MGE detailed information
MGE type: Genomic_island MGE length: 39333 bp
Accession: NZ_CP055070 Location: 2828150..2867482 Organism: Shigella flexneri strain SWHIN_97 Replicon: chromosome
Accession: NZ_CP055070 Location: 2828150..2867482 Organism: Shigella flexneri strain SWHIN_97 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ91_RS14010 (2823615) | 2823615..2824772 | + | 1158 | WP_001070350.1 | glucans biosynthesis protein MdoC | - |
| HUZ91_RS14015 (2824780) | 2824780..2826261 | - | 1482 | WP_001515157.1 | cardiolipin synthase ClsC | - |
| HUZ91_RS14020 (2826203) | 2826203..2826736 | - | 534 | WP_000857401.1 | O-acetyl-ADP-ribose deacetylase | - |
| HUZ91_RS14025 (2826831) | 2826831..2827142 | - | 312 | WP_000489587.1 | protein YmdA | - |
| HUZ91_RS14030 (2827263) | 2827263..2827595 | - | 333 | WP_000992837.1 | curli assembly chaperone CsgC | - |
| HUZ91_RS14035 (2827654) | 2827654..2828109 | - | 456 | WP_001741518.1 | curli major subunit CsgA | - |
| HUZ91_RS14040 (2828150) | 2828150..2828605 | - | 456 | WP_000791650.1 | Minor curlin subunit | VF |
| HUZ91_RS14045 (2829360) | 2829360..2830010 | + | 651 | WP_000481505.1 | CsgBAC operon transcriptional regulatory protein | VF |
| HUZ91_RS14050 (2830015) | 2830015..2830404 | + | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
| HUZ91_RS14055 (2830429) | 2830429..2830845 | + | 417 | WP_001264088.1 | Curli production assembly/transport component CsgF | VF |
| HUZ91_RS14060 (2830872) | 2830872..2831705 | + | 834 | WP_001189321.1 | Curli production assembly/transport component CsgG | VF |
| HUZ91_RS14065 (2831769) | 2831769..2832260 | - | 492 | WP_001300785.1 | DUF1097 domain-containing protein | - |
| HUZ91_RS14070 (2832362) | 2832362..2832916 | - | 555 | WP_033554356.1 | molecular chaperone YcdY | - |
| HUZ91_RS14075 (2832940) | 2832940..2833677 | - | 738 | WP_000283664.1 | zinc-binding phosphatase | - |
| HUZ91_RS14080 (2833732) | 2833732..2834670 | - | 939 | WP_000351315.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| HUZ91_RS14090 (2835141) | 2835141..2835983 | - | 843 | WP_065304417.1 | DUF4942 domain-containing protein | - |
| HUZ91_RS14095 (2836080) | 2836080..2836277 | - | 198 | WP_086598277.1 | DUF957 domain-containing protein | - |
| HUZ91_RS14100 (2836353) | 2836353..2836502 | - | 150 | Protein_2770 | DUF5983 family protein | - |
| HUZ91_RS14105 (2836499) | 2836499..2836876 | - | 378 | WP_065304416.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| HUZ91_RS14110 (2836966) | 2836966..2837334 | - | 369 | WP_001285390.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HUZ91_RS14115 (2837384) | 2837384..2838028 | - | 645 | WP_065304415.1 | antitoxin of toxin-antitoxin stability system | - |
| HUZ91_RS14120 (2838043) | 2838043..2838264 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| HUZ91_RS14125 (2838333) | 2838333..2838809 | - | 477 | WP_001186747.1 | RadC family protein | - |
| HUZ91_RS14130 (2838824) | 2838824..2839309 | - | 486 | WP_000214317.1 | antirestriction protein | - |
| HUZ91_RS14135 (2839400) | 2839400..2840221 | - | 822 | WP_106668205.1 | DUF932 domain-containing protein | - |
| HUZ91_RS14140 (2840442) | 2840442..2840852 | - | 411 | WP_000846713.1 | hypothetical protein | - |
| HUZ91_RS14145 (2840868) | 2840868..2841545 | - | 678 | WP_059239983.1 | hypothetical protein | - |
| HUZ91_RS14150 (2841681) | 2841681..2842751 | - | 1071 | WP_059239982.1 | patatin-like phospholipase family protein | - |
| HUZ91_RS14155 (2842748) | 2842748..2843653 | - | 906 | WP_048943270.1 | diguanylate cyclase regulator RdcB family protein | - |
| HUZ91_RS14160 (2843650) | 2843650..2846046 | - | 2397 | WP_059239980.1 | dynamin family protein | - |
| HUZ91_RS14165 (2846264) | 2846264..2847136 | - | 873 | WP_059239978.1 | GTPase family protein | - |
| HUZ91_RS14170 (2847400) | 2847400..2848956 | + | 1557 | WP_059239976.1 | type I restriction-modification system subunit M | - |
| HUZ91_RS14175 (2848953) | 2848953..2850158 | + | 1206 | WP_059239974.1 | restriction endonuclease subunit S | - |
| HUZ91_RS14180 (2850280) | 2850280..2853396 | + | 3117 | WP_106668204.1 | HsdR family type I site-specific deoxyribonuclease | - |
| HUZ91_RS14190 (2854311) | 2854311..2854712 | - | 402 | Protein_2788 | IS30 family transposase IS30D | Transposase |
| HUZ91_RS14195 (2854780) | 2854780..2855673 | + | 894 | Protein_2789 | IS3 family transposase ISEhe3 | Transposase |
| HUZ91_RS14200 (2855951) | 2855951..2857048 | - | 1098 | WP_059252017.1 | porin | - |
| HUZ91_RS14205 (2857357) | 2857357..2858337 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| HUZ91_RS14210 (2858587) | 2858587..2859000 | + | 414 | Protein_2792 | gluconate permease | - |
| HUZ91_RS14215 (2859050) | 2859050..2859745 | - | 696 | WP_065304411.1 | lactate utilization protein C | - |
| HUZ91_RS14220 (2859738) | 2859738..2861165 | - | 1428 | WP_050019109.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| HUZ91_RS14225 (2861176) | 2861176..2861895 | - | 720 | WP_001102105.1 | (Fe-S)-binding protein | - |
| HUZ91_RS14230 (2861970) | 2861970..2863667 | - | 1698 | WP_000683099.1 | D-lactate dehydrogenase | - |
| HUZ91_RS14235 (2864098) | 2864098..2865651 | + | 1554 | WP_000545263.1 | L-lactate permease | - |
| HUZ91_RS14240 (2865700) | 2865700..2865906 | + | 207 | WP_023157188.1 | hypothetical protein | - |
| HUZ91_RS14245 (2866081) | 2866081..2866389 | - | 309 | Protein_2799 | IS3 family transposase ISLad1 | Transposase |
| HUZ91_RS14250 (2866406) | 2866406..2867482 | - | 1077 | WP_000227970.1 | IS110 family transposase ISEc21 | Transposase |
| HUZ91_RS14255 (2867764) | 2867764..2867943 | - | 180 | Protein_2801 | DDE-type integrase/transposase/recombinase | - |
| HUZ91_RS14260 (2868024) | 2868024..2869241 | - | 1218 | Protein_2802 | reverse transcriptase domain-containing protein | - |
| HUZ91_RS14265 (2869231) | 2869231..2869416 | + | 186 | Protein_2803 | IS256 family transposase | - |
| HUZ91_RS14270 (2869653) | 2869653..2871149 | - | 1497 | WP_000716410.1 | carbohydrate porin | - |
| HUZ91_RS14275 (2871249) | 2871249..2872175 | - | 927 | WP_000108760.1 | aminoimidazole riboside kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|