MGE detailed information
MGE type: Genomic_island MGE length: 72249 bp
Accession: NZ_CP055030 Location: 3524266..3596514 Organism: Shigella flexneri strain SWHEFF_64 Replicon: chromosome
Accession: NZ_CP055030 Location: 3524266..3596514 Organism: Shigella flexneri strain SWHEFF_64 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ74_RS17075 (3519519) | 3519519..3519827 | + | 309 | WP_000763151.1 | YaiY family protein | - |
| HUZ74_RS17080 (3519886) | 3519886..3520980 | - | 1095 | WP_000092069.1 | surface-exposed outer membrane lipoprotein YaiW | - |
| HUZ74_RS17085 (3520993) | 3520993..3522213 | - | 1221 | WP_000477009.1 | peptide antibiotic transporter SbmA | - |
| HUZ74_RS17090 (3522565) | 3522565..3523722 | + | 1158 | WP_000830738.1 | D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH | - |
| HUZ74_RS17095 (3523723) | 3523723..3524178 | - | 456 | Protein_3358 | helix-turn-helix domain-containing protein | - |
| HUZ74_RS17100 (3524233) | 3524233..3524930 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| HUZ74_RS17105 (3524947) | 3524947..3525123 | - | 177 | Protein_3360 | transcriptional regulator | - |
| HUZ74_RS17110 (3525211) | 3525211..3528174 | - | 2964 | Protein_3361 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| HUZ74_RS17120 (3529505) | 3529505..3529945 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| HUZ74_RS17125 (3529942) | 3529942..3530190 | + | 249 | WP_000747845.1 | hypothetical protein | - |
| HUZ74_RS17130 (3530227) | 3530227..3530655 | - | 429 | WP_239594480.1 | hypothetical protein | - |
| HUZ74_RS17135 (3530709) | 3530709..3531689 | + | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| HUZ74_RS17140 (3531790) | 3531790..3532410 | - | 621 | WP_152925144.1 | hypothetical protein | - |
| HUZ74_RS17145 (3532401) | 3532401..3533105 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUZ74_RS17150 (3533275) | 3533275..3534264 | - | 990 | WP_227449570.1 | glycosyltransferase family 2 protein | - |
| HUZ74_RS17155 (3534270) | 3534270..3534647 | - | 378 | WP_205962630.1 | hypothetical protein | - |
| HUZ74_RS17160 (3534629) | 3534629..3535609 | - | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| HUZ74_RS17165 (3535655) | 3535655..3536674 | - | 1020 | WP_144246108.1 | hypothetical protein | - |
| HUZ74_RS17170 (3536916) | 3536916..3540755 | - | 3840 | WP_077264744.1 | Ubiquinone biosynthesis O-methyltransferase | VF |
| HUZ74_RS17175 (3540745) | 3540745..3542091 | - | 1347 | WP_124846302.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| HUZ74_RS17180 (3542081) | 3542081..3542833 | - | 753 | WP_077264745.1 | ABC transporter permease | - |
| HUZ74_RS17185 (3542946) | 3542946..3543884 | - | 939 | WP_032663235.1 | hypothetical protein | VF |
| HUZ74_RS17190 (3543889) | 3543889..3544437 | - | 549 | WP_048223992.1 | hypothetical protein | VF |
| HUZ74_RS17195 (3544453) | 3544453..3545343 | - | 891 | WP_032663233.1 | dTDP-4-dehydrorhamnose reductase | - |
| HUZ74_RS17200 (3545367) | 3545367..3546239 | - | 873 | WP_032664078.1 | Glucose-1-phosphate adenylyltransferase | VF |
| HUZ74_RS17205 (3546253) | 3546253..3547341 | - | 1089 | WP_032663232.1 | GDP-L-fucose synthase | VF |
| HUZ74_RS17210 (3547722) | 3547722..3548426 | - | 705 | WP_205962632.1 | IS6 family transposase IS15DI | Transposase |
| HUZ74_RS17215 (3548896) | 3548896..3549138 | + | 243 | WP_124846308.1 | DNA-binding protein | - |
| HUZ74_RS17220 (3549203) | 3549203..3549604 | - | 402 | WP_152925133.1 | hypothetical protein | - |
| HUZ74_RS17225 (3549597) | 3549597..3550133 | - | 537 | WP_124846306.1 | toll/interleukin-1 receptor domain-containing protein | - |
| HUZ74_RS17230 (3550295) | 3550295..3552118 | - | 1824 | WP_124846305.1 | DUF2142 domain-containing protein | - |
| HUZ74_RS17235 (3552131) | 3552131..3552535 | - | 405 | WP_112022432.1 | GtrA family protein | - |
| HUZ74_RS17240 (3552532) | 3552532..3553536 | - | 1005 | WP_112022431.1 | glycosyltransferase family 2 protein | - |
| HUZ74_RS17245 (3553676) | 3553676..3554380 | - | 705 | Protein_3388 | IS5 family transposase IS903B | Transposase |
| HUZ74_RS17250 (3554446) | 3554446..3555150 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUZ74_RS17255 (3555096) | 3555096..3556907 | - | 1812 | WP_239594481.1 | AAA family ATPase | - |
| HUZ74_RS17260 (3557261) | 3557261..3557518 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| HUZ74_RS17265 (3557518) | 3557518..3558108 | + | 591 | WP_000194575.1 | hypothetical protein | - |
| HUZ74_RS17270 (3558371) | 3558371..3559927 | + | 1557 | WP_000818556.1 | AAA family ATPase | - |
| HUZ74_RS17275 (3560119) | 3560119..3560736 | + | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| HUZ74_RS17280 (3561029) | 3561029..3562162 | - | 1134 | WP_058650130.1 | permease | - |
| HUZ74_RS17285 (3562268) | 3562268..3562591 | + | 324 | WP_001175593.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| HUZ74_RS17290 (3562692) | 3562692..3563402 | + | 711 | WP_057102336.1 | arsenical resistance protein ArsH | - |
| HUZ74_RS17295 (3563478) | 3563478..3565397 | - | 1920 | Protein_3398 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| HUZ74_RS17300 (3565497) | 3565497..3566201 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUZ74_RS17305 (3566260) | 3566260..3566706 | + | 447 | WP_239594482.1 | hypothetical protein | - |
| HUZ74_RS17310 (3566868) | 3566868..3567284 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HUZ74_RS17315 (3567281) | 3567281..3567511 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| HUZ74_RS17320 (3567807) | 3567807..3568079 | + | 273 | WP_061602529.1 | hypothetical protein | - |
| HUZ74_RS17325 (3568126) | 3568126..3568830 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUZ74_RS17330 (3568883) | 3568883..3569476 | + | 594 | Protein_3405 | class A beta-lactamase | - |
| HUZ74_RS17335 (3569509) | 3569509..3569943 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| HUZ74_RS17340 (3570015) | 3570015..3570365 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| HUZ74_RS17345 (3570379) | 3570379..3570654 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| HUZ74_RS17350 (3570690) | 3570690..3571112 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| HUZ74_RS17355 (3571164) | 3571164..3572858 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| HUZ74_RS17360 (3572876) | 3572876..3573238 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| HUZ74_RS17365 (3573235) | 3573235..3573471 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| HUZ74_RS17370 (3573507) | 3573507..3574175 | + | 669 | WP_001300294.1 | hypothetical protein | VF |
| HUZ74_RS17375 (3574250) | 3574250..3575500 | + | 1251 | Protein_3414 | hypothetical protein ; Integrase | Integrase |
| HUZ74_RS17380 (3575565) | 3575565..3576269 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ74_RS17385 (3576459) | 3576459..3577274 | - | 816 | WP_000018329.1 | hypothetical protein | ARG |
| HUZ74_RS17390 (3577425) | 3577425..3578129 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUZ74_RS17395 (3578184) | 3578184..3578441 | + | 258 | Protein_3418 | hypothetical protein | - |
| HUZ74_RS17400 (3578587) | 3578587..3579450 | + | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| HUZ74_RS17405 (3579488) | 3579488..3579733 | + | 246 | WP_001354008.1 | GrpB family protein | - |
| HUZ74_RS17410 (3580202) | 3580202..3580993 | + | 792 | WP_000034420.1 | hypothetical protein | ARG |
| HUZ74_RS17415 (3580996) | 3580996..3581271 | - | 276 | WP_109023896.1 | hypothetical protein | - |
| HUZ74_RS17420 (3581294) | 3581294..3581926 | + | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| HUZ74_RS17425 (3582173) | 3582173..3582505 | - | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| HUZ74_RS17430 (3582628) | 3582628..3583466 | - | 839 | Protein_3425 | hypothetical protein | ARG |
| HUZ74_RS17435 (3583559) | 3583559..3584818 | - | 1260 | WP_000095725.1 | Multidrug resistance protein MdtL | ARG |
| HUZ74_RS17440 (3585033) | 3585033..3585871 | - | 839 | Protein_3427 | hypothetical protein | ARG |
| HUZ74_RS17445 (3585877) | 3585877..3586167 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| HUZ74_RS17450 (3586279) | 3586279..3586776 | - | 498 | WP_001083725.1 | hypothetical protein | ARG |
| HUZ74_RS17455 (3586921) | 3586921..3587934 | + | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| HUZ74_RS17460 (3588137) | 3588137..3588487 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| HUZ74_RS17465 (3588663) | 3588663..3589223 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| HUZ74_RS17470 (3589227) | 3589227..3592193 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HUZ74_RS17475 (3592251) | 3592251..3592493 | + | 243 | WP_000844627.1 | transposase | - |
| HUZ74_RS17480 (3592525) | 3592525..3593175 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HUZ74_RS17485 (3593281) | 3593281..3594480 | + | 1200 | WP_000804064.1 | Multidrug resistance protein MdtG | ARG |
| HUZ74_RS17490 (3594512) | 3594512..3594748 | - | 237 | Protein_3437 | EamA family transporter | - |
| HUZ74_RS17495 (3594798) | 3594798..3595502 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HUZ74_RS17500 (3595566) | 3595566..3595835 | - | 270 | Protein_3439 | IS3 family transposase | - |
| HUZ74_RS17505 (3595837) | 3595837..3596709 | - | 873 | Protein_3440 | IS3 family transposase ISEc31 | Transposase |
| HUZ74_RS17510 (3596726) | 3596726..3597130 | - | 405 | Protein_3441 | IS1-like element IS1B family transposase | - |
| HUZ74_RS17520 (3598913) | 3598913..3599887 | + | 975 | WP_001295337.1 | porphobilinogen synthase | - |
| HUZ74_RS17525 (3599993) | 3599993..3600844 | - | 852 | WP_000004024.1 | taurine dioxygenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|