MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 72259 bp
Accession: NZ_CP055039 Location: 1..72259 Organism: Shigella flexneri strain SWHEFF_60 Replicon: plasmid unnamed2
Accession: NZ_CP055039 Location: 1..72259 Organism: Shigella flexneri strain SWHEFF_60 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ72_RS23770 (HUZ72_23575) | 1..1011 | + | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| HUZ72_RS23775 (HUZ72_23580) | 1177..2724 | - | 1548 | Protein_1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| HUZ72_RS23780 (HUZ72_23585) | 3091..4299 | + | 1209 | WP_053884015.1 | MFS transporter | - |
| HUZ72_RS23785 (HUZ72_23590) | 4466..4954 | + | 489 | WP_015060468.1 | isochorismatase family protein | - |
| HUZ72_RS23790 (HUZ72_23595) | 5111..5857 | + | 747 | WP_052935596.1 | LysO family transporter | - |
| HUZ72_RS23795 (HUZ72_23600) | 5834..8800 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HUZ72_RS23800 (HUZ72_23605) | 8804..9364 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| HUZ72_RS23805 (HUZ72_23610) | 9540..9890 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| HUZ72_RS23810 (HUZ72_23615) | 10093..11106 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| HUZ72_RS23815 (HUZ72_23620) | 11254..11751 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| HUZ72_RS23820 (HUZ72_23625) | 11863..12153 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| HUZ72_RS23825 (HUZ72_23630) | 12159..12997 | + | 839 | Protein_11 | Streptomycin 3''-adenylyltransferase | ARG |
| HUZ72_RS23830 (HUZ72_23635) | 13188..13820 | - | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| HUZ72_RS23835 (HUZ72_23640) | 13843..14118 | + | 276 | WP_109023896.1 | hypothetical protein | - |
| HUZ72_RS23840 (HUZ72_23645) | 14121..14912 | - | 792 | WP_239637563.1 | Dihydropteroate synthase | ARG |
| HUZ72_RS23845 (HUZ72_23650) | 15381..15626 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| HUZ72_RS23850 (HUZ72_23655) | 15664..16527 | - | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| HUZ72_RS23855 (HUZ72_23660) | 16673..16930 | - | 258 | Protein_17 | hypothetical protein | - |
| HUZ72_RS23860 (HUZ72_23665) | 16985..17689 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ72_RS23865 (HUZ72_23670) | 17714..19270 | + | 1557 | WP_053897648.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| HUZ72_RS23870 (HUZ72_23675) | 19462..20253 | + | 792 | Protein_20 | IS5 family transposase IS903 | Transposase |
| HUZ72_RS23875 (HUZ72_23680) | 20311..20394 | - | 84 | Protein_21 | SOS response-associated peptidase | - |
| HUZ72_RS23880 (HUZ72_23685) | 20842..21123 | + | 282 | WP_224732584.1 | Tn3 family transposase | - |
| HUZ72_RS23885 (HUZ72_23690) | 21322..22326 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| HUZ72_RS23890 (HUZ72_23695) | 22744..24180 | - | 1437 | WP_000105383.1 | glutathione synthase | - |
| HUZ72_RS23895 (HUZ72_23700) | 24447..25151 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUZ72_RS23900 (HUZ72_23705) | 25288..25569 | - | 282 | WP_000220561.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HUZ72_RS23905 (HUZ72_23710) | 25559..25810 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| HUZ72_RS23910 (HUZ72_23715) | 26686..27555 | + | 870 | WP_001212191.1 | replication initiation protein | - |
| HUZ72_RS23915 (HUZ72_23720) | 27560..28411 | + | 852 | WP_000435059.1 | replication initiation protein | - |
| HUZ72_RS23920 (HUZ72_23725) | 28415..28861 | + | 447 | WP_001074378.1 | hypothetical protein | - |
| HUZ72_RS23925 (HUZ72_23735) | 28998..29351 | + | 354 | WP_024156393.1 | DNA distortion polypeptide 3 | - |
| HUZ72_RS23930 (HUZ72_23740) | 29889..30953 | - | 1065 | WP_000849600.1 | P-loop NTPase | - |
| HUZ72_RS23935 (HUZ72_23745) | 31377..31607 | - | 231 | WP_000051066.1 | plasmid partition protein ParG | - |
| HUZ72_RS23940 (HUZ72_23750) | 31659..32279 | - | 621 | WP_000864788.1 | ParA family protein | - |
| HUZ72_RS23945 (HUZ72_23755) | 32574..33218 | + | 645 | WP_000203205.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HUZ72_RS23950 (HUZ72_23760) | 33367..33450 | - | 84 | WP_000565612.1 | damage-inducible type I toxin DinQ | - |
| HUZ72_RS23960 (HUZ72_23770) | 35380..35703 | - | 324 | WP_001175593.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| HUZ72_RS23965 (HUZ72_23775) | 35809..36942 | + | 1134 | WP_063120614.1 | permease | - |
| HUZ72_RS23970 (HUZ72_23780) | 37070..37474 | - | 405 | Protein_40 | recombinase family protein | - |
| HUZ72_RS23975 (HUZ72_23785) | 37642..39300 | + | 1659 | Protein_41 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| HUZ72_RS23980 (HUZ72_23790) | 39336..41033 | - | 1698 | Protein_42 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HUZ72_RS23985 (HUZ72_23795) | 41064..42815 | - | 1752 | Protein_43 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HUZ72_RS23990 (HUZ72_23800) | 42819..43211 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| HUZ72_RS23995 (HUZ72_23805) | 43349..44233 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| HUZ72_RS24000 (HUZ72_23810) | 44265..45464 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| HUZ72_RS24005 (HUZ72_23815) | 45570..46220 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HUZ72_RS24010 (HUZ72_23820) | 46252..46494 | - | 243 | WP_000844627.1 | transposase | - |
| HUZ72_RS24015 (HUZ72_23825) | 46657..47202 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| HUZ72_RS24020 (HUZ72_23830) | 47339..47911 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| HUZ72_RS24025 (HUZ72_23835) | 47948..49339 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| HUZ72_RS24030 (HUZ72_23840) | 49372..49800 | + | 429 | Protein_52 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| HUZ72_RS24035 (HUZ72_23845) | 50119..50775 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| HUZ72_RS24040 (HUZ72_23850) | 51170..51786 | + | 617 | Protein_54 | transposase | - |
| HUZ72_RS24045 (HUZ72_23855) | 51853..52557 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ72_RS24050 (HUZ72_23860) | 52610..53407 | + | 798 | Protein_56 | Tn3 family transposase TnpA_IS3000 | Transposase |
| HUZ72_RS24055 (HUZ72_23865) | 53509..53970 | + | 462 | WP_198478452.1 | DMT family transporter | - |
| HUZ72_RS24060 (HUZ72_23870) | 53972..54145 | + | 174 | Protein_58 | IS6 family transposase IS6100 | Transposase |
| HUZ72_RS24065 (HUZ72_23875) | 54285..54350 | - | 66 | Protein_59 | EAL domain-containing protein | - |
| HUZ72_RS24070 (HUZ72_23880) | 54365..54712 | - | 348 | WP_038988888.1 | hypothetical protein | - |
| HUZ72_RS24075 (HUZ72_23885) | 54709..54858 | - | 150 | WP_160177685.1 | hypothetical protein | - |
| HUZ72_RS24080 (HUZ72_23890) | 54937..56046 | - | 1110 | WP_192003887.1 | hypothetical protein | - |
| HUZ72_RS24085 (HUZ72_23895) | 56118..59123 | - | 3006 | WP_001143775.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HUZ72_RS24090 (HUZ72_23900) | 59285..59842 | + | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HUZ72_RS24095 (HUZ72_23905) | 60025..60885 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| HUZ72_RS24100 (HUZ72_23910) | 61032..61934 | + | 903 | Protein_66 | TCR/Tet family MFS transporter | - |
| HUZ72_RS24105 (HUZ72_23915) | 61901..62089 | - | 189 | Protein_67 | IS91 family transposase | - |
| HUZ72_RS24110 (HUZ72_23920) | 62300..62524 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| HUZ72_RS24115 (HUZ72_23925) | 62521..63258 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HUZ72_RS24120 (HUZ72_23930) | 63744..63884 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| HUZ72_RS24125 (HUZ72_23935) | 63890..64594 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ72_RS24130 (HUZ72_23940) | 64641..65597 | - | 957 | WP_239637562.1 | zincin-like metallopeptidase domain-containing protein | - |
| HUZ72_RS24135 (HUZ72_23945) | 66049..66474 | + | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HUZ72_RS24140 (HUZ72_23950) | 66474..67745 | + | 1272 | WP_000457544.1 | Y-family DNA polymerase | - |
| HUZ72_RS24145 (HUZ72_23955) | 67824..68075 | + | 252 | WP_000181753.1 | hypothetical protein | - |
| HUZ72_RS24150 (HUZ72_23960) | 68129..68434 | + | 306 | WP_000534920.1 | hypothetical protein | - |
| HUZ72_RS24155 (HUZ72_23965) | 69382..70353 | - | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HUZ72_RS24160 (HUZ72_23970) | 70353..71519 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|