MGE detailed information
MGE type: Genomic_island MGE length: 10410 bp
Accession: NZ_CP055030 Location: 4085571..4095980 Organism: Shigella flexneri strain SWHEFF_64 Replicon: chromosome
Accession: NZ_CP055030 Location: 4085571..4095980 Organism: Shigella flexneri strain SWHEFF_64 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ74_RS19860 (4081084) | 4081084..4082316 | - | 1233 | WP_001137015.1 | multidrug efflux MFS transporter MdtM | - |
| HUZ74_RS19865 (4082783) | 4082783..4083739 | + | 957 | WP_001406770.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| HUZ74_RS19870 (4083982) | 4083982..4085394 | - | 1413 | WP_001751983.1 | PLP-dependent aminotransferase family protein | - |
| HUZ74_RS19875 (4085571) | 4085571..4085735 | + | 165 | WP_001593927.1 | DUF1127 domain-containing protein | - |
| HUZ74_RS19880 (4085832) | 4085832..4086077 | + | 246 | Protein_3907 | DUF262 domain-containing protein | - |
| HUZ74_RS19885 (4086134) | 4086134..4086831 | + | 698 | WP_223369285.1 | IS1 family transposase IS1A | Transposase |
| HUZ74_RS19890 (4086936) | 4086936..4087079 | + | 144 | Protein_3909 | HNH endonuclease | - |
| HUZ74_RS19895 (4087713) | 4087713..4088501 | - | 789 | WP_032161357.1 | helix-turn-helix domain-containing protein | - |
| HUZ74_RS19900 (4088618) | 4088618..4088893 | - | 276 | WP_001683517.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HUZ74_RS19905 (4088897) | 4088897..4089145 | - | 249 | WP_024187601.1 | ribbon-helix-helix domain-containing protein | - |
| HUZ74_RS19910 (4089222) | 4089222..4090055 | - | 834 | WP_032250394.1 | DUF4942 domain-containing protein | - |
| HUZ74_RS19915 (4090170) | 4090170..4090511 | - | 342 | WP_032161355.1 | TA system toxin CbtA family protein | Toxin Detail |
| HUZ74_RS19920 (4090542) | 4090542..4090877 | - | 336 | WP_032161354.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HUZ74_RS19925 (4090877) | 4090877..4091350 | - | 474 | WP_032161353.1 | DNA repair protein RadC | - |
| HUZ74_RS19930 (4091380) | 4091380..4092198 | - | 819 | WP_001683514.1 | DUF932 domain-containing protein | - |
| HUZ74_RS19935 (4092434) | 4092434..4092913 | - | 480 | WP_239594486.1 | hypothetical protein | - |
| HUZ74_RS19945 (4093706) | 4093706..4094158 | + | 453 | WP_152925145.1 | hypothetical protein | - |
| HUZ74_RS19950 (4094382) | 4094382..4095362 | - | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| HUZ74_RS19955 (4096050) | 4096050..4096928 | - | 879 | WP_032161343.1 | HNH endonuclease | - |
| HUZ74_RS19960 (4097133) | 4097133..4098398 | - | 1266 | WP_032161342.1 | integrase arm-type DNA-binding domain-containing protein | - |
| HUZ74_RS19970 (4098865) | 4098865..4099884 | + | 1020 | WP_001300770.1 | NADPH-dependent aldehyde reductase Ahr | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|