MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 46569 bp
Accession: NZ_CP055073 Location: 1..46569 Organism: Shigella flexneri strain SWHIN_97 Replicon: plasmid unnamed3
Accession: NZ_CP055073 Location: 1..46569 Organism: Shigella flexneri strain SWHIN_97 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ91_RS24420 (HUZ91_24210) | 166..870 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ91_RS24425 (HUZ91_24215) | 923..1081 | - | 159 | Protein_2 | IS3 family transposase ISAs17 | Transposase |
| HUZ91_RS24430 (HUZ91_24220) | 1476..2132 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| HUZ91_RS24435 (HUZ91_24225) | 2451..2870 | - | 420 | Protein_4 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| HUZ91_RS24440 (HUZ91_24230) | 2922..3626 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUZ91_RS24445 (HUZ91_24235) | 3901..4761 | + | 861 | WP_038976851.1 | Beta-lactamase TEM | ARG |
| HUZ91_RS24450 (HUZ91_24240) | 5160..5798 | - | 639 | WP_038976852.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HUZ91_RS24455 (HUZ91_24245) | 6084..6704 | + | 621 | WP_000864791.1 | ParA family protein | - |
| HUZ91_RS24460 (HUZ91_24250) | 6756..6986 | + | 231 | WP_000051064.1 | plasmid partition protein ParG | - |
| HUZ91_RS24465 (HUZ91_24255) | 7002..7295 | + | 294 | WP_015060510.1 | hypothetical protein | - |
| HUZ91_RS24470 (HUZ91_24260) | 7297..8265 | + | 969 | WP_077249520.1 | IS5 family transposase IS903B | Transposase |
| HUZ91_RS24475 (HUZ91_24265) | 8325..8678 | - | 354 | WP_000876434.1 | DNA distortion polypeptide 3 | - |
| HUZ91_RS24480 (HUZ91_24275) | 8815..9261 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| HUZ91_RS24485 (HUZ91_24280) | 9301..10137 | - | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| HUZ91_RS24490 (HUZ91_24285) | 11393..11644 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| HUZ91_RS24495 (HUZ91_24290) | 11634..11915 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HUZ91_RS24500 (HUZ91_24295) | 12061..12384 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| HUZ91_RS24505 (HUZ91_24300) | 12429..12674 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| HUZ91_RS24510 (HUZ91_24305) | 12664..12879 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| HUZ91_RS24515 (HUZ91_24310) | 12972..13301 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| HUZ91_RS24520 (HUZ91_24315) | 13588..13737 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| HUZ91_RS24525 (HUZ91_24320) | 13750..14022 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| HUZ91_RS24530 (HUZ91_24325) | 14349..14894 | + | 546 | WP_038976855.1 | DNA distortion polypeptide 1 | - |
| HUZ91_RS24535 (HUZ91_24330) | 14897..16054 | + | 1158 | WP_000538023.1 | DNA distortion polypeptide 2 | - |
| HUZ91_RS24540 (HUZ91_24335) | 16415..16906 | + | 492 | WP_038976853.1 | transcription termination/antitermination NusG family protein | - |
| HUZ91_RS24545 (HUZ91_24340) | 17131..17775 | + | 645 | WP_239606326.1 | Type IV secretion system protein virB1 | VF |
| HUZ91_RS24550 (HUZ91_24345) | 17759..18049 | + | 291 | WP_000921916.1 | TrbC/VirB2 family protein | - |
| HUZ91_RS24555 (HUZ91_24350) | 18073..20832 | + | 2760 | WP_000108725.1 | Type IV secretion system protein virB4 | VF |
| HUZ91_RS24560 (HUZ91_24355) | 20834..21571 | + | 738 | WP_000737859.1 | type IV secretion system protein | - |
| HUZ91_RS24565 (HUZ91_24360) | 21581..21841 | + | 261 | WP_001228869.1 | EexN family lipoprotein | - |
| HUZ91_RS24570 (HUZ91_24365) | 21853..22908 | + | 1056 | WP_000235774.1 | type IV secretion system protein | - |
| HUZ91_RS24575 (HUZ91_24370) | 23098..23820 | + | 723 | WP_000394570.1 | Type IV secretion system protein PtlE | VF |
| HUZ91_RS24580 (HUZ91_24375) | 23826..24755 | + | 930 | WP_000776689.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| HUZ91_RS24585 (HUZ91_24380) | 24752..25966 | + | 1215 | WP_001295061.1 | Type IV secretion system protein virB10 | VF |
| HUZ91_RS24590 (HUZ91_24385) | 25984..27021 | + | 1038 | WP_000217791.1 | Type IV secretion system protein PtlH | VF |
| HUZ91_RS24595 (HUZ91_24390) | 27026..28861 | + | 1836 | WP_000053826.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HUZ91_RS24600 (HUZ91_24395) | 28858..29253 | + | 396 | WP_000733627.1 | cag pathogenicity island Cag12 family protein | - |
| HUZ91_RS24605 | 29256..29588 | + | 333 | WP_000699980.1 | hypothetical protein | - |
| HUZ91_RS24610 (HUZ91_24405) | 29831..30646 | + | 816 | WP_000018321.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HUZ91_RS24615 (HUZ91_24410) | 30800..31708 | - | 909 | WP_000174819.1 | C45 family peptidase | - |
| HUZ91_RS24620 | 31855..31941 | + | 87 | Protein_41 | micrococcal nuclease | - |
| HUZ91_RS24625 (HUZ91_24420) | 32356..32601 | + | 246 | WP_001243650.1 | hypothetical protein | - |
| HUZ91_RS24630 (HUZ91_24425) | 32621..34945 | + | 2325 | WP_001235773.1 | type IA DNA topoisomerase | - |
| HUZ91_RS24635 (HUZ91_24430) | 34957..35406 | + | 450 | WP_001282381.1 | H-NS family nucleoid-associated regulatory protein | - |
| HUZ91_RS24640 (HUZ91_24435) | 35469..35873 | + | 405 | WP_000059893.1 | hypothetical protein | - |
| HUZ91_RS24645 (HUZ91_24440) | 36028..37326 | - | 1299 | Protein_46 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HUZ91_RS24650 (HUZ91_24445) | 37394..38098 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ91_RS24655 (HUZ91_24450) | 38044..39156 | - | 1113 | WP_024166810.1 | IS91 family transposase ISAzo26 | Transposase |
| HUZ91_RS24660 (HUZ91_24455) | 39312..39785 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| HUZ91_RS24665 (HUZ91_24460) | 40032..40736 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUZ91_RS24670 (HUZ91_24465) | 40903..41538 | + | 636 | WP_001253263.1 | DUF3363 domain-containing protein | - |
| HUZ91_RS24675 (HUZ91_24470) | 41755..42969 | + | 1215 | WP_038977101.1 | Bicyclomycin resistance protein | ARG |
| HUZ91_RS24680 (HUZ91_24475) | 42997..43302 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| HUZ91_RS24685 (HUZ91_24480) | 43414..43602 | + | 189 | Protein_54 | IS91 family transposase | - |
| HUZ91_RS24690 (HUZ91_24485) | 43569..44768 | - | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| HUZ91_RS24695 (HUZ91_24490) | 44874..45524 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HUZ91_RS24700 (HUZ91_24495) | 45556..45798 | - | 243 | WP_000844627.1 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|