MGE detailed information
MGE type: Prophage MGE length: 63674 bp
Accession: NZ_CP055041 Location: 2341249..2404922 Organism: Shigella flexneri strain SWHEFF_59 Replicon: chromosome
Accession: NZ_CP055041 Location: 2341249..2404922 Organism: Shigella flexneri strain SWHEFF_59 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ71_RS11305 (2337352) | 2337352..2338338 | - | 987 | Protein_2204 | GGDEF domain-containing protein | - |
| HUZ71_RS11310 (2338411) | 2338411..2338770 | - | 360 | WP_001191019.1 | DUF4186 domain-containing protein | - |
| HUZ71_RS11315 (2338770) | 2338770..2339696 | - | 927 | WP_000257409.1 | glutaminase B | - |
| HUZ71_RS11320 (2339760) | 2339760..2341148 | - | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| HUZ71_RS11325 (2341249) | 2341249..2342130 | + | 882 | WP_000366501.1 | hypothetical protein | VF |
| HUZ71_RS11330 (2342208) | 2342208..2343323 | + | 1116 | Protein_2209 | putative protein YneK | - |
| HUZ71_RS11335 (2343473) | 2343473..2344663 | + | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| HUZ71_RS11340 (2344688) | 2344688..2345353 | - | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| HUZ71_RS11345 (2345565) | 2345565..2345999 | + | 435 | WP_072644432.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| HUZ71_RS11350 (2346019) | 2346019..2346402 | + | 384 | WP_000091199.1 | hypothetical protein | VF |
| HUZ71_RS11355 (2346434) | 2346434..2346652 | + | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| HUZ71_RS11360 (2346683) | 2346683..2347582 | - | 900 | WP_032182308.1 | O-acetylserine/cysteine exporter | - |
| HUZ71_RS11365 (2347777) | 2347777..2348964 | + | 1188 | WP_001054189.1 | efflux MFS transporter YdeE | - |
| HUZ71_RS11370 (2349091) | 2349091..2349186 | + | 96 | WP_000901367.1 | protein MgtS | - |
| HUZ71_RS11375 (2349186) | 2349186..2349290 | + | 105 | WP_211180496.1 | protein MgtT | - |
| HUZ71_RS11380 (2349405) | 2349405..2350295 | - | 891 | WP_000592823.1 | diguanylate cyclase DgcZ | - |
| HUZ71_RS11385 (2350550) | 2350550..2350942 | - | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| HUZ71_RS11390 (2351218) | 2351218..2351736 | + | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| HUZ71_RS11395 (2351780) | 2351780..2353825 | - | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| HUZ71_RS11400 (2353962) | 2353962..2354708 | + | 747 | WP_000636571.1 | hypothetical protein | VF |
| HUZ71_RS11405 (2354797) | 2354797..2355483 | + | 687 | WP_239637991.1 | DNA-binding transcriptional regulator rspR | - |
| HUZ71_RS11410 (2355660) | 2355660..2355863 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| HUZ71_RS11415 (2355898) | 2355898..2357358 | - | 1461 | WP_032182306.1 | mannitol dehydrogenase family protein | - |
| HUZ71_RS11420 (2357447) | 2357447..2358730 | - | 1284 | Protein_2227 | MHS family MFS transporter YdfJ | - |
| HUZ71_RS11425 (2359447) | 2359447..2359644 | + | 198 | WP_001421370.1 | hypothetical protein | - |
| HUZ71_RS11430 (2360464) | 2360464..2361033 | - | 570 | WP_239637992.1 | tail fiber assembly protein | - |
| HUZ71_RS11435 (2361171) | 2361171..2362280 | - | 1110 | Protein_2230 | phage tail protein | - |
| HUZ71_RS11440 (2362279) | 2362279..2362566 | - | 288 | Protein_2231 | phage terminase large subunit family protein | - |
| HUZ71_RS11445 (2362541) | 2362541..2363086 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| HUZ71_RS11450 (2363475) | 2363475..2363708 | + | 234 | WP_032249887.1 | YlcI/YnfO family protein | - |
| HUZ71_RS11455 (2363768) | 2363768..2364178 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| HUZ71_RS11460 (2364330) | 2364330..2364503 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| HUZ71_RS11465 (2364675) | 2364675..2364905 | - | 231 | WP_000720962.1 | protein YnfN | - |
| HUZ71_RS11470 (2364910) | 2364910..2364975 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| HUZ71_RS11475 (2364978) | 2364978..2365166 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| HUZ71_RS11480 (2365177) | 2365177..2365389 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| HUZ71_RS11485 (2365751) | 2365751..2366248 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| HUZ71_RS11490 (2366245) | 2366245..2366778 | - | 534 | WP_072644463.1 | lysozyme | - |
| HUZ71_RS11495 (2366834) | 2366834..2367148 | - | 315 | WP_001515370.1 | YdfR family protein | - |
| HUZ71_RS11500 (2367153) | 2367153..2367368 | - | 216 | WP_001515371.1 | phage lysis protein EssD | - |
| HUZ71_RS11505 (2367559) | 2367559..2368272 | - | 714 | WP_032182207.1 | hypothetical protein | VF |
| HUZ71_RS11510 (2368679) | 2368679..2368987 | - | 309 | Protein_2245 | DUF1722 domain-containing protein | - |
| HUZ71_RS11515 (2369081) | 2369081..2370309 | + | 1229 | WP_116315299.1 | IS3 family transposase IS2 | Transposase |
| HUZ71_RS11520 (2370306) | 2370306..2370974 | - | 669 | Protein_2247 | DUF523 and DUF1722 domain-containing protein | - |
| HUZ71_RS11525 (2371167) | 2371167..2371691 | + | 525 | WP_000780584.1 | lipocalin family protein | - |
| HUZ71_RS11530 (2371847) | 2371847..2372224 | - | 378 | WP_001204787.1 | antiterminator Q family protein | - |
| HUZ71_RS11535 (2372242) | 2372242..2373291 | - | 1050 | WP_032182205.1 | DUF968 domain-containing protein | - |
| HUZ71_RS11540 (2373293) | 2373293..2373571 | - | 279 | WP_001515373.1 | hypothetical protein | - |
| HUZ71_RS11545 (2373638) | 2373638..2373889 | - | 252 | WP_001463433.1 | protein Rem | - |
| HUZ71_RS11550 (2374106) | 2374106..2374261 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| HUZ71_RS11555 (2374333) | 2374333..2374620 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| HUZ71_RS11560 (2374620) | 2374620..2374859 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| HUZ71_RS11565 (2374884) | 2374884..2375189 | + | 306 | WP_071593935.1 | protein YdfV | - |
| HUZ71_RS11570 (2375392) | 2375392..2375724 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| HUZ71_RS11575 (2376161) | 2376161..2377501 | - | 1341 | WP_000589013.1 | ISNCY family transposase ISCARN112 | Transposase |
| HUZ71_RS11580 (2378270) | 2378270..2378556 | - | 287 | Protein_2259 | hypothetical protein | - |
| HUZ71_RS11585 (2379034) | 2379034..2379523 | - | 490 | Protein_2260 | class I SAM-dependent methyltransferase | - |
| HUZ71_RS11590 (2379520) | 2379520..2379942 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| HUZ71_RS11595 (2379983) | 2379983..2380948 | - | 966 | WP_000054514.1 | hypothetical protein | - |
| HUZ71_RS11600 (2380929) | 2380929..2381171 | - | 243 | Protein_2263 | hypothetical protein | - |
| HUZ71_RS11605 (2381255) | 2381255..2381443 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| HUZ71_RS11610 (2381440) | 2381440..2381631 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| HUZ71_RS11615 (2381725) | 2381725..2384196 | + | 2472 | WP_072644395.1 | exonuclease | - |
| HUZ71_RS11620 (2384269) | 2384269..2384520 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| HUZ71_RS11625 (2384555) | 2384555..2385835 | + | 1281 | WP_000876979.1 | hypothetical protein ; Integrase | Integrase |
| HUZ71_RS11630 (2386023) | 2386023..2387042 | - | 1020 | WP_000836067.1 | Zn-dependent oxidoreductase | - |
| HUZ71_RS11635 (2387054) | 2387054..2388268 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| HUZ71_RS11640 (2388474) | 2388474..2388800 | - | 327 | WP_001469615.1 | YnfA family protein | - |
| HUZ71_RS11645 (2388935) | 2388935..2389276 | + | 342 | WP_000705199.1 | DUF1283 family protein | - |
| HUZ71_RS11650 (2389311) | 2389311..2389871 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| HUZ71_RS11655 (2389874) | 2389874..2390584 | - | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| HUZ71_RS11660 (2390692) | 2390692..2390997 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| HUZ71_RS11665 (2391196) | 2391196..2393622 | + | 2427 | Protein_2276 | dimethyl sulfoxide reductase subunit A | - |
| HUZ71_RS11670 (2393683) | 2393683..2396106 | + | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| HUZ71_RS11675 (2396117) | 2396117..2396734 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| HUZ71_RS11680 (2396736) | 2396736..2397590 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| HUZ71_RS11685 (2397633) | 2397633..2398247 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| HUZ71_RS11690 (2398406) | 2398406..2399698 | + | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| HUZ71_RS11695 (2399651) | 2399651..2400346 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| HUZ71_RS11700 (2400471) | 2400471..2401691 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| HUZ71_RS11705 (2401826) | 2401826..2402719 | - | 894 | WP_001019525.1 | hypothetical protein | VF |
| HUZ71_RS11710 (2402826) | 2402826..2404079 | + | 1254 | WP_000091840.1 | MFS transporter | - |
| HUZ71_RS11720 (2405279) | 2405279..2405587 | + | 309 | WP_001340364.1 | acid resistance repetitive basic protein Asr | - |
| HUZ71_RS11725 (2405680) | 2405680..2405763 | + | 84 | WP_000233090.1 | hypothetical protein | - |
| HUZ71_RS11730 (2405863) | 2405863..2406684 | + | 822 | WP_001260865.1 | serine protease | - |
| HUZ71_RS11735 (2406723) | 2406723..2407052 | - | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| HUZ71_RS11740 (2407039) | 2407039..2407404 | - | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| HUZ71_RS11750 (2407816) | 2407816..2408850 | + | 1035 | WP_001118241.1 | AI-2 transporter TqsA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|