669 | - | 819 | WP_046464190.1 | DUF932 domain-containing protein | - |
| HUZ87_RS08660 (1808787) | 1808787..1808982 | - | 196 | Protein_1699 | DUF905 family protein | - |
| HUZ87_RS08665 (1809053) | 1809053..1811899 | - | 2847 | WP_046464191.1 | Ag43/Cah family autotransporter adhesin | - |
| HUZ87_RS08670 (1812271) | 1812271..1813143 | - | 873 | WP_001352361.1 | GTPase family protein | - |
| HUZ87_RS08675 (1813228) | 1813228..1814145 | - | 918 | WP_000250235.1 | hypothetical protein | - |
| HUZ87_RS08680 (1815345) | 1815345..1815947 | - | 603 | WP_000813456.1 | hypothetical protein | - |
| HUZ87_RS08685 (1816042) | 1816042..1816248 | - | 207 | WP_000235225.1 | AlpA family transcriptional regulator | - |
| HUZ87_RS08690 (1816389) | 1816389..1816655 | + | 267 | WP_000840364.1 | hypothetical protein | - |
| HUZ87_RS08695 (1817007) | 1817007..1817132 | + | 126 | Protein_1706 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| HUZ87_RS08700 (1817478) | 1817478..1817678 | - | 201 | WP_001297219.1 | hypothetical protein | - |
| HUZ87_RS08705 (1817877) | 1817877..1818446 | + | 570 | WP_000221554.1 | inovirus Gp2 family protein | - |
| HUZ87_RS08710 (1818612) | 1818612..1819004 | + | 393 | WP_001352248.1 | putative zinc ribbon protein | - |
| HUZ87_RS08715 (1819014) | 1819014..1819982 | - | 969 | Protein_1710 | IS110 family transposase | - |
| HUZ87_RS08720 (1820167) | 1820167..1820571 | + | 405 | WP_001221631.1 | zinc-ribbon domain-containing protein | - |
| HUZ87_RS08725 (1820862) | 1820862..1821524 | + | 663 | Protein_1712 | ISL3 family transposase | - |
| HUZ87_RS08730 (1821588) | 1821588..1821848 | + | 261 | Protein_1713 | IS3 family transposase ISSfl10 | Transposase |
| HUZ87_RS08735 (1821858) | 1821858..1823009 | - | 1152 | WP_024176387.1 | IS30 family transposase IS30D | Transposase |
| HUZ87_RS08740 (1823074) | 1823074..1823322 | - | 249 | Protein_1715 | IS3 family transposase ISEhe3 | Transposase |
| HUZ87_RS08745 (1823898) | 1823898..1824071 | + | 174 | Protein_1716 | IS4 family transposase | - |
| HUZ87_RS08750 (1824050) | 1824050..1824223 | + | 174 | Protein_1717 | cobalamin biosynthesis protein | - |
| HUZ87_RS08755 (1824375) | 1824375..1824920 | + | 546 | WP_000973197.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| HUZ87_RS08760 (1824917) | 1824917..1825660 | + | 744 | WP_001352249.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| HUZ87_RS08765 (1825672) | 1825672..1826751 | + | 1080 | WP_001166154.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| HUZ87_RS08770 (1826813) | 1826813..1827748 | + | 936 | WP_000986349.1 | L,D-transpeptidase | - |
| HUZ87_RS08780 (1828206) | 1828206..1829123 | + | 918 | WP_001011462.1 | nitrogen assimilation transcriptional regulator NAC | - |
| HUZ87_RS08785 (1829225) | 1829225..1830175 | + | 951 | WP_001011023.1 | HTH-type transcriptional regulator Cbl | - |
| HUZ87_RS08795 (1830293) | 1830293..1831936 | + | 1644 | Protein_1724 | toxic metabolite efflux MATE transporter YeeO | - |
| HUZ87_RS08805 (1832440) | 1832440..1833137 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| HUZ87_RS08810 (1833343) | 1833343..1834059 | - | 717 | WP_000532923.1 | transcriptional regulatory protein YeeN | VF |
| HUZ87_RS08815 (1834402) | 1834402..1835856 | - | 1455 | WP_001060247.1 | AMP nucleosidase | - |
| HUZ87_RS08820 (1835958) | 1835958..1837274 | - | 1317 | WP_000378595.1 | shikimate transporter | - |
| HUZ87_RS08825 (1837589) | 1837589..1838641 | + | 1053 | WP_001532986.1 | glycosyltransferase family 9 protein | - |
| HUZ87_RS08830 (1838903) | 1838903..1845232 | - | 6330 | Protein_1730 | Ig-like domain-containing protein | - |
| HUZ87_RS08835 (1845330) | 1845330..1846391 | - | 1062 | Protein_1731 | hypothetical protein | VF |
| HUZ87_RS08840 (1846355) | 1846355..1846885 | - | 531 | WP_001479393.1 | hypothetical protein | VF |
| HUZ87_RS08850 (1847373) | 1847373..1848170 | - | 798 | WP_001474389.1 | DgsA anti-repressor MtfA | - |
| HUZ87_RS08860 (1848923) | 1848923..1849453 | - | 531 | WP_001079074.1 | cytochrome b | - |
| HUZ87_RS08865 (1849796) | 1849796..1850446 | - | 651 | WP_046464212.1 | metal-binding protein ZinT | - |
| HUZ87_RS08870 (1850703) | 1850703..1851338 | - | 636 | WP_001240102.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| HUZ87_RS08875 (1851339) | 1851339..1852343 | - | 1005 | WP_000740094.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| HUZ87_RS08880 (1852452) | 1852452..1852865 | - | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| HUZ87_RS08885 (1852998) | 1852998..1853669 | + | 672 | WP_001339045.1 | Sensor histidine kinase RcsC | VF |
| HUZ87_RS08890 (1853669) | 1853669..1855027 | + | 1359 | WP_000826748.1 | two-component system sensor histidine kinase HprS | - |
| HUZ87_RS08895 (1855135) | 1855135..1855986 | - | 852 | WP_000218212.1 | protein deglycase HchA | - |
| HUZ87_RS08900 (1856578) | 1856578..1857771 | - | 1194 | WP_001475434.1 | porin OmpC | - |
| HUZ87_RS08905 (1858422) | 1858422..1858703 | + | 282 | WP_001297704.1 | cell division protein DrpB | - |
| HUZ87_RS08910 (1858743) | 1858743..1859438 | + | 696 | WP_000365562.1 | phosphohydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|