MGE detailed information
MGE type: Genomic_island MGE length: 23218 bp
Accession: NZ_CP055030 Location: 3698289..3721506 Organism: Shigella flexneri strain SWHEFF_64 Replicon: chromosome
Accession: NZ_CP055030 Location: 3698289..3721506 Organism: Shigella flexneri strain SWHEFF_64 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ74_RS17960 (3693792) | 3693792..3694193 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3694911) | 3694911..3694991 | - | 81 | NuclAT_9 | - | - |
| - (3694911) | 3694911..3694991 | - | 81 | NuclAT_9 | - | - |
| - (3694911) | 3694911..3694991 | - | 81 | NuclAT_9 | - | - |
| - (3694911) | 3694911..3694991 | - | 81 | NuclAT_9 | - | - |
| HUZ74_RS17965 (3694251) | 3694251..3695495 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| HUZ74_RS17970 (3695587) | 3695587..3696045 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| HUZ74_RS17975 (3696306) | 3696306..3697763 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| HUZ74_RS17980 (3697820) | 3697820..3698341 | - | 522 | Protein_3535 | peptide chain release factor H | - |
| HUZ74_RS17985 (3698340) | 3698340..3698543 | - | 204 | Protein_3536 | RtcB family protein | - |
| HUZ74_RS17990 (3698789) | 3698789..3699241 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| HUZ74_RS17995 (3699251) | 3699251..3699649 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| HUZ74_RS18000 (3699652) | 3699652..3699945 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| HUZ74_RS18005 (3699997) | 3699997..3701052 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| HUZ74_RS18010 (3701123) | 3701123..3701908 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| HUZ74_RS18015 (3701880) | 3701880..3703592 | + | 1713 | Protein_3542 | hypothetical protein | VF |
| HUZ74_RS18020 (3703816) | 3703816..3704313 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| HUZ74_RS18025 (3704489) | 3704489..3705262 | - | 774 | WP_015675129.1 | hypothetical protein | VF |
| HUZ74_RS18030 (3705448) | 3705448..3705708 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| HUZ74_RS18035 (3705711) | 3705711..3705989 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| HUZ74_RS18040 (3706145) | 3706145..3706885 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| HUZ74_RS18045 (3706856) | 3706856..3707623 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| HUZ74_RS18050 (3707829) | 3707829..3708407 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| HUZ74_RS18055 (3708647) | 3708647..3711091 | + | 2445 | WP_000973083.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| HUZ74_RS18060 (3711134) | 3711134..3711580 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| HUZ74_RS18065 (3711761) | 3711761..3712531 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| HUZ74_RS18075 (3713636) | 3713636..3713896 | - | 261 | WP_024195397.1 | hypothetical protein | - |
| HUZ74_RS18080 (3713993) | 3713993..3714238 | + | 246 | Protein_3555 | IS3 family transposase ISEhe3 | Transposase |
| HUZ74_RS18085 (3714306) | 3714306..3715457 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| HUZ74_RS18090 (3715464) | 3715464..3716359 | + | 896 | Protein_3557 | IS3 family transposase ISSd1 | Transposase |
| HUZ74_RS18095 (3716472) | 3716472..3716906 | - | 435 | WP_000723071.1 | hypothetical protein | - |
| HUZ74_RS18100 (3717124) | 3717124..3718524 | - | 1401 | WP_001211180.1 | copper resistance membrane spanning protein PcoS | - |
| HUZ74_RS18105 (3718521) | 3718521..3719201 | - | 681 | WP_001188930.1 | Regulator of RpoS | VF |
| HUZ74_RS18110 (3719256) | 3719256..3720185 | - | 930 | WP_000998778.1 | copper resistance inner membrane protein PcoD | - |
| HUZ74_RS18115 (3720190) | 3720190..3720570 | - | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| HUZ74_RS18120 (3720610) | 3720610..3721500 | - | 891 | WP_185695703.1 | copper resistance outer membrane transporter PcoB | - |
| HUZ74_RS18125 (3721506) | 3721506..3723323 | - | 1818 | WP_124846279.1 | multicopper oxidase PcoA | - |
| HUZ74_RS18130 (3723558) | 3723558..3724007 | + | 450 | WP_001023257.1 | copper resistance protein | - |
| HUZ74_RS18135 (3724296) | 3724296..3725033 | + | 738 | WP_000287502.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| HUZ74_RS18140 (3725067) | 3725067..3725264 | - | 198 | WP_000843494.1 | DUF2933 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|