MGE detailed information
MGE type: Prophage MGE length: 91839 bp
Accession: NZ_CP055041 Location: 975050..1066888 Organism: Shigella flexneri strain SWHEFF_59 Replicon: chromosome
Accession: NZ_CP055041 Location: 975050..1066888 Organism: Shigella flexneri strain SWHEFF_59 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ71_RS04580 (970494) | 970494..972212 | - | 1719 | WP_001260707.1 | proline--tRNA ligase | - |
| HUZ71_RS04585 (972323) | 972323..973030 | - | 708 | WP_000094011.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| HUZ71_RS04590 (973027) | 973027..973431 | - | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| HUZ71_RS04595 (973549) | 973549..974364 | - | 816 | WP_000874226.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| HUZ71_RS04600 (974404) | 974404..975057 | - | 654 | WP_001294594.1 | methionine ABC transporter permease MetI | - |
| HUZ71_RS04605 (975050) | 975050..976081 | - | 1032 | WP_000594006.1 | hypothetical protein | VF |
| HUZ71_RS04610 (976269) | 976269..976844 | + | 576 | WP_001140187.1 | hypothetical protein | VF |
| HUZ71_RS04645 (982593) | 982593..983396 | + | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
| HUZ71_RS04650 (983393) | 983393..984307 | - | 915 | WP_000648572.1 | hypothetical protein | VF |
| HUZ71_RS04655 (984548) | 984548..985348 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| HUZ71_RS04660 (985379) | 985379..985975 | + | 597 | Protein_897 | methyltransferase domain-containing protein | - |
| HUZ71_RS04665 (986023) | 986023..987381 | - | 1359 | WP_000644685.1 | hypothetical protein | VF |
| HUZ71_RS04670 (987453) | 987453..988208 | - | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| HUZ71_RS04675 (988242) | 988242..988964 | + | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| HUZ71_RS04680 (988961) | 988961..989428 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| HUZ71_RS04685 (989493) | 989493..990224 | + | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| HUZ71_RS04695 (990761) | 990761..991546 | + | 786 | WP_001086141.1 | lipoprotein | - |
| HUZ71_RS04700 (991683) | 991683..992162 | - | 480 | WP_072644141.1 | protein YkfM | - |
| HUZ71_RS04705 (992172) | 992172..993086 | - | 915 | WP_000908052.1 | hypothetical protein | - |
| HUZ71_RS04710 (993130) | 993130..993612 | - | 483 | WP_001284199.1 | hypothetical protein | VF |
| HUZ71_RS04715 (993539) | 993539..994643 | - | 1105 | Protein_907 | hypothetical protein | VF |
| HUZ71_RS04720 (994640) | 994640..995182 | - | 543 | Protein_908 | IS66 family transposase ISCro1 | Transposase |
| HUZ71_RS04725 (995223) | 995223..995582 | + | 360 | WP_072644138.1 | hypothetical protein | - |
| HUZ71_RS04735 (996789) | 996789..997925 | + | 1137 | Protein_911 | ISAs1 family transposase ISEc1 | Transposase |
| HUZ71_RS04740 (997966) | 997966..998736 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| HUZ71_RS04745 (998917) | 998917..999363 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| HUZ71_RS04750 (999406) | 999406..1001850 | - | 2445 | WP_000973083.1 | hypothetical protein | VF |
| HUZ71_RS04755 (1002090) | 1002090..1002668 | + | 579 | WP_000284050.1 | hypothetical protein | VF |
| HUZ71_RS04760 (1002874) | 1002874..1003641 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| HUZ71_RS04765 (1003612) | 1003612..1004352 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| HUZ71_RS04770 (1004508) | 1004508..1004786 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| HUZ71_RS04775 (1004789) | 1004789..1005049 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| HUZ71_RS04780 (1005235) | 1005235..1006008 | + | 774 | WP_015675129.1 | hypothetical protein | VF |
| HUZ71_RS04785 (1006184) | 1006184..1006681 | + | 498 | WP_000006257.1 | REP-associated tyrosine transposase RayT | - |
| HUZ71_RS04790 (1006905) | 1006905..1008617 | - | 1713 | Protein_922 | hypothetical protein | VF |
| HUZ71_RS04795 (1008589) | 1008589..1009374 | + | 786 | WP_000207587.1 | hypothetical protein | VF |
| HUZ71_RS04800 (1009445) | 1009445..1010500 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| HUZ71_RS04805 (1010552) | 1010552..1010845 | + | 294 | WP_072644207.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HUZ71_RS04810 (1010848) | 1010848..1011246 | + | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| HUZ71_RS04815 (1011256) | 1011256..1011708 | + | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| HUZ71_RS04820 (1011954) | 1011954..1012157 | + | 204 | Protein_928 | RtcB family protein | - |
| HUZ71_RS04825 (1012156) | 1012156..1012677 | + | 522 | Protein_929 | peptide chain release factor H | - |
| HUZ71_RS04830 (1012734) | 1012734..1014191 | - | 1458 | WP_001293002.1 | cytosol nonspecific dipeptidase | - |
| HUZ71_RS04835 (1014452) | 1014452..1014910 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (1015506) | 1015506..1015586 | + | 81 | NuclAT_11 | - | - |
| - (1015506) | 1015506..1015586 | + | 81 | NuclAT_11 | - | - |
| - (1015506) | 1015506..1015586 | + | 81 | NuclAT_11 | - | - |
| - (1015506) | 1015506..1015586 | + | 81 | NuclAT_11 | - | - |
| HUZ71_RS04840 (1015002) | 1015002..1016246 | + | 1245 | WP_000189541.1 | esterase FrsA | - |
| HUZ71_RS04845 (1016304) | 1016304..1016705 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| HUZ71_RS04850 (1016744) | 1016744..1017799 | - | 1056 | WP_000749893.1 | phosphoporin PhoE | - |
| HUZ71_RS04855 (1018087) | 1018087..1019190 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| HUZ71_RS04860 (1019202) | 1019202..1020455 | + | 1254 | WP_072644208.1 | glutamate-5-semialdehyde dehydrogenase | - |
| HUZ71_RS04870 (1020660) | 1020660..1021778 | - | 1119 | WP_239638071.1 | hypothetical protein ; Integrase | Integrase |
| HUZ71_RS04875 (1021700) | 1021700..1022050 | - | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| HUZ71_RS04880 (1022050) | 1022050..1022355 | - | 306 | WP_000206732.1 | protein YfdT | - |
| HUZ71_RS04885 (1022355) | 1022355..1022717 | - | 363 | WP_001242749.1 | phage protein | - |
| HUZ71_RS04890 (1022708) | 1022708..1023010 | - | 303 | Protein_941 | 5'-deoxynucleotidase | - |
| HUZ71_RS04895 (1023145) | 1023145..1023699 | + | 555 | WP_104730506.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| HUZ71_RS04900 (1023760) | 1023760..1024533 | - | 774 | WP_000355484.1 | hypothetical protein | - |
| HUZ71_RS04905 (1025358) | 1025358..1026098 | + | 741 | WP_239638072.1 | AraC family transcriptional regulator | - |
| HUZ71_RS04910 (1026149) | 1026149..1026846 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| HUZ71_RS04915 (1026920) | 1026920..1027129 | - | 210 | Protein_946 | IS3 family transposase ISEc48 | Transposase |
| HUZ71_RS04920 (1027577) | 1027577..1028773 | + | 1197 | WP_016239421.1 | hypothetical protein ; Integrase | Integrase |
| HUZ71_RS04925 (1028995) | 1028995..1030608 | - | 1614 | WP_016239422.1 | LA2681 family HEPN domain-containing protein | - |
| HUZ71_RS04930 (1030752) | 1030752..1031708 | - | 957 | WP_239638040.1 | hypothetical protein | - |
| HUZ71_RS04935 (1031750) | 1031750..1032447 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| HUZ71_RS04940 (1032441) | 1032441..1034516 | - | 2076 | WP_239638041.1 | hypothetical protein | - |
| HUZ71_RS04945 (1034667) | 1034667..1035829 | + | 1163 | WP_085947598.1 | IS3 family transposase ISEc17 | Transposase |
| HUZ71_RS04950 (1035856) | 1035856..1036962 | + | 1107 | Protein_953 | hypothetical protein | VF |
| HUZ71_RS04955 (1037102) | 1037102..1037923 | - | 822 | WP_233396850.1 | hypothetical protein | VF |
| HUZ71_RS04960 (1038280) | 1038280..1039508 | + | 1229 | WP_116315299.1 | IS3 family transposase IS2 | Transposase |
| HUZ71_RS04965 (1039592) | 1039592..1039720 | + | 129 | Protein_956 | aldo/keto reductase | - |
| HUZ71_RS04970 (1039880) | 1039880..1040473 | - | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| HUZ71_RS04975 (1040485) | 1040485..1040721 | - | 237 | WP_000474077.1 | reactive chlorine resistance periplasmic protein RclB | - |
| HUZ71_RS04980 (1040830) | 1040830..1042155 | - | 1326 | WP_001046307.1 | reactive chlorine resistance oxidoreductase RclA | - |
| HUZ71_RS04985 (1042381) | 1042381..1043235 | + | 855 | WP_000339594.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| HUZ71_RS04990 (1043762) | 1043762..1044481 | + | 720 | WP_072644339.1 | (Fe-S)-binding protein | - |
| HUZ71_RS04995 (1044492) | 1044492..1045919 | + | 1428 | WP_000023927.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| HUZ71_RS05000 (1045912) | 1045912..1046607 | + | 696 | WP_000370307.1 | LUD domain-containing protein | - |
| HUZ71_RS05005 (1046850) | 1046850..1047518 | - | 669 | WP_001209100.1 | protein YkgH | - |
| HUZ71_RS05010 (1047731) | 1047731..1049401 | - | 1671 | WP_001159094.1 | choline dehydrogenase | - |
| HUZ71_RS05015 (1049415) | 1049415..1050887 | - | 1473 | WP_000089110.1 | betaine-aldehyde dehydrogenase | - |
| HUZ71_RS05020 (1050901) | 1050901..1051488 | - | 588 | WP_001335745.1 | transcriptional regulator BetI | - |
| HUZ71_RS05025 (1051617) | 1051617..1053650 | + | 2034 | WP_000131044.1 | choline BCCT transporter BetT | - |
| HUZ71_RS05030 (1053956) | 1053956..1054030 | + | 75 | WP_120795374.1 | protein YahV | - |
| HUZ71_RS05035 (1054525) | 1054525..1055613 | + | 1089 | WP_032181862.1 | hypothetical protein | VF |
| HUZ71_RS05040 (1055655) | 1055655..1056587 | - | 933 | WP_001084399.1 | hypothetical protein | VF |
| HUZ71_RS05045 (1056679) | 1056679..1057176 | - | 498 | WP_001013892.1 | DUF1097 domain-containing protein | - |
| HUZ71_RS05050 (1057434) | 1057434..1058038 | + | 605 | Protein_973 | hypothetical protein | VF |
| HUZ71_RS05055 (1058078) | 1058078..1058941 | + | 864 | WP_001315281.1 | DUF2877 domain-containing protein | - |
| HUZ71_RS05060 (1058931) | 1058931..1060478 | + | 1548 | WP_032181864.1 | acyl-CoA synthetase FdrA | - |
| HUZ71_RS05065 (1060478) | 1060478..1061896 | + | 1419 | WP_000083429.1 | DUF1116 domain-containing protein | - |
| HUZ71_RS05070 (1061922) | 1061922..1062242 | + | 321 | WP_001360107.1 | hypothetical protein | VF |
| HUZ71_RS05075 (1062318) | 1062318..1063268 | + | 951 | WP_000661619.1 | carbamate kinase family protein | - |
| HUZ71_RS05080 (1063278) | 1063278..1064660 | + | 1383 | WP_239638042.1 | amidohydrolase family protein | - |
| HUZ71_RS05085 (1064876) | 1064876..1064950 | + | 75 | Protein_980 | hypothetical protein | - |
| HUZ71_RS05090 (1065037) | 1065037..1066086 | + | 1050 | WP_000692754.1 | NADPH-dependent aldehyde reductase YahK | - |
| HUZ71_RS05095 (1066191) | 1066191..1066888 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| HUZ71_RS05100 (1067106) | 1067106..1067921 | + | 816 | WP_032181866.1 | protein YahL | - |
| HUZ71_RS05105 (1068334) | 1068334..1068579 | + | 246 | WP_000290616.1 | protein YahM | - |
| HUZ71_RS05110 (1068596) | 1068596..1069267 | - | 672 | WP_000983410.1 | LysE family transporter | - |
| HUZ71_RS05115 (1069414) | 1069414..1069689 | + | 276 | WP_000691956.1 | DUF1471 family periplasmic protein YahO | - |
| HUZ71_RS05120 (1069787) | 1069787..1071373 | - | 1587 | WP_000941026.1 | propionate catabolism operon regulatory protein PrpR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|