MGE detailed information
MGE type: Prophage MGE length: 69294 bp
Accession: NZ_CP055041 Location: 2095443..2164736 Organism: Shigella flexneri strain SWHEFF_59 Replicon: chromosome
Accession: NZ_CP055041 Location: 2095443..2164736 Organism: Shigella flexneri strain SWHEFF_59 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ71_RS10120 (2091013) | 2091013..2091777 | + | 765 | WP_001300506.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase | - |
| HUZ71_RS10125 (2091804) | 2091804..2092361 | + | 558 | WP_001278727.1 | HTH-type transcriptional regulator PuuR | - |
| HUZ71_RS10130 (2092636) | 2092636..2094123 | + | 1488 | WP_072644321.1 | aldehyde dehydrogenase PuuC | - |
| HUZ71_RS10135 (2094125) | 2094125..2095405 | + | 1281 | WP_000134870.1 | gamma-glutamylputrescine oxidase | - |
| HUZ71_RS10140 (2095443) | 2095443..2096708 | + | 1266 | WP_000069248.1 | hypothetical protein | VF |
| HUZ71_RS10145 (2096828) | 2096828..2097805 | - | 978 | WP_000852835.1 | hypothetical protein | VF |
| HUZ71_RS10150 (2097972) | 2097972..2098640 | + | 669 | WP_000511025.1 | phage shock protein PspA | - |
| HUZ71_RS10155 (2098694) | 2098694..2098918 | + | 225 | WP_001274963.1 | envelope stress response membrane protein PspB | - |
| HUZ71_RS10160 (2098918) | 2098918..2099277 | + | 360 | WP_000907387.1 | envelope stress response membrane protein PspC | - |
| HUZ71_RS10165 (2099286) | 2099286..2099507 | + | 222 | WP_001400279.1 | phage shock protein PspD | - |
| HUZ71_RS10170 (2099582) | 2099582..2099896 | + | 315 | WP_072644319.1 | thiosulfate sulfurtransferase PspE | - |
| HUZ71_RS10175 (2100109) | 2100109..2101788 | + | 1680 | WP_000810500.1 | glucosylglycerate phosphorylase | - |
| HUZ71_RS10180 (2101802) | 2101802..2101904 | + | 103 | Protein_1978 | carbohydrate ABC transporter substrate-binding protein | - |
| HUZ71_RS10190 (2102645) | 2102645..2102947 | + | 303 | Protein_1980 | TOBE domain-containing protein | - |
| HUZ71_RS10195 (2102992) | 2102992..2103897 | + | 906 | WP_000735257.1 | monomeric porin OmpG | - |
| HUZ71_RS10200 (2104008) | 2104008..2105006 | - | 999 | WP_000075375.1 | LacI family DNA-binding transcriptional regulator | - |
| HUZ71_RS10205 (2105162) | 2105162..2106559 | + | 1398 | WP_000825775.1 | YcjX family protein | - |
| HUZ71_RS10210 (2106556) | 2106556..2107617 | + | 1062 | WP_000138728.1 | YcjF family protein | - |
| HUZ71_RS10215 (2107765) | 2107765..2109306 | + | 1542 | WP_001300658.1 | hypothetical protein | VF |
| HUZ71_RS10220 (2109350) | 2109350..2109856 | - | 507 | WP_000084387.1 | thiol peroxidase | - |
| HUZ71_RS10225 (2109975) | 2109975..2110940 | + | 966 | WP_001295588.1 | L-Ala-D/L-Glu epimerase | - |
| HUZ71_RS10230 (2110915) | 2110915..2111643 | - | 729 | WP_000219122.1 | murein tripeptide amidase MpaA | - |
| HUZ71_RS10235 (2111770) | 2111770..2111907 | - | 138 | Protein_1989 | NAD-dependent dehydratase | - |
| HUZ71_RS10240 (2111978) | 2111978..2112898 | - | 921 | WP_239638067.1 | alpha/beta hydrolase | - |
| HUZ71_RS10245 (2113036) | 2113036..2113935 | + | 900 | WP_000817708.1 | hypothetical protein | VF |
| HUZ71_RS10250 (2114272) | 2114272..2115885 | + | 1614 | WP_000683020.1 | murein tripeptide ABC transporter substrate-binding protein MppA | - |
| HUZ71_RS10255 (2115936) | 2115936..2116967 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| HUZ71_RS10260 (2117211) | 2117211..2117468 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| HUZ71_RS10265 (2117518) | 2117518..2118468 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| HUZ71_RS10270 (2118620) | 2118620..2119372 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| HUZ71_RS10275 (2119567) | 2119567..2120082 | - | 516 | WP_000945011.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| HUZ71_RS10280 (2120093) | 2120093..2121619 | - | 1527 | WP_000062967.1 | p-aminobenzoyl-glutamate transporter | - |
| HUZ71_RS10285 (2121653) | 2121653..2123098 | - | 1446 | WP_072644374.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| HUZ71_RS10290 (2123098) | 2123098..2124408 | - | 1311 | WP_000444929.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| HUZ71_RS10295 (2124584) | 2124584..2125492 | + | 909 | WP_072644372.1 | LysR family transcriptional regulator | - |
| HUZ71_RS10300 (2125822) | 2125822..2126385 | + | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| HUZ71_RS10305 (2126406) | 2126406..2127638 | - | 1233 | WP_000628058.1 | diguanylate cyclase DgcM | - |
| HUZ71_RS10310 (2127832) | 2127832..2127879 | + | 48 | WP_211180494.1 | protein YnaN | - |
| HUZ71_RS10315 (2127893) | 2127893..2128876 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| HUZ71_RS23395 (2129151) | 2129151..2129324 | + | 174 | WP_001296046.1 | protein YnaL | - |
| HUZ71_RS10320 (2129354) | 2129354..2130727 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| HUZ71_RS10325 (2130822) | 2130822..2131519 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| HUZ71_RS10330 (2131633) | 2131633..2132568 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| HUZ71_RS10335 (2132620) | 2132620..2133855 | - | 1236 | WP_000040852.1 | hypothetical protein ; Integrase | Integrase |
| HUZ71_RS10340 (2133857) | 2133857..2134072 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (2134176) | 2134176..2134354 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2134176) | 2134176..2134354 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2134176) | 2134176..2134354 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2134176) | 2134176..2134354 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| HUZ71_RS10345 (2134151) | 2134151..2134360 | - | 210 | WP_072644107.1 | double-strand break reduction protein RcbA | - |
| HUZ71_RS10350 (2134353) | 2134353..2134547 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| HUZ71_RS10355 (2134604) | 2134604..2135413 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| HUZ71_RS10360 (2135406) | 2135406..2138006 | - | 2601 | WP_072644104.1 | exodeoxyribonuclease VIII | - |
| HUZ71_RS10365 (2138108) | 2138108..2138383 | - | 276 | WP_000632297.1 | protein RacC | - |
| HUZ71_RS10370 (2138458) | 2138458..2138628 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| HUZ71_RS10375 (2138628) | 2138628..2138849 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| HUZ71_RS10380 (2139291) | 2139291..2139779 | + | 489 | WP_001324055.1 | superinfection exclusion B family protein | - |
| HUZ71_RS10385 (2139776) | 2139776..2139931 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| HUZ71_RS10390 (2139942) | 2139942..2140121 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| HUZ71_RS10395 (2140364) | 2140364..2140783 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| HUZ71_RS10400 (2140863) | 2140863..2141117 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| HUZ71_RS10405 (2141114) | 2141114..2141536 | + | 423 | WP_000693803.1 | toxin YdaT family protein | - |
| HUZ71_RS10410 (2141614) | 2141614..2142402 | + | 789 | WP_001396581.1 | hypothetical protein | - |
| HUZ71_RS10415 (2142409) | 2142409..2143155 | + | 747 | Protein_2026 | ATP-binding protein | - |
| HUZ71_RS10420 (2143178) | 2143178..2143939 | + | 762 | WP_024250660.1 | DUF1627 domain-containing protein | - |
| HUZ71_RS10425 (2143955) | 2143955..2144377 | + | 423 | WP_072644105.1 | DUF977 family protein | - |
| HUZ71_RS10430 (2144766) | 2144766..2146133 | + | 1368 | WP_001703208.1 | hypothetical protein | - |
| HUZ71_RS10435 (2146804) | 2146804..2147142 | - | 339 | WP_000149055.1 | DUF1971 domain-containing protein | - |
| HUZ71_RS10440 (2147956) | 2147956..2148555 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| HUZ71_RS10445 (2148555) | 2148555..2148845 | + | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| HUZ71_RS10450 (2148842) | 2148842..2149384 | + | 543 | WP_000640161.1 | DUF1133 family protein | - |
| HUZ71_RS10455 (2150597) | 2150597..2150857 | + | 261 | Protein_2034 | cell envelope integrity protein TolA | - |
| HUZ71_RS10460 (2151029) | 2151029..2151403 | + | 375 | WP_001348108.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| HUZ71_RS10465 (2151655) | 2151655..2151870 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| HUZ71_RS10470 (2151870) | 2151870..2152367 | + | 498 | WP_001135310.1 | lysozyme RrrD | - |
| HUZ71_RS10475 (2152364) | 2152364..2152828 | + | 465 | WP_001082755.1 | lysis protein | - |
| HUZ71_RS10485 (2154302) | 2154302..2155759 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| HUZ71_RS10490 (2155897) | 2155897..2156688 | + | 792 | WP_001291094.1 | ParB/Srx family N-terminal domain-containing protein | - |
| HUZ71_RS10495 (2156681) | 2156681..2156932 | + | 252 | Protein_2042 | hypothetical protein | - |
| HUZ71_RS10500 (2156880) | 2156880..2157113 | + | 234 | Protein_2043 | glutamate 5-kinase | - |
| HUZ71_RS10505 (2157106) | 2157106..2157240 | + | 135 | Protein_2044 | protein YdaY | - |
| HUZ71_RS10510 (2157348) | 2157348..2157548 | + | 201 | WP_001755909.1 | hypothetical protein | - |
| HUZ71_RS10515 (2157714) | 2157714..2160947 | + | 3234 | WP_072644037.1 | phage tail tape measure protein | - |
| HUZ71_RS10520 (2160940) | 2160940..2161278 | + | 339 | WP_000024051.1 | phage tail protein | - |
| HUZ71_RS10525 (2161278) | 2161278..2161976 | + | 699 | WP_001152432.1 | phage minor tail protein L | - |
| HUZ71_RS10530 (2161982) | 2161982..2162116 | + | 135 | Protein_2049 | phage tail protein | - |
| HUZ71_RS10535 (2162133) | 2162133..2162660 | - | 528 | WP_001681074.1 | tail fiber assembly protein | - |
| HUZ71_RS10540 (2162664) | 2162664..2163626 | - | 963 | WP_001171282.1 | hypothetical protein | - |
| HUZ71_RS10545 (2163731) | 2163731..2163925 | + | 195 | WP_072644038.1 | recombinase family protein | - |
| HUZ71_RS10550 (2163953) | 2163953..2164048 | + | 96 | Protein_2053 | tail fiber assembly protein | - |
| HUZ71_RS10555 (2164146) | 2164146..2164736 | - | 591 | WP_000086518.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| HUZ71_RS10560 (2165053) | 2165053..2165286 | - | 234 | WP_000836772.1 | cold shock protein YdfK | - |
| HUZ71_RS10565 (2165355) | 2165355..2165468 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| HUZ71_RS10570 (2165808) | 2165808..2165951 | + | 144 | WP_001348156.1 | hypothetical protein | - |
| HUZ71_RS10575 (2166246) | 2166246..2166680 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| HUZ71_RS10580 (2166821) | 2166821..2167953 | - | 1133 | Protein_2059 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|