MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 80984 bp
Accession: NZ_CP055091 Location: 1..80984 Organism: Citrobacter portucalensis strain SWHIN_111 Replicon: plasmid unnamed2
Accession: NZ_CP055091 Location: 1..80984 Organism: Citrobacter portucalensis strain SWHIN_111 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ88_RS25025 (HUZ88_24955) | 1042..2217 | - | 1176 | WP_239606585.1 | MFS transporter | - |
| HUZ88_RS25030 (HUZ88_24960) | 2775..3695 | - | 921 | WP_113415726.1 | hypothetical protein | - |
| HUZ88_RS25035 (HUZ88_24965) | 4396..4614 | + | 219 | WP_032934863.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HUZ88_RS25040 (HUZ88_24970) | 4616..4921 | + | 306 | WP_008322213.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HUZ88_RS25045 (HUZ88_24975) | 4923..5237 | + | 315 | WP_008322211.1 | hypothetical protein | - |
| HUZ88_RS25050 (HUZ88_24980) | 5227..6018 | + | 792 | WP_008322208.1 | site-specific integrase | - |
| HUZ88_RS25055 (HUZ88_24985) | 6217..7584 | - | 1368 | WP_008322207.1 | GntP family transporter | - |
| HUZ88_RS25060 (HUZ88_24990) | 7670..8446 | - | 777 | WP_008322204.1 | HPr family phosphocarrier protein | - |
| HUZ88_RS25065 (HUZ88_24995) | 8451..9089 | - | 639 | WP_008322203.1 | aldolase | - |
| HUZ88_RS25070 (HUZ88_25000) | 9086..10348 | - | 1263 | WP_239606586.1 | four-carbon acid sugar kinase family protein | - |
| HUZ88_RS25075 (HUZ88_25005) | 10345..11253 | - | 909 | WP_239606587.1 | NAD(P)-dependent oxidoreductase | - |
| HUZ88_RS25080 (HUZ88_25010) | 11447..12241 | + | 795 | WP_008322197.1 | DNA-binding transcriptional repressor YgbI | - |
| HUZ88_RS25085 (HUZ88_25015) | 12328..13266 | - | 939 | WP_008322195.1 | Recombination-promoting nuclease RpnA | VF |
| HUZ88_RS25090 (HUZ88_25020) | 13303..13656 | - | 354 | WP_224770005.1 | hypothetical protein | - |
| HUZ88_RS25095 (HUZ88_25025) | 13646..13993 | - | 348 | WP_106108091.1 | hypothetical protein | - |
| HUZ88_RS25100 (HUZ88_25030) | 14031..14672 | - | 642 | WP_000497473.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HUZ88_RS25105 (HUZ88_25035) | 15095..15598 | + | 504 | WP_071446649.1 | peptidase M14 | - |
| HUZ88_RS25110 (HUZ88_25040) | 15735..16127 | + | 393 | WP_071446650.1 | hypothetical protein | - |
| HUZ88_RS25115 (HUZ88_25045) | 16203..16421 | - | 219 | WP_071446651.1 | hypothetical protein | - |
| HUZ88_RS25120 (HUZ88_25050) | 16828..17694 | + | 867 | WP_071446652.1 | AAA family ATPase | - |
| HUZ88_RS25125 (HUZ88_25055) | 17694..18725 | + | 1032 | WP_071446653.1 | ParB/RepB/Spo0J family partition protein | - |
| HUZ88_RS25130 (HUZ88_25060) | 18725..19162 | + | 438 | WP_071446654.1 | hypothetical protein | - |
| HUZ88_RS25135 (HUZ88_25065) | 19159..19482 | + | 324 | WP_071446655.1 | hypothetical protein | - |
| HUZ88_RS25140 (HUZ88_25070) | 19654..20907 | + | 1254 | WP_224776425.1 | RES family NAD+ phosphorylase | - |
| HUZ88_RS25145 (HUZ88_25075) | 20956..22230 | - | 1275 | WP_071687509.1 | Y-family DNA polymerase | - |
| HUZ88_RS25150 (HUZ88_25080) | 22230..22652 | - | 423 | WP_045911947.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HUZ88_RS25155 (HUZ88_25085) | 23193..24128 | + | 936 | WP_071446536.1 | DUF1281 domain-containing protein | - |
| HUZ88_RS25160 (HUZ88_25090) | 24161..24508 | + | 348 | WP_071446535.1 | hypothetical protein | - |
| HUZ88_RS25165 (HUZ88_25095) | 24885..25565 | + | 681 | WP_239606588.1 | DNA methylase | - |
| HUZ88_RS25170 (HUZ88_25100) | 25565..25786 | + | 222 | WP_071446533.1 | hypothetical protein | - |
| HUZ88_RS25175 (HUZ88_25105) | 25797..26216 | + | 420 | WP_071446532.1 | DUF1380 family protein | - |
| HUZ88_RS25180 (HUZ88_25110) | 26272..26676 | + | 405 | WP_071446531.1 | DUF1380 family protein | - |
| HUZ88_RS25185 (HUZ88_25115) | 26744..27511 | + | 768 | WP_071446530.1 | hypothetical protein | - |
| HUZ88_RS25190 (HUZ88_25120) | 27727..28350 | + | 624 | Protein_34 | hypothetical protein | - |
| HUZ88_RS25195 (HUZ88_25125) | 28393..28827 | + | 435 | WP_114141097.1 | conjugation system SOS inhibitor PsiB | - |
| HUZ88_RS25200 (HUZ88_25130) | 28824..29552 | + | 729 | WP_071687496.1 | plasmid SOS inhibition protein A | - |
| HUZ88_RS25205 (HUZ88_25135) | 29549..29875 | + | 327 | WP_071698816.1 | theronine dehydrogenase | - |
| HUZ88_RS25210 (HUZ88_25140) | 29986..30441 | + | 456 | WP_131341794.1 | conjugation system SOS inhibitor PsiB family protein | - |
| HUZ88_RS25215 (HUZ88_25145) | 30457..30738 | - | 282 | WP_127702263.1 | hypothetical protein | - |
| HUZ88_RS25220 (HUZ88_25150) | 30894..31103 | + | 210 | WP_071687494.1 | hypothetical protein | - |
| HUZ88_RS25530 | 31122..31244 | + | 123 | WP_256259396.1 | hypothetical protein | - |
| HUZ88_RS25225 (HUZ88_25155) | 31681..33708 | + | 2028 | WP_163274385.1 | class I SAM-dependent DNA methyltransferase | - |
| HUZ88_RS25230 (HUZ88_25160) | 33705..35009 | + | 1305 | WP_115243221.1 | restriction endonuclease subunit S | - |
| HUZ88_RS25235 (HUZ88_25165) | 35010..38267 | + | 3258 | WP_224994887.1 | DEAD/DEAH box helicase family protein | - |
| HUZ88_RS25240 (HUZ88_25170) | 38272..39540 | + | 1269 | WP_115243222.1 | ISL3 family transposase ISKpn25 | Transposase |
| HUZ88_RS25245 (HUZ88_25175) | 39691..40176 | + | 486 | Protein_46 | antirestriction protein | - |
| HUZ88_RS25250 (HUZ88_25180) | 40187..40642 | - | 456 | WP_071687492.1 | hypothetical protein | VF |
| HUZ88_RS25255 (HUZ88_25185) | 41111..41494 | + | 384 | WP_239606580.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HUZ88_RS25260 (HUZ88_25190) | 42001..42282 | + | 282 | WP_071687490.1 | conjugal transfer protein TraJ | - |
| HUZ88_RS25265 (HUZ88_25195) | 42499..42666 | + | 168 | WP_164845037.1 | hypothetical protein | - |
| HUZ88_RS25270 (HUZ88_25200) | 42772..43131 | + | 360 | WP_071687489.1 | type IV conjugative transfer system pilin TraA | - |
| HUZ88_RS25275 (HUZ88_25205) | 43134..43439 | + | 306 | WP_071687511.1 | type IV conjugative transfer system protein TraL | - |
| HUZ88_RS25280 (HUZ88_25210) | 43459..44022 | + | 564 | WP_071687488.1 | type IV conjugative transfer system protein TraE | - |
| HUZ88_RS25285 (HUZ88_25215) | 44012..44656 | + | 645 | WP_239606581.1 | type-F conjugative transfer system secretin TraK | - |
| HUZ88_RS25290 (HUZ88_25220) | 44660..45370 | + | 711 | WP_071687464.1 | hypothetical protein | - |
| HUZ88_RS25295 (HUZ88_25225) | 45367..45675 | + | 309 | WP_071687463.1 | hypothetical protein | - |
| HUZ88_RS25300 (HUZ88_25230) | 45774..46337 | + | 564 | WP_071687462.1 | Phospholipase D | VF |
| HUZ88_RS25305 (HUZ88_25235) | 46468..46725 | + | 258 | WP_071687461.1 | replication regulatory protein RepA | - |
| HUZ88_RS25310 (HUZ88_25240) | 46958..47035 | + | 78 | WP_071687510.1 | RepA leader peptide Tap | - |
| HUZ88_RS25315 (HUZ88_25245) | 47028..48047 | + | 1020 | WP_071687460.1 | plasmid replication initiator RepA | - |
| HUZ88_RS25320 (HUZ88_25250) | 48063..48311 | - | 249 | WP_127663654.1 | hypothetical protein | - |
| HUZ88_RS25330 (HUZ88_25260) | 50073..51069 | + | 997 | Protein_63 | IS3 family transposase ISAs17 | Transposase |
| HUZ88_RS25335 (HUZ88_25265) | 51165..53078 | + | 1914 | WP_158236758.1 | putative signaling protein | VF |
| HUZ88_RS25340 (HUZ88_25270) | 53370..54074 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ88_RS25345 (HUZ88_25275) | 54126..54281 | + | 156 | Protein_66 | IS1 family transposase | - |
| HUZ88_RS25350 (HUZ88_25280) | 54878..55573 | - | 696 | WP_058670805.1 | L-ribulose-5-phosphate 4-epimerase | - |
| HUZ88_RS25355 (HUZ88_25285) | 56013..56822 | + | 810 | WP_058670806.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| HUZ88_RS25360 (HUZ88_25290) | 57099..58103 | + | 1005 | WP_058670807.1 | substrate-binding domain-containing protein | - |
| HUZ88_RS25365 (HUZ88_25295) | 58171..59685 | + | 1515 | WP_058670808.1 | Xylose import ATP-binding protein XylG | VF |
| HUZ88_RS25370 (HUZ88_25300) | 59678..60664 | + | 987 | WP_058670809.1 | ABC transporter permease | - |
| HUZ88_RS25375 (HUZ88_25305) | 60678..61724 | + | 1047 | WP_058670810.1 | ABC transporter permease | - |
| HUZ88_RS25380 (HUZ88_25310) | 61724..62617 | + | 894 | WP_058670811.1 | L-ribulose-5-phosphate 3-epimerase | - |
| HUZ88_RS25385 (HUZ88_25315) | 62614..64092 | + | 1479 | WP_058670812.1 | FGGY-family carbohydrate kinase | - |
| HUZ88_RS25390 (HUZ88_25320) | 64133..64290 | - | 158 | Protein_75 | IS1 family transposase | - |
| HUZ88_RS25395 (HUZ88_25325) | 64397..64543 | + | 147 | Protein_76 | IS1 family transposase | - |
| HUZ88_RS25400 (HUZ88_25330) | 64809..65162 | + | 354 | WP_001114073.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| HUZ88_RS25405 (HUZ88_25335) | 65210..65572 | + | 363 | WP_000783215.1 | arsenite efflux transporter metallochaperone ArsD | - |
| HUZ88_RS25410 (HUZ88_25340) | 65590..67341 | + | 1752 | WP_001556710.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| HUZ88_RS25415 (HUZ88_25345) | 67390..68679 | + | 1290 | WP_000922630.1 | arsenite efflux transporter membrane subunit ArsB | - |
| HUZ88_RS25420 (HUZ88_25350) | 68692..69117 | + | 426 | WP_000065758.1 | glutaredoxin-dependent arsenate reductase | - |
| HUZ88_RS25425 (HUZ88_25355) | 69148..69552 | - | 405 | WP_004118313.1 | ArsA-related P-loop ATPase | - |
| HUZ88_RS25430 (HUZ88_25360) | 69561..70133 | - | 573 | WP_001556711.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HUZ88_RS25435 (HUZ88_25365) | 70404..71108 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ88_RS25440 (HUZ88_25370) | 71114..71824 | + | 711 | WP_239606582.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| HUZ88_RS25445 (HUZ88_25375) | 72010..72783 | - | 774 | WP_001091224.1 | SDR family oxidoreductase | - |
| HUZ88_RS25450 (HUZ88_25380) | 72849..73550 | - | 702 | WP_008502228.1 | DsbA family oxidoreductase | - |
| HUZ88_RS25455 (HUZ88_25385) | 73616..74722 | - | 1107 | WP_006687059.1 | alkene reductase | - |
| HUZ88_RS25460 (HUZ88_25390) | 74935..75264 | + | 330 | WP_008502229.1 | thioredoxin family protein | - |
| HUZ88_RS25465 (HUZ88_25395) | 75294..75632 | - | 339 | WP_000888080.1 | carboxymuconolactone decarboxylase family protein | - |
| HUZ88_RS25470 (HUZ88_25400) | 75637..76218 | - | 582 | WP_008502230.1 | HTH-type transcriptional repressor NemR | VF |
| HUZ88_RS25475 (HUZ88_25405) | 76360..76917 | - | 558 | WP_000108589.1 | OsmC family protein | - |
| HUZ88_RS25480 (HUZ88_25410) | 77102..77329 | - | 228 | Protein_93 | recombinase family protein | - |
| HUZ88_RS25485 (HUZ88_25415) | 77364..78332 | + | 969 | WP_162754517.1 | IS5 family transposase IS903B | Transposase |
| HUZ88_RS25490 (HUZ88_25420) | 78472..79713 | - | 1242 | WP_239606583.1 | MFS transporter | - |
| HUZ88_RS25495 (HUZ88_25425) | 79768..80433 | - | 666 | WP_239606584.1 | PAS domain-containing protein | - |
| HUZ88_RS25500 (HUZ88_25430) | 80454..80834 | - | 381 | WP_113415723.1 | RidA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|