MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 87472 bp
Accession: NZ_CP055042 Location: 1..87472 Organism: Shigella flexneri strain SWHEFF_59 Replicon: plasmid unnamed1
Accession: NZ_CP055042 Location: 1..87472 Organism: Shigella flexneri strain SWHEFF_59 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ71_RS22465 (HUZ71_22275) | 1..1011 | + | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| HUZ71_RS22470 (HUZ71_22280) | 1177..1590 | - | 414 | Protein_1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| HUZ71_RS22475 (HUZ71_22285) | 1769..2968 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| HUZ71_RS22480 (HUZ71_22290) | 2978..3166 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| HUZ71_RS22485 (HUZ71_22295) | 3359..4630 | - | 1272 | WP_000457544.1 | Y-family DNA polymerase | - |
| HUZ71_RS22490 (HUZ71_22300) | 4630..5055 | - | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HUZ71_RS22495 (HUZ71_22305) | 5507..6472 | + | 966 | WP_023281075.1 | zincin-like metallopeptidase domain-containing protein | - |
| HUZ71_RS22500 (HUZ71_22310) | 6644..6820 | + | 177 | WP_013438824.1 | hypothetical protein | - |
| HUZ71_RS22505 (HUZ71_22315) | 6958..7383 | + | 426 | WP_232046052.1 | hypothetical protein | - |
| HUZ71_RS22510 (HUZ71_22320) | 7415..7942 | - | 528 | WP_001232861.1 | Phospholipase D | VF |
| HUZ71_RS22515 (HUZ71_22325) | 7935..8681 | - | 747 | WP_000909125.1 | MobC family replication-relaxation protein | - |
| HUZ71_RS22520 (HUZ71_22330) | 8696..10603 | - | 1908 | WP_000575554.1 | type IV secretion system DNA-binding domain-containing protein | - |
| HUZ71_RS22525 (HUZ71_22335) | 11312..11704 | - | 393 | WP_001079960.1 | H-NS family nucleoid-associated regulatory protein | - |
| HUZ71_RS22530 (HUZ71_22340) | 11701..13902 | - | 2202 | WP_239638077.1 | type IA DNA topoisomerase | - |
| HUZ71_RS22535 (HUZ71_22345) | 13899..14207 | - | 309 | WP_000212005.1 | hypothetical protein | - |
| HUZ71_RS22540 (HUZ71_22350) | 14183..14518 | - | 336 | WP_000610141.1 | hypothetical protein | - |
| HUZ71_RS22545 (HUZ71_22355) | 14545..14862 | - | 318 | WP_000683352.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HUZ71_RS22550 (HUZ71_22360) | 14953..15354 | - | 402 | WP_000979494.1 | cag pathogenicity island Cag12 family protein | - |
| HUZ71_RS22555 (HUZ71_22365) | 15341..16390 | - | 1050 | WP_000342114.1 | Type IV secretion system protein VirB11 | VF |
| HUZ71_RS22560 (HUZ71_22370) | 16394..17590 | - | 1197 | WP_000980841.1 | Type IV secretion system protein virB10 | VF |
| HUZ71_RS22565 (HUZ71_22375) | 17587..18480 | - | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| HUZ71_RS22570 (HUZ71_22380) | 18473..19159 | - | 687 | WP_001293055.1 | type IV secretion system protein | - |
| HUZ71_RS22575 (HUZ71_22385) | 19152..19292 | - | 141 | WP_000873539.1 | hypothetical protein | - |
| HUZ71_RS22580 (HUZ71_22390) | 19369..20376 | - | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| HUZ71_RS22585 (HUZ71_22395) | 20394..20678 | - | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| HUZ71_RS22590 (HUZ71_22400) | 20690..21406 | - | 717 | WP_000770034.1 | type IV secretion system protein | - |
| HUZ71_RS22595 (HUZ71_22405) | 21425..24175 | - | 2751 | WP_017694776.1 | Type IV secretion system protein virB4 | VF |
| HUZ71_RS22600 (HUZ71_22410) | 24185..24484 | - | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| HUZ71_RS22605 (HUZ71_22415) | 24495..25157 | - | 663 | WP_000958205.1 | Type IV secretion system protein virB1 | VF |
| HUZ71_RS22610 (HUZ71_22420) | 25160..25375 | - | 216 | WP_001112907.1 | hypothetical protein | - |
| HUZ71_RS22615 (HUZ71_22425) | 25368..25676 | - | 309 | WP_023281068.1 | hypothetical protein | - |
| HUZ71_RS22620 (HUZ71_22430) | 25990..26904 | + | 915 | WP_000891983.1 | helix-turn-helix domain-containing protein | - |
| HUZ71_RS22625 (HUZ71_22435) | 26908..27891 | + | 984 | WP_039267228.1 | hypothetical protein | - |
| HUZ71_RS22630 (HUZ71_22440) | 27884..28372 | + | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| HUZ71_RS22635 (HUZ71_22445) | 28369..30087 | + | 1719 | WP_063116709.1 | hybrid sensor histidine kinase/response regulator | - |
| HUZ71_RS22640 (HUZ71_22450) | 30304..31008 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUZ71_RS22645 (HUZ71_22455) | 31202..31588 | + | 387 | WP_063102497.1 | bleomycin binding protein | - |
| HUZ71_RS22650 (HUZ71_22460) | 31908..32300 | - | 393 | WP_089079287.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| HUZ71_RS22655 (HUZ71_22465) | 32635..33339 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUZ71_RS22660 (HUZ71_22470) | 33980..34795 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| HUZ71_RS22665 (HUZ71_22475) | 34856..35659 | + | 804 | WP_001082320.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HUZ71_RS22670 (HUZ71_22480) | 35659..36495 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| HUZ71_RS22675 (HUZ71_22485) | 36882..37124 | + | 243 | WP_000844627.1 | transposase | - |
| HUZ71_RS22680 (HUZ71_22490) | 37166..37816 | - | 651 | WP_012850383.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HUZ71_RS22685 (HUZ71_22495) | 37922..39121 | + | 1200 | WP_025732387.1 | Tetracycline resistance protein, class C | ARG |
| HUZ71_RS22690 (HUZ71_22500) | 39052..39492 | - | 441 | WP_025732385.1 | GNAT family N-acetyltransferase | - |
| HUZ71_RS22695 (HUZ71_22505) | 39862..40903 | - | 1042 | Protein_46 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HUZ71_RS22700 (HUZ71_22510) | 41067..41624 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HUZ71_RS22705 (HUZ71_22515) | 41807..42667 | + | 861 | WP_038976851.1 | Beta-lactamase TEM | ARG |
| HUZ71_RS22710 (HUZ71_22520) | 42796..44259 | + | 1464 | Protein_49 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HUZ71_RS22715 (HUZ71_22525) | 44782..45139 | - | 358 | Protein_50 | IS1 family transposase | - |
| HUZ71_RS22720 (HUZ71_22530) | 45346..46335 | + | 990 | WP_052935737.1 | IS91 family transposase ISWz1 | Transposase |
| HUZ71_RS22725 (HUZ71_22535) | 46424..47017 | + | 594 | Protein_52 | IS4 family transposase IS186B | Transposase |
| HUZ71_RS22730 (HUZ71_22540) | 47079..47783 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUZ71_RS22735 (HUZ71_22545) | 47789..48517 | + | 729 | WP_152921961.1 | replication initiation protein | - |
| HUZ71_RS22740 (HUZ71_22550) | 49222..50658 | - | 1437 | WP_000105383.1 | glutathione synthase | - |
| HUZ71_RS22745 (HUZ71_22555) | 50925..51629 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ71_RS22750 (HUZ71_22560) | 51751..52656 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| HUZ71_RS22755 (HUZ71_22565) | 52653..53891 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| HUZ71_RS22760 (HUZ71_22570) | 53891..54475 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| HUZ71_RS22765 (HUZ71_22575) | 54968..55732 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| HUZ71_RS22770 (HUZ71_22580) | 55850..55915 | - | 66 | Protein_61 | EAL domain-containing protein | - |
| HUZ71_RS22775 (HUZ71_22585) | 55959..56264 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| HUZ71_RS22780 (HUZ71_22590) | 56275..57480 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| HUZ71_RS22785 (HUZ71_22595) | 57636..57839 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| HUZ71_RS22790 (HUZ71_22600) | 57967..58806 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| HUZ71_RS22795 (HUZ71_22605) | 58800..59147 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| HUZ71_RS22800 (HUZ71_22610) | 59264..60102 | - | 839 | Protein_67 | Streptomycin 3''-adenylyltransferase | ARG |
| HUZ71_RS22805 (HUZ71_22615) | 60108..60398 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| HUZ71_RS22810 (HUZ71_22620) | 60510..61007 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| HUZ71_RS22815 (HUZ71_22625) | 61152..62165 | + | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| HUZ71_RS22820 (HUZ71_22630) | 62368..62718 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| HUZ71_RS22825 (HUZ71_22635) | 62988..63437 | + | 450 | Protein_72 | Tn3 family transposase ISKox2 | Transposase |
| HUZ71_RS22835 (HUZ71_22645) | 64208..65752 | + | 1545 | Protein_74 | Tn3 family transposase ISKox2 | Transposase |
| HUZ71_RS22840 (HUZ71_22650) | 65820..65912 | - | 93 | Protein_75 | cysteine-rich KTR domain-containing protein | - |
| HUZ71_RS22845 (HUZ71_22655) | 66010..67929 | - | 1920 | WP_000691727.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| HUZ71_RS22850 (HUZ71_22660) | 67945..68061 | - | 117 | WP_072035752.1 | tetracycline resistance determinant leader peptide | - |
| HUZ71_RS22855 (HUZ71_22665) | 68306..68629 | - | 324 | Protein_78 | conjugal transfer protein | - |
| HUZ71_RS22860 (HUZ71_22670) | 68774..69478 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUZ71_RS22865 (HUZ71_22675) | 69677..70000 | - | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| HUZ71_RS22870 (HUZ71_22680) | 70105..71142 | + | 1038 | WP_044502555.1 | permease | - |
| HUZ71_RS22875 (HUZ71_22685) | 71435..72052 | - | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| HUZ71_RS22880 (HUZ71_22690) | 72244..73800 | - | 1557 | WP_000818556.1 | AAA family ATPase | - |
| HUZ71_RS22885 (HUZ71_22695) | 74063..74653 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| HUZ71_RS22890 (HUZ71_22700) | 74653..74910 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| HUZ71_RS22895 (HUZ71_22705) | 75264..77402 | + | 2139 | WP_000350638.1 | AAA family ATPase | - |
| HUZ71_RS22900 (HUZ71_22710) | 77564..77980 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HUZ71_RS22905 (HUZ71_22715) | 77977..78207 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| HUZ71_RS22910 (HUZ71_22720) | 78503..78793 | + | 291 | WP_000111771.1 | hypothetical protein | - |
| HUZ71_RS22915 (HUZ71_22725) | 78783..79682 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| HUZ71_RS22920 (HUZ71_22730) | 79732..81264 | - | 1533 | WP_239638078.1 | P-loop NTPase fold protein | - |
| HUZ71_RS22925 (HUZ71_22735) | 81419..81607 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| HUZ71_RS22930 (HUZ71_22740) | 81617..82816 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| HUZ71_RS22935 (HUZ71_22745) | 82993..83244 | + | 252 | WP_000181753.1 | hypothetical protein | - |
| HUZ71_RS22940 (HUZ71_22750) | 83298..83603 | + | 306 | WP_000534920.1 | hypothetical protein | - |
| HUZ71_RS22945 (HUZ71_22755) | 84595..85566 | - | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HUZ71_RS22950 (HUZ71_22760) | 85566..86732 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|